RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 TRIM27P14373 513 aa20.59■□□□□ 0.89
LINC00404-201ENST00000418660 CDCA5Q96FF9 252 aa20.59■□□□□ 0.89
LINC00404-201ENST00000418660 POLR2AP24928 1970 aaKnown RBP20.58■□□□□ 0.89
LINC00404-201ENST00000418660 GNAI3P08754 354 aa20.58■□□□□ 0.89
LINC00404-201ENST00000418660 FBXO33Q7Z6M2 555 aa20.58■□□□□ 0.89
LINC00404-201ENST00000418660 C2orf69Q8N8R5 385 aa20.58■□□□□ 0.89
LINC00404-201ENST00000418660 GBA2Q9HCG7 927 aaPredicted RBP20.58■□□□□ 0.89
LINC00404-201ENST00000418660 FBXO3Q9UK99 471 aa20.58■□□□□ 0.89
LINC00404-201ENST00000418660 HUNKP57058 714 aa20.57■□□□□ 0.88
LINC00404-201ENST00000418660 GRM1Q13255 1194 aa20.57■□□□□ 0.88
LINC00404-201ENST00000418660 CAVIN4Q5BKX8 364 aa20.57■□□□□ 0.88
LINC00404-201ENST00000418660 ZBED3Q96IU2 234 aaPredicted RBP20.57■□□□□ 0.88
LINC00404-201ENST00000418660 WBP1LQ9NX94 342 aa20.57■□□□□ 0.88
LINC00404-201ENST00000418660 FGFR2P21802 821 aa20.56■□□□□ 0.88
LINC00404-201ENST00000418660 MAP2K1Q02750 393 aaPredicted RBP20.56■□□□□ 0.88
LINC00404-201ENST00000418660 PUM3Q15397 648 aaKnown RBP20.56■□□□□ 0.88
LINC00404-201ENST00000418660 VPS37DQ86XT2 251 aa20.56■□□□□ 0.88
LINC00404-201ENST00000418660 MTMR14Q8NCE2 650 aa20.56■□□□□ 0.88
LINC00404-201ENST00000418660 AIDAQ96BJ3 306 aa20.56■□□□□ 0.88
LINC00404-201ENST00000418660 TNNQ9UQP3 1299 aa20.56■□□□□ 0.88
LINC00404-201ENST00000418660 JAG2Q9Y219 1238 aa20.56■□□□□ 0.88
LINC00404-201ENST00000418660 CIAO1O76071 339 aa20.55■□□□□ 0.88
LINC00404-201ENST00000418660 MAP2K2P36507 400 aa20.55■□□□□ 0.88
LINC00404-201ENST00000418660 DLGAP5Q15398 846 aa20.55■□□□□ 0.88
LINC00404-201ENST00000418660 ZKSCAN2Q63HK3 967 aa20.55■□□□□ 0.88
LINC00404-201ENST00000418660 ATG9AQ7Z3C6 839 aa20.55■□□□□ 0.88
LINC00404-201ENST00000418660 THSD7BQ9C0I4 1608 aa20.55■□□□□ 0.88
LINC00404-201ENST00000418660 F8W031 263 aaPredicted RBP20.54■□□□□ 0.88
LINC00404-201ENST00000418660 FOXN1O15353 648 aa20.54■□□□□ 0.88
LINC00404-201ENST00000418660 IFIT1P09914 478 aaKnown RBP20.54■□□□□ 0.88
LINC00404-201ENST00000418660 MFSD14BQ5SR56 506 aa20.54■□□□□ 0.88
LINC00404-201ENST00000418660 CLUAP1Q96AJ1 413 aa20.54■□□□□ 0.88
LINC00404-201ENST00000418660 AOC2O75106 756 aa20.53■□□□□ 0.88
LINC00404-201ENST00000418660 COL13A1Q5TAT6 717 aaPredicted RBP20.53■□□□□ 0.88
LINC00404-201ENST00000418660 APOBEC3FQ8IUX4 373 aaKnown RBP20.53■□□□□ 0.88
LINC00404-201ENST00000418660 LPIN2Q92539 896 aa20.53■□□□□ 0.88
LINC00404-201ENST00000418660 SIL1Q9H173 461 aa20.53■□□□□ 0.88
LINC00404-201ENST00000418660 COPRSQ9NQ92 184 aa20.53■□□□□ 0.88
LINC00404-201ENST00000418660 SCAF8Q9UPN6 1271 aaKnown RBP20.53■□□□□ 0.88
LINC00404-201ENST00000418660 SLC5A1P13866 664 aa20.52■□□□□ 0.88
LINC00404-201ENST00000418660 BCAMP50895 628 aa20.52■□□□□ 0.88
LINC00404-201ENST00000418660 FKBP1BP68106 108 aa20.52■□□□□ 0.88
LINC00404-201ENST00000418660 CFAP100Q494V2 611 aa20.52■□□□□ 0.88
LINC00404-201ENST00000418660 RGMBQ6NW40 437 aa20.52■□□□□ 0.88
LINC00404-201ENST00000418660 CEP126Q9P2H0 1117 aa20.52■□□□□ 0.88
LINC00404-201ENST00000418660 PCNTO95613 3336 aa20.51■□□□□ 0.87
LINC00404-201ENST00000418660 FRAT2O75474 233 aaPredicted RBP20.51■□□□□ 0.87
LINC00404-201ENST00000418660 IL15P40933 162 aaPredicted RBP20.51■□□□□ 0.87
LINC00404-201ENST00000418660 CTCFP49711 727 aaPredicted RBP20.51■□□□□ 0.87
LINC00404-201ENST00000418660 MTX1Q13505 466 aa20.51■□□□□ 0.87
LINC00404-201ENST00000418660 IQSEC3Q9UPP2 1182 aaPredicted RBP20.51■□□□□ 0.87
LINC00404-201ENST00000418660 PA2G4Q9UQ80 394 aaKnown RBP20.51■□□□□ 0.87
LINC00404-201ENST00000418660 SPDYE2BA6NHP3 402 aa20.5■□□□□ 0.87
LINC00404-201ENST00000418660 MYO1BO43795 1136 aa20.5■□□□□ 0.87
LINC00404-201ENST00000418660 GNAI2P04899 355 aa20.5■□□□□ 0.87
LINC00404-201ENST00000418660 SPDYE6P0CI01 402 aa20.5■□□□□ 0.87
LINC00404-201ENST00000418660 NOGQ13253 232 aa20.5■□□□□ 0.87
LINC00404-201ENST00000418660 PRAMEF18Q5VWM3 479 aa20.5■□□□□ 0.87
LINC00404-201ENST00000418660 TMEM57Q8N5G2 664 aa20.5■□□□□ 0.87
LINC00404-201ENST00000418660 TBC1D22AQ8WUA7 517 aa20.5■□□□□ 0.87
LINC00404-201ENST00000418660 CCDC102AQ96A19 550 aa20.5■□□□□ 0.87
LINC00404-201ENST00000418660 PRMT6Q96LA8 375 aaPredicted RBP20.5■□□□□ 0.87
LINC00404-201ENST00000418660 TTF2Q9UNY4 1162 aaKnown RBP20.5■□□□□ 0.87
LINC00404-201ENST00000418660 PCDHAC2Q9Y5I4 1007 aa20.5■□□□□ 0.87
LINC00404-201ENST00000418660 SRGAP3O43295 1099 aa20.49■□□□□ 0.87
LINC00404-201ENST00000418660 RBM5P52756 815 aaKnown RBP eCLIP20.49■□□□□ 0.87
LINC00404-201ENST00000418660 CHAF1AQ13111 956 aaPredicted RBP20.49■□□□□ 0.87
LINC00404-201ENST00000418660 IFFO2Q5TF58 517 aa20.49■□□□□ 0.87
LINC00404-201ENST00000418660 BEGAINQ9BUH8 593 aa20.49■□□□□ 0.87
LINC00404-201ENST00000418660 SERPINA10Q9UK55 444 aa20.49■□□□□ 0.87
LINC00404-201ENST00000418660 FAM155AB1AL88 458 aaPredicted RBP20.48■□□□□ 0.87
LINC00404-201ENST00000418660 NF2P35240 595 aa20.48■□□□□ 0.87
LINC00404-201ENST00000418660 ZNF157P51786 506 aaPredicted RBP20.48■□□□□ 0.87
LINC00404-201ENST00000418660 ATP2B3Q16720 1220 aa20.48■□□□□ 0.87
LINC00404-201ENST00000418660 PAPPA2Q9BXP8 1791 aa20.47■□□□□ 0.87
LINC00404-201ENST00000418660 DZIP1LQ8IYY4 767 aaKnown RBP20.47■□□□□ 0.87
LINC00404-201ENST00000418660 DEFB129Q9H1M3 183 aa20.47■□□□□ 0.87
LINC00404-201ENST00000418660 PRDM10Q9NQV6 1147 aa20.47■□□□□ 0.87
LINC00404-201ENST00000418660 COL1A1P02452 1464 aaPredicted RBP20.47■□□□□ 0.87
LINC00404-201ENST00000418660 CLRN2A0PK11 232 aa20.46■□□□□ 0.87
LINC00404-201ENST00000418660 GRIK5Q16478 980 aa20.46■□□□□ 0.87
LINC00404-201ENST00000418660 FTSJ3Q8IY81 847 aaKnown RBP20.46■□□□□ 0.87
LINC00404-201ENST00000418660 PPP2R3BQ9Y5P8 575 aa20.46■□□□□ 0.87
LINC00404-201ENST00000418660 ARAP2Q8WZ64 1704 aa20.46■□□□□ 0.87
LINC00404-201ENST00000418660 SLC10A3P09131 477 aa20.45■□□□□ 0.86
LINC00404-201ENST00000418660 HSPA8P11142 646 aaKnown RBP20.45■□□□□ 0.86
LINC00404-201ENST00000418660 CRKP46108 304 aa20.45■□□□□ 0.86
LINC00404-201ENST00000418660 LBX1P52954 281 aa20.45■□□□□ 0.86
LINC00404-201ENST00000418660 HDLBPQ00341 1268 aaKnown RBP20.45■□□□□ 0.86
LINC00404-201ENST00000418660 MOB2Q70IA6 237 aa20.45■□□□□ 0.86
LINC00404-201ENST00000418660 ZIC5Q96T25 663 aa20.45■□□□□ 0.86
LINC00404-201ENST00000418660 SUGT1Q9Y2Z0 365 aa20.45■□□□□ 0.86
LINC00404-201ENST00000418660 UBE2Q2LH0YL09 131 aa20.44■□□□□ 0.86
LINC00404-201ENST00000418660 TTLL12Q14166 644 aaPredicted RBP20.44■□□□□ 0.86
LINC00404-201ENST00000418660 WDR66Q8TBY9 1149 aa20.44■□□□□ 0.86
LINC00404-201ENST00000418660 MRIQ9BWK5 157 aa20.44■□□□□ 0.86
LINC00404-201ENST00000418660 VEZTQ9HBM0 779 aa20.44■□□□□ 0.86
LINC00404-201ENST00000418660 GNL3LQ9NVN8 582 aaKnown RBP20.44■□□□□ 0.86
LINC00404-201ENST00000418660 AOX1Q06278 1338 aa20.44■□□□□ 0.86
LINC00404-201ENST00000418660 ECM29Q5VYK3 1845 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms