RNA–Protein interactions for RNA: ENST00000417157.2

SLC13A3-205, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-205ENST00000417157 TBC1D22AQ8WUA7 517 aa17.62■□□□□ 0.41
SLC13A3-205ENST00000417157 ABT1Q9ULW3 272 aaKnown RBP17.62■□□□□ 0.41
SLC13A3-205ENST00000417157 ZNF646O15015 1829 aaPredicted RBP17.61■□□□□ 0.41
SLC13A3-205ENST00000417157 TRAF5O00463 557 aa17.61■□□□□ 0.41
SLC13A3-205ENST00000417157 RLBP1P12271 317 aa17.61■□□□□ 0.41
SLC13A3-205ENST00000417157 MFSD14BQ5SR56 506 aa17.61■□□□□ 0.41
SLC13A3-205ENST00000417157 GNL3LQ9NVN8 582 aaKnown RBP17.61■□□□□ 0.41
SLC13A3-205ENST00000417157 PA2G4Q9UQ80 394 aaKnown RBP17.61■□□□□ 0.41
SLC13A3-205ENST00000417157 AKAP2Q9Y2D5 859 aa17.61■□□□□ 0.41
SLC13A3-205ENST00000417157 ZBTB7BO15156 539 aaPredicted RBP17.6■□□□□ 0.41
SLC13A3-205ENST00000417157 CELF2O95319 508 aaKnown RBP17.6■□□□□ 0.41
SLC13A3-205ENST00000417157 ANGEL2Q5VTE6 544 aaKnown RBP17.6■□□□□ 0.41
SLC13A3-205ENST00000417157 USP48Q86UV5 1035 aa17.6■□□□□ 0.41
SLC13A3-205ENST00000417157 DDX19BQ9UMR2 479 aa17.6■□□□□ 0.41
SLC13A3-205ENST00000417157 CNTNAP1P78357 1384 aa17.6■□□□□ 0.41
SLC13A3-205ENST00000417157 WNT10BO00744 389 aa17.59■□□□□ 0.41
SLC13A3-205ENST00000417157 MYO1BO43795 1136 aa17.59■□□□□ 0.41
SLC13A3-205ENST00000417157 G3BP1Q13283 466 aaKnown RBP eCLIP17.59■□□□□ 0.41
SLC13A3-205ENST00000417157 CERS5Q8N5B7 392 aa17.59■□□□□ 0.41
SLC13A3-205ENST00000417157 JMYQ8N9B5 988 aa17.59■□□□□ 0.41
SLC13A3-205ENST00000417157 PANK1Q8TE04 598 aa17.59■□□□□ 0.41
SLC13A3-205ENST00000417157 PNMA6EA0A0J9YXQ4 647 aa17.58■□□□□ 0.4
SLC13A3-205ENST00000417157 RASSF10A6NK89 507 aa17.58■□□□□ 0.4
SLC13A3-205ENST00000417157 BCAMP50895 628 aa17.58■□□□□ 0.4
SLC13A3-205ENST00000417157 MVPQ14764 893 aaKnown RBP17.58■□□□□ 0.4
SLC13A3-205ENST00000417157 DLGAP5Q15398 846 aa17.58■□□□□ 0.4
SLC13A3-205ENST00000417157 MTMR14Q8NCE2 650 aa17.58■□□□□ 0.4
SLC13A3-205ENST00000417157 ZNF408Q9H9D4 720 aa17.58■□□□□ 0.4
SLC13A3-205ENST00000417157 MKRN1Q9UHC7 482 aaKnown RBP17.58■□□□□ 0.4
SLC13A3-205ENST00000417157 JAG2Q9Y219 1238 aa17.58■□□□□ 0.4
SLC13A3-205ENST00000417157 ADM5C9JUS6 153 aa17.57■□□□□ 0.4
SLC13A3-205ENST00000417157 F8W031 263 aaPredicted RBP17.57■□□□□ 0.4
SLC13A3-205ENST00000417157 SEMA3EO15041 775 aa17.57■□□□□ 0.4
SLC13A3-205ENST00000417157 ATP8B2P98198 1209 aa17.57■□□□□ 0.4
SLC13A3-205ENST00000417157 CHAF1AQ13111 956 aaPredicted RBP17.57■□□□□ 0.4
SLC13A3-205ENST00000417157 DEFB115Q30KQ5 88 aa17.57■□□□□ 0.4
SLC13A3-205ENST00000417157 NBPF9Q3BBW0 867 aa17.57■□□□□ 0.4
SLC13A3-205ENST00000417157 APOBEC3FQ8IUX4 373 aaKnown RBP17.57■□□□□ 0.4
SLC13A3-205ENST00000417157 SUGT1Q9Y2Z0 365 aa17.57■□□□□ 0.4
SLC13A3-205ENST00000417157 TLL2Q9Y6L7 1015 aa17.57■□□□□ 0.4
SLC13A3-205ENST00000417157 ARAP2Q8WZ64 1704 aa17.57■□□□□ 0.4
SLC13A3-205ENST00000417157 MAST3O60307 1309 aa17.56■□□□□ 0.4
SLC13A3-205ENST00000417157 ECE1P42892 770 aa17.56■□□□□ 0.4
SLC13A3-205ENST00000417157 FMR1Q06787 632 aaKnown RBP eCLIP17.56■□□□□ 0.4
SLC13A3-205ENST00000417157 OS9Q13438 667 aaPredicted RBP17.56■□□□□ 0.4
SLC13A3-205ENST00000417157 POLA2Q14181 598 aa17.56■□□□□ 0.4
SLC13A3-205ENST00000417157 CST9Q5W186 159 aa17.56■□□□□ 0.4
SLC13A3-205ENST00000417157 WDR66Q8TBY9 1149 aa17.56■□□□□ 0.4
SLC13A3-205ENST00000417157 SSH3Q8TE77 659 aa17.56■□□□□ 0.4
SLC13A3-205ENST00000417157 C1orf115Q9H7X2 142 aa17.56■□□□□ 0.4
SLC13A3-205ENST00000417157 SERPINA10Q9UK55 444 aa17.56■□□□□ 0.4
SLC13A3-205ENST00000417157 TTF2Q9UNY4 1162 aaKnown RBP17.56■□□□□ 0.4
SLC13A3-205ENST00000417157 IQSEC3Q9UPP2 1182 aaPredicted RBP17.56■□□□□ 0.4
SLC13A3-205ENST00000417157 TRPM7Q96QT4 1865 aa17.56■□□□□ 0.4
SLC13A3-205ENST00000417157 COL1A1P02452 1464 aaPredicted RBP17.56■□□□□ 0.4
SLC13A3-205ENST00000417157 ASTN2O75129 1339 aaPredicted RBP17.55■□□□□ 0.4
SLC13A3-205ENST00000417157 ZBTB22O15209 634 aa17.55■□□□□ 0.4
SLC13A3-205ENST00000417157 RBM5P52756 815 aaKnown RBP eCLIP17.55■□□□□ 0.4
SLC13A3-205ENST00000417157 TFCP2Q12800 502 aa17.55■□□□□ 0.4
SLC13A3-205ENST00000417157 PDE3AQ14432 1141 aa17.55■□□□□ 0.4
SLC13A3-205ENST00000417157 CFAP100Q494V2 611 aa17.55■□□□□ 0.4
SLC13A3-205ENST00000417157 C2orf69Q8N8R5 385 aa17.55■□□□□ 0.4
SLC13A3-205ENST00000417157 ZBED3Q96IU2 234 aaPredicted RBP17.55■□□□□ 0.4
SLC13A3-205ENST00000417157 HHIPL1Q96JK4 782 aa17.55■□□□□ 0.4
SLC13A3-205ENST00000417157 A0A1B0GUL7 405 aa17.54■□□□□ 0.4
SLC13A3-205ENST00000417157 SPDYE2BA6NHP3 402 aa17.54■□□□□ 0.4
SLC13A3-205ENST00000417157 SPDYE6P0CI01 402 aa17.54■□□□□ 0.4
SLC13A3-205ENST00000417157 NF2P35240 595 aa17.54■□□□□ 0.4
SLC13A3-205ENST00000417157 PAXIP1Q6ZW49 1069 aaPredicted RBP17.54■□□□□ 0.4
SLC13A3-205ENST00000417157 SAPCD2Q86UD0 394 aa17.54■□□□□ 0.4
SLC13A3-205ENST00000417157 CDCA5Q96FF9 252 aa17.54■□□□□ 0.4
SLC13A3-205ENST00000417157 YTHDC1Q96MU7 727 aaKnown RBP17.54■□□□□ 0.4
SLC13A3-205ENST00000417157 GBA2Q9HCG7 927 aaPredicted RBP17.54■□□□□ 0.4
SLC13A3-205ENST00000417157 DENND2AQ9ULE3 1009 aa17.54■□□□□ 0.4
SLC13A3-205ENST00000417157 SURF6O75683 361 aaKnown RBP17.53■□□□□ 0.4
SLC13A3-205ENST00000417157 FKBP1BP68106 108 aa17.53■□□□□ 0.4
SLC13A3-205ENST00000417157 HDLBPQ00341 1268 aaKnown RBP17.53■□□□□ 0.4
SLC13A3-205ENST00000417157 CEP85Q6P2H3 762 aa17.53■□□□□ 0.4
SLC13A3-205ENST00000417157 COG6Q9Y2V7 657 aa17.53■□□□□ 0.4
SLC13A3-205ENST00000417157 PPP2R3BQ9Y5P8 575 aa17.53■□□□□ 0.4
SLC13A3-205ENST00000417157 VEGFBP49765 207 aa17.52■□□□□ 0.4
SLC13A3-205ENST00000417157 TNFAIP1Q13829 316 aa17.52■□□□□ 0.4
SLC13A3-205ENST00000417157 GORABQ5T7V8 394 aa17.52■□□□□ 0.4
SLC13A3-205ENST00000417157 CCDC102BQ68D86 513 aa17.52■□□□□ 0.4
SLC13A3-205ENST00000417157 ZGPATQ8N5A5 531 aaKnown RBP17.52■□□□□ 0.4
SLC13A3-205ENST00000417157 GPR108Q9NPR9 543 aa17.52■□□□□ 0.4
SLC13A3-205ENST00000417157 CEP350Q5VT06 3117 aa17.52■□□□□ 0.39
SLC13A3-205ENST00000417157 PDS5AQ29RF7 1337 aaKnown RBP17.51■□□□□ 0.39
SLC13A3-205ENST00000417157 HMMRO75330 724 aa17.51■□□□□ 0.39
SLC13A3-205ENST00000417157 CRKP46108 304 aa17.51■□□□□ 0.39
SLC13A3-205ENST00000417157 HSP90AB4PQ58FF6 505 aa17.51■□□□□ 0.39
SLC13A3-205ENST00000417157 RPAP2Q8IXW5 612 aaPredicted RBP17.51■□□□□ 0.39
SLC13A3-205ENST00000417157 TEKT1Q969V4 418 aa17.51■□□□□ 0.39
SLC13A3-205ENST00000417157 XAGE2Q96GT9 111 aa17.51■□□□□ 0.39
SLC13A3-205ENST00000417157 NEUROD6Q96NK8 337 aa17.51■□□□□ 0.39
SLC13A3-205ENST00000417157 NOP58Q9Y2X3 529 aaKnown RBP17.51■□□□□ 0.39
SLC13A3-205ENST00000417157 WDR33Q9C0J8 1336 aaKnown RBP17.5■□□□□ 0.39
SLC13A3-205ENST00000417157 SALL1Q9NSC2 1324 aa17.5■□□□□ 0.39
SLC13A3-205ENST00000417157 ADORA1P30542 326 aa17.5■□□□□ 0.39
SLC13A3-205ENST00000417157 PHKA1P46020 1223 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms