RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 DUOX1Q9NRD9 1551 aa17.24■□□□□ 0.35
SHMT1P1-201ENST00000419974 WTIPA6NIX2 430 aaPredicted RBP17.23■□□□□ 0.35
SHMT1P1-201ENST00000419974 UFL1O94874 794 aa17.23■□□□□ 0.35
SHMT1P1-201ENST00000419974 MAP4K4O95819 1239 aaPredicted RBP17.23■□□□□ 0.35
SHMT1P1-201ENST00000419974 GYG1P46976 350 aa17.23■□□□□ 0.35
SHMT1P1-201ENST00000419974 RBM25P49756 843 aaKnown RBP17.23■□□□□ 0.35
SHMT1P1-201ENST00000419974 FKBP4Q02790 459 aaKnown RBP eCLIP17.23■□□□□ 0.35
SHMT1P1-201ENST00000419974 DPP8Q6V1X1 898 aaPredicted RBP17.23■□□□□ 0.35
SHMT1P1-201ENST00000419974 VPS37DQ86XT2 251 aa17.23■□□□□ 0.35
SHMT1P1-201ENST00000419974 RTKN2Q8IZC4 609 aa17.23■□□□□ 0.35
SHMT1P1-201ENST00000419974 EYA3Q99504 573 aa17.23■□□□□ 0.35
SHMT1P1-201ENST00000419974 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.23■□□□□ 0.35
SHMT1P1-201ENST00000419974 HELLSQ9NRZ9 838 aa17.23■□□□□ 0.35
SHMT1P1-201ENST00000419974 DIAPH3Q9NSV4 1193 aa17.23■□□□□ 0.35
SHMT1P1-201ENST00000419974 UBE3CQ15386 1083 aa17.22■□□□□ 0.35
SHMT1P1-201ENST00000419974 TXNRD3Q86VQ6 643 aa17.22■□□□□ 0.35
SHMT1P1-201ENST00000419974 SUPT20HQ8NEM7 779 aa17.22■□□□□ 0.35
SHMT1P1-201ENST00000419974 IL27Q8NEV9 243 aa17.22■□□□□ 0.35
SHMT1P1-201ENST00000419974 IL17RAQ96F46 866 aa17.22■□□□□ 0.35
SHMT1P1-201ENST00000419974 TBC1D32Q96NH3 1257 aa17.22■□□□□ 0.35
SHMT1P1-201ENST00000419974 PSMD1Q99460 953 aa17.22■□□□□ 0.35
SHMT1P1-201ENST00000419974 COA1Q9GZY4 146 aa17.22■□□□□ 0.35
SHMT1P1-201ENST00000419974 RNF113AO15541 343 aaKnown RBP17.21■□□□□ 0.35
SHMT1P1-201ENST00000419974 KLRK1P26718 216 aa17.21■□□□□ 0.35
SHMT1P1-201ENST00000419974 ZGPATQ8N5A5 531 aaKnown RBP17.21■□□□□ 0.35
SHMT1P1-201ENST00000419974 EDC3Q96F86 508 aaKnown RBP17.21■□□□□ 0.35
SHMT1P1-201ENST00000419974 USP26Q9BXU7 913 aa17.21■□□□□ 0.35
SHMT1P1-201ENST00000419974 ANTXR1Q9H6X2 564 aa17.21■□□□□ 0.35
SHMT1P1-201ENST00000419974 ZMYM1Q5SVZ6 1142 aa17.21■□□□□ 0.34
SHMT1P1-201ENST00000419974 CD209Q9NNX6 404 aa17.21■□□□□ 0.34
SHMT1P1-201ENST00000419974 SLX4Q8IY92 1834 aa17.2■□□□□ 0.34
SHMT1P1-201ENST00000419974 ADD2P35612 726 aa17.2■□□□□ 0.34
SHMT1P1-201ENST00000419974 MFAP1P55081 439 aaKnown RBP17.2■□□□□ 0.34
SHMT1P1-201ENST00000419974 MAP3K12Q12852 859 aa17.2■□□□□ 0.34
SHMT1P1-201ENST00000419974 MCMDC2Q4G0Z9 681 aa17.2■□□□□ 0.34
SHMT1P1-201ENST00000419974 CCDC93Q567U6 631 aa17.2■□□□□ 0.34
SHMT1P1-201ENST00000419974 PI16Q6UXB8 463 aa17.2■□□□□ 0.34
SHMT1P1-201ENST00000419974 WDR66Q8TBY9 1149 aa17.2■□□□□ 0.34
SHMT1P1-201ENST00000419974 ZC3H12CQ9C0D7 883 aaKnown RBP17.2■□□□□ 0.34
SHMT1P1-201ENST00000419974 RBM19Q9Y4C8 960 aaKnown RBP17.2■□□□□ 0.34
SHMT1P1-201ENST00000419974 FAM205AQ6ZU69 1335 aa17.19■□□□□ 0.34
SHMT1P1-201ENST00000419974 COL1A1P02452 1464 aaPredicted RBP17.19■□□□□ 0.34
SHMT1P1-201ENST00000419974 C6orf229H3BNL8 230 aa17.19■□□□□ 0.34
SHMT1P1-201ENST00000419974 WASHC4Q2M389 1173 aa17.19■□□□□ 0.34
SHMT1P1-201ENST00000419974 C9orf131Q5VYM1 1079 aa17.19■□□□□ 0.34
SHMT1P1-201ENST00000419974 CWC27Q6UX04 472 aaKnown RBP17.19■□□□□ 0.34
SHMT1P1-201ENST00000419974 PODNQ7Z5L7 613 aa17.19■□□□□ 0.34
SHMT1P1-201ENST00000419974 APPBP2Q92624 585 aa17.19■□□□□ 0.34
SHMT1P1-201ENST00000419974 PIH1D3Q9NQM4 214 aaKnown RBP17.19■□□□□ 0.34
SHMT1P1-201ENST00000419974 SUGT1Q9Y2Z0 365 aa17.19■□□□□ 0.34
SHMT1P1-201ENST00000419974 NDUFB9Q9Y6M9 179 aa17.19■□□□□ 0.34
SHMT1P1-201ENST00000419974 AK9Q5TCS8 1911 aa17.18■□□□□ 0.34
SHMT1P1-201ENST00000419974 TCRBV5S4A2TA0A5A2 114 aa17.18■□□□□ 0.34
SHMT1P1-201ENST00000419974 KIAA2012Q0VF49 1180 aa17.18■□□□□ 0.34
SHMT1P1-201ENST00000419974 NMIQ13287 307 aaPredicted RBP17.18■□□□□ 0.34
SHMT1P1-201ENST00000419974 SLC51AQ86UW1 340 aa17.18■□□□□ 0.34
SHMT1P1-201ENST00000419974 TBC1D22AQ8WUA7 517 aa17.18■□□□□ 0.34
SHMT1P1-201ENST00000419974 FAM227BQ96M60 508 aa17.18■□□□□ 0.34
SHMT1P1-201ENST00000419974 C22orf23Q9BZE7 217 aa17.18■□□□□ 0.34
SHMT1P1-201ENST00000419974 DOCK2Q92608 1830 aa17.17■□□□□ 0.34
SHMT1P1-201ENST00000419974 A0A0D9SFI3 127 aa17.17■□□□□ 0.34
SHMT1P1-201ENST00000419974 FKBP1AP62942 108 aaKnown RBP17.17■□□□□ 0.34
SHMT1P1-201ENST00000419974 SPTY2D1Q68D10 685 aaPredicted RBP17.17■□□□□ 0.34
SHMT1P1-201ENST00000419974 LSG1Q9H089 658 aaKnown RBP17.17■□□□□ 0.34
SHMT1P1-201ENST00000419974 IL25Q9H293 177 aa17.17■□□□□ 0.34
SHMT1P1-201ENST00000419974 LTBP3Q9NS15 1303 aa17.16■□□□□ 0.34
SHMT1P1-201ENST00000419974 ZC3H4Q9UPT8 1303 aaKnown RBP17.16■□□□□ 0.34
SHMT1P1-201ENST00000419974 PDE6AP16499 860 aa17.16■□□□□ 0.34
SHMT1P1-201ENST00000419974 ANAPC15P60006 121 aa17.16■□□□□ 0.34
SHMT1P1-201ENST00000419974 SLC9C2Q5TAH2 1124 aa17.16■□□□□ 0.34
SHMT1P1-201ENST00000419974 MAP4K1Q92918 833 aa17.16■□□□□ 0.34
SHMT1P1-201ENST00000419974 KCNB2Q92953 911 aa17.16■□□□□ 0.34
SHMT1P1-201ENST00000419974 SBF1O95248 1867 aa17.15■□□□□ 0.34
SHMT1P1-201ENST00000419974 C21orf2O43822 256 aa17.15■□□□□ 0.34
SHMT1P1-201ENST00000419974 OLFM4Q6UX06 510 aa17.15■□□□□ 0.34
SHMT1P1-201ENST00000419974 KIAA1211Q6ZU35 1233 aa17.15■□□□□ 0.34
SHMT1P1-201ENST00000419974 ZNF526Q8TF50 670 aaPredicted RBP17.15■□□□□ 0.34
SHMT1P1-201ENST00000419974 RPAP1Q9BWH6 1393 aaPredicted RBP17.14■□□□□ 0.33
SHMT1P1-201ENST00000419974 CCDC171Q6TFL3 1326 aa17.14■□□□□ 0.33
SHMT1P1-201ENST00000419974 KIF3CO14782 793 aa17.14■□□□□ 0.33
SHMT1P1-201ENST00000419974 FRAT2O75474 233 aaPredicted RBP17.14■□□□□ 0.33
SHMT1P1-201ENST00000419974 IDH1O75874 414 aaKnown RBP17.14■□□□□ 0.33
SHMT1P1-201ENST00000419974 LMNB1P20700 586 aa17.14■□□□□ 0.33
SHMT1P1-201ENST00000419974 OSBP2Q969R2 916 aa17.14■□□□□ 0.33
SHMT1P1-201ENST00000419974 DSCC1Q9BVC3 393 aa17.14■□□□□ 0.33
SHMT1P1-201ENST00000419974 RNF181Q9P0P0 153 aa17.14■□□□□ 0.33
SHMT1P1-201ENST00000419974 LRP2BPQ9P2M1 347 aa17.14■□□□□ 0.33
SHMT1P1-201ENST00000419974 HSPA4P34932 840 aa17.13■□□□□ 0.33
SHMT1P1-201ENST00000419974 ERICH6Q7L0X2 663 aa17.13■□□□□ 0.33
SHMT1P1-201ENST00000419974 CERS3Q8IU89 383 aa17.13■□□□□ 0.33
SHMT1P1-201ENST00000419974 NSUN4Q96CB9 384 aaKnown RBP17.13■□□□□ 0.33
SHMT1P1-201ENST00000419974 FAM163AQ96GL9 167 aaPredicted RBP17.13■□□□□ 0.33
SHMT1P1-201ENST00000419974 MRIQ9BWK5 157 aa17.13■□□□□ 0.33
SHMT1P1-201ENST00000419974 ANO2Q9NQ90 1003 aa17.13■□□□□ 0.33
SHMT1P1-201ENST00000419974 MAST3O60307 1309 aa17.12■□□□□ 0.33
SHMT1P1-201ENST00000419974 ZNF532Q9HCE3 1301 aa17.12■□□□□ 0.33
SHMT1P1-201ENST00000419974 TSGA10IPQ3SY00 556 aa17.12■□□□□ 0.33
SHMT1P1-201ENST00000419974 ZNF589Q86UQ0 364 aaPredicted RBP17.12■□□□□ 0.33
SHMT1P1-201ENST00000419974 ZMYM6O95789 1325 aa17.11■□□□□ 0.33
SHMT1P1-201ENST00000419974 NFKBIEO00221 500 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms