RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 RASSF10A6NK89 507 aa25.31■■□□□ 1.64
GTF3A-202ENST00000419181 SRGAP3O43295 1099 aa25.31■■□□□ 1.64
GTF3A-202ENST00000419181 CELF2O95319 508 aaKnown RBP25.31■■□□□ 1.64
GTF3A-202ENST00000419181 ANGEL2Q5VTE6 544 aaKnown RBP25.31■■□□□ 1.64
GTF3A-202ENST00000419181 ADM5C9JUS6 153 aa25.3■■□□□ 1.64
GTF3A-202ENST00000419181 CAVIN4Q5BKX8 364 aa25.3■■□□□ 1.64
GTF3A-202ENST00000419181 DLK2Q6UY11 383 aa25.3■■□□□ 1.64
GTF3A-202ENST00000419181 HDAC9Q9UKV0 1011 aa25.3■■□□□ 1.64
GTF3A-202ENST00000419181 JAG2Q9Y219 1238 aa25.3■■□□□ 1.64
GTF3A-202ENST00000419181 WNT10BO00744 389 aa25.29■■□□□ 1.64
GTF3A-202ENST00000419181 IFIT1P09914 478 aaKnown RBP25.29■■□□□ 1.64
GTF3A-202ENST00000419181 IL15P40933 162 aaPredicted RBP25.29■■□□□ 1.64
GTF3A-202ENST00000419181 NBPF9Q3BBW0 867 aa25.29■■□□□ 1.64
GTF3A-202ENST00000419181 VPS37DQ86XT2 251 aa25.29■■□□□ 1.64
GTF3A-202ENST00000419181 SULF1Q8IWU6 871 aa25.29■■□□□ 1.64
GTF3A-202ENST00000419181 PITPNM2Q9BZ72 1349 aa25.29■■□□□ 1.64
GTF3A-202ENST00000419181 ITPRIPQ8IWB1 547 aa25.28■■□□□ 1.64
GTF3A-202ENST00000419181 LPIN2Q92539 896 aa25.28■■□□□ 1.64
GTF3A-202ENST00000419181 CEP126Q9P2H0 1117 aa25.28■■□□□ 1.64
GTF3A-202ENST00000419181 TLL2Q9Y6L7 1015 aa25.28■■□□□ 1.64
GTF3A-202ENST00000419181 HSPA1AP0DMV8 641 aaKnown RBP25.27■■□□□ 1.64
GTF3A-202ENST00000419181 HSPA1BP0DMV9 641 aaKnown RBP25.27■■□□□ 1.64
GTF3A-202ENST00000419181 SLC5A1P13866 664 aa25.27■■□□□ 1.64
GTF3A-202ENST00000419181 VEGFBP49765 207 aa25.27■■□□□ 1.64
GTF3A-202ENST00000419181 BCAMP50895 628 aa25.27■■□□□ 1.64
GTF3A-202ENST00000419181 DEFB115Q30KQ5 88 aa25.27■■□□□ 1.64
GTF3A-202ENST00000419181 ZBED3Q96IU2 234 aaPredicted RBP25.27■■□□□ 1.64
GTF3A-202ENST00000419181 ZNF408Q9H9D4 720 aa25.27■■□□□ 1.64
GTF3A-202ENST00000419181 MFSD14BQ5SR56 506 aa25.26■■□□□ 1.63
GTF3A-202ENST00000419181 IQSEC3Q9UPP2 1182 aaPredicted RBP25.26■■□□□ 1.63
GTF3A-202ENST00000419181 MYH13Q9UKX3 1938 aa25.25■■□□□ 1.63
GTF3A-202ENST00000419181 PNMA6EA0A0J9YXQ4 647 aa25.25■■□□□ 1.63
GTF3A-202ENST00000419181 ZBTB7BO15156 539 aaPredicted RBP25.25■■□□□ 1.63
GTF3A-202ENST00000419181 ATP2B3Q16720 1220 aa25.25■■□□□ 1.63
GTF3A-202ENST00000419181 SAPCD2Q86UD0 394 aa25.25■■□□□ 1.63
GTF3A-202ENST00000419181 RCAN3Q9UKA8 241 aa25.25■■□□□ 1.63
GTF3A-202ENST00000419181 ECM29Q5VYK3 1845 aa25.25■■□□□ 1.63
GTF3A-202ENST00000419181 F8W031 263 aaPredicted RBP25.24■■□□□ 1.63
GTF3A-202ENST00000419181 MTMR14Q8NCE2 650 aa25.24■■□□□ 1.63
GTF3A-202ENST00000419181 PANK1Q8TE04 598 aa25.24■■□□□ 1.63
GTF3A-202ENST00000419181 PAXIP1Q6ZW49 1069 aaPredicted RBP25.23■■□□□ 1.63
GTF3A-202ENST00000419181 CDCA5Q96FF9 252 aa25.23■■□□□ 1.63
GTF3A-202ENST00000419181 FRAT2O75474 233 aaPredicted RBP25.22■■□□□ 1.63
GTF3A-202ENST00000419181 DLGAP5Q15398 846 aa25.22■■□□□ 1.63
GTF3A-202ENST00000419181 THSD7BQ9C0I4 1608 aa25.22■■□□□ 1.63
GTF3A-202ENST00000419181 MS4A1P11836 297 aa25.21■■□□□ 1.63
GTF3A-202ENST00000419181 CHAF1AQ13111 956 aaPredicted RBP25.21■■□□□ 1.63
GTF3A-202ENST00000419181 CFAP100Q494V2 611 aa25.21■■□□□ 1.63
GTF3A-202ENST00000419181 TBC1D22AQ8WUA7 517 aa25.21■■□□□ 1.63
GTF3A-202ENST00000419181 HHIPL1Q96JK4 782 aa25.21■■□□□ 1.63
GTF3A-202ENST00000419181 C1orf115Q9H7X2 142 aa25.21■■□□□ 1.63
GTF3A-202ENST00000419181 SCAF8Q9UPN6 1271 aaKnown RBP25.21■■□□□ 1.63
GTF3A-202ENST00000419181 WDR33Q9C0J8 1336 aaKnown RBP25.2■■□□□ 1.62
GTF3A-202ENST00000419181 POLA2Q14181 598 aa25.2■■□□□ 1.62
GTF3A-202ENST00000419181 GBA2Q9HCG7 927 aaPredicted RBP25.2■■□□□ 1.62
GTF3A-202ENST00000419181 TTF2Q9UNY4 1162 aaKnown RBP25.2■■□□□ 1.62
GTF3A-202ENST00000419181 PCDHAC2Q9Y5I4 1007 aa25.2■■□□□ 1.62
GTF3A-202ENST00000419181 SPDYE2BA6NHP3 402 aa25.19■■□□□ 1.62
GTF3A-202ENST00000419181 SPDYE6P0CI01 402 aa25.19■■□□□ 1.62
GTF3A-202ENST00000419181 ATP8B2P98198 1209 aa25.19■■□□□ 1.62
GTF3A-202ENST00000419181 TFCP2Q12800 502 aa25.19■■□□□ 1.62
GTF3A-202ENST00000419181 SSH3Q8TE77 659 aa25.19■■□□□ 1.62
GTF3A-202ENST00000419181 COL1A1P02452 1464 aaPredicted RBP25.19■■□□□ 1.62
GTF3A-202ENST00000419181 GRM1Q13255 1194 aa25.18■■□□□ 1.62
GTF3A-202ENST00000419181 GRIK5Q16478 980 aa25.18■■□□□ 1.62
GTF3A-202ENST00000419181 CYP4F22Q6NT55 531 aa25.18■■□□□ 1.62
GTF3A-202ENST00000419181 APOBEC3FQ8IUX4 373 aaKnown RBP25.18■■□□□ 1.62
GTF3A-202ENST00000419181 CAPNS2Q96L46 248 aa25.18■■□□□ 1.62
GTF3A-202ENST00000419181 SERPINA10Q9UK55 444 aa25.18■■□□□ 1.62
GTF3A-202ENST00000419181 ECE1P42892 770 aa25.17■■□□□ 1.62
GTF3A-202ENST00000419181 C2orf69Q8N8R5 385 aa25.17■■□□□ 1.62
GTF3A-202ENST00000419181 PRMT6Q96LA8 375 aaPredicted RBP25.17■■□□□ 1.62
GTF3A-202ENST00000419181 AKAP2Q9Y2D5 859 aa25.17■■□□□ 1.62
GTF3A-202ENST00000419181 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.17■■□□□ 1.62
GTF3A-202ENST00000419181 PAPPA2Q9BXP8 1791 aa25.16■■□□□ 1.62
GTF3A-202ENST00000419181 ADORA1P30542 326 aa25.16■■□□□ 1.62
GTF3A-202ENST00000419181 HUNKP57058 714 aa25.16■■□□□ 1.62
GTF3A-202ENST00000419181 IFFO2Q5TF58 517 aa25.16■■□□□ 1.62
GTF3A-202ENST00000419181 AIDAQ96BJ3 306 aa25.16■■□□□ 1.62
GTF3A-202ENST00000419181 AOX1Q06278 1338 aa25.15■■□□□ 1.62
GTF3A-202ENST00000419181 A0A1B0GUL7 405 aa25.15■■□□□ 1.62
GTF3A-202ENST00000419181 ZBTB22O15209 634 aa25.15■■□□□ 1.62
GTF3A-202ENST00000419181 MYO1BO43795 1136 aa25.15■■□□□ 1.62
GTF3A-202ENST00000419181 PHKA1P46020 1223 aa25.15■■□□□ 1.62
GTF3A-202ENST00000419181 RBM5P52756 815 aaKnown RBP eCLIP25.15■■□□□ 1.62
GTF3A-202ENST00000419181 TIMM10P62072 90 aa25.15■■□□□ 1.62
GTF3A-202ENST00000419181 G3BP1Q13283 466 aaKnown RBP eCLIP25.15■■□□□ 1.62
GTF3A-202ENST00000419181 MVPQ14764 893 aaKnown RBP25.15■■□□□ 1.62
GTF3A-202ENST00000419181 COL13A1Q5TAT6 717 aaPredicted RBP25.15■■□□□ 1.62
GTF3A-202ENST00000419181 GNL3LQ9NVN8 582 aaKnown RBP25.15■■□□□ 1.62
GTF3A-202ENST00000419181 SUGT1Q9Y2Z0 365 aa25.15■■□□□ 1.62
GTF3A-202ENST00000419181 SEMA3EO15041 775 aa25.14■■□□□ 1.62
GTF3A-202ENST00000419181 PRAMEF18Q5VWM3 479 aa25.14■■□□□ 1.62
GTF3A-202ENST00000419181 CCDC102BQ68D86 513 aa25.14■■□□□ 1.62
GTF3A-202ENST00000419181 WDR66Q8TBY9 1149 aa25.14■■□□□ 1.62
GTF3A-202ENST00000419181 CRKP46108 304 aa25.13■■□□□ 1.61
GTF3A-202ENST00000419181 FKBP1BP68106 108 aa25.13■■□□□ 1.61
GTF3A-202ENST00000419181 HDLBPQ00341 1268 aaKnown RBP25.13■■□□□ 1.61
GTF3A-202ENST00000419181 CLRN2A0PK11 232 aa25.12■■□□□ 1.61
GTF3A-202ENST00000419181 CEP85Q6P2H3 762 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms