RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 CCZ1P86791 482 aaPredicted RBP14.94□□□□□ -0.02
LRRTM1-205ENST00000417012 NKX1-1Q15270 411 aaPredicted RBP14.94□□□□□ -0.02
LRRTM1-205ENST00000417012 KBTBD3Q8NAB2 608 aa14.94□□□□□ -0.02
LRRTM1-205ENST00000417012 ZNF397Q8NF99 534 aaPredicted RBP14.94□□□□□ -0.02
LRRTM1-205ENST00000417012 CCDC85AQ96PX6 553 aaPredicted RBP14.94□□□□□ -0.02
LRRTM1-205ENST00000417012 UBR2Q8IWV8 1755 aa14.94□□□□□ -0.02
LRRTM1-205ENST00000417012 PLEKHG2Q9H7P9 1386 aa14.94□□□□□ -0.02
LRRTM1-205ENST00000417012 CTDNEP1O95476 244 aa14.94□□□□□ -0.02
LRRTM1-205ENST00000417012 CCT2P78371 535 aaKnown RBP14.94□□□□□ -0.02
LRRTM1-205ENST00000417012 GABPB1Q06547 395 aaPredicted RBP14.94□□□□□ -0.02
LRRTM1-205ENST00000417012 ZRSR1Q15695 479 aaKnown RBP14.94□□□□□ -0.02
LRRTM1-205ENST00000417012 LRRC24Q50LG9 513 aa14.94□□□□□ -0.02
LRRTM1-205ENST00000417012 ENGASEQ8NFI3 743 aa14.94□□□□□ -0.02
LRRTM1-205ENST00000417012 KIF18AQ8NI77 898 aa14.94□□□□□ -0.02
LRRTM1-205ENST00000417012 TRMT1Q9NXH9 659 aaKnown RBP14.94□□□□□ -0.02
LRRTM1-205ENST00000417012 ZNF215Q9UL58 517 aaPredicted RBP14.94□□□□□ -0.02
LRRTM1-205ENST00000417012 ASAP1Q9ULH1 1129 aa14.94□□□□□ -0.02
LRRTM1-205ENST00000417012 KDM4FA0A1W2PPD8 638 aa14.93□□□□□ -0.02
LRRTM1-205ENST00000417012 KIF2AO00139 706 aaPredicted RBP14.93□□□□□ -0.02
LRRTM1-205ENST00000417012 ATG9AQ7Z3C6 839 aa14.93□□□□□ -0.02
LRRTM1-205ENST00000417012 CCAR2Q8N163 923 aaKnown RBP14.93□□□□□ -0.02
LRRTM1-205ENST00000417012 CHMP4CQ96CF2 233 aa14.93□□□□□ -0.02
LRRTM1-205ENST00000417012 ZNF771Q7L3S4 317 aaPredicted RBP14.93□□□□□ -0.02
LRRTM1-205ENST00000417012 MRPS27Q92552 414 aaKnown RBP14.93□□□□□ -0.02
LRRTM1-205ENST00000417012 ERO1AQ96HE7 468 aa14.93□□□□□ -0.02
LRRTM1-205ENST00000417012 ABCA3Q99758 1704 aa14.93□□□□□ -0.02
LRRTM1-205ENST00000417012 NUP188Q5SRE5 1749 aa14.93□□□□□ -0.02
LRRTM1-205ENST00000417012 A0A087WWV3 80 aa14.92□□□□□ -0.02
LRRTM1-205ENST00000417012 IGSF3O75054 1194 aa14.92□□□□□ -0.02
LRRTM1-205ENST00000417012 SDF4Q9BRK5 362 aa14.92□□□□□ -0.02
LRRTM1-205ENST00000417012 TMOD3Q9NYL9 352 aa14.92□□□□□ -0.02
LRRTM1-205ENST00000417012 GUCY1B3Q02153 619 aa14.92□□□□□ -0.02
LRRTM1-205ENST00000417012 PAXIP1Q6ZW49 1069 aaPredicted RBP14.92□□□□□ -0.02
LRRTM1-205ENST00000417012 FBXW7Q969H0 707 aa14.92□□□□□ -0.02
LRRTM1-205ENST00000417012 DSCC1Q9BVC3 393 aa14.92□□□□□ -0.02
LRRTM1-205ENST00000417012 PUS3Q9BZE2 481 aaKnown RBP14.92□□□□□ -0.02
LRRTM1-205ENST00000417012 BTG4Q9NY30 223 aa14.92□□□□□ -0.02
LRRTM1-205ENST00000417012 MORC2Q9Y6X9 1032 aaPredicted RBP14.92□□□□□ -0.02
LRRTM1-205ENST00000417012 LAMA4Q16363 1823 aa14.92□□□□□ -0.02
LRRTM1-205ENST00000417012 NCOA5Q9HCD5 579 aaKnown RBP14.92□□□□□ -0.02
LRRTM1-205ENST00000417012 HELLSQ9NRZ9 838 aa14.92□□□□□ -0.02
LRRTM1-205ENST00000417012 PALLDQ8WX93 1383 aa14.91□□□□□ -0.02
LRRTM1-205ENST00000417012 SALL1Q9NSC2 1324 aa14.91□□□□□ -0.02
LRRTM1-205ENST00000417012 AGXT2Q9BYV1 514 aa14.91□□□□□ -0.02
LRRTM1-205ENST00000417012 KCND1Q9NSA2 647 aa14.91□□□□□ -0.02
LRRTM1-205ENST00000417012 IMPACTQ9P2X3 320 aa14.91□□□□□ -0.02
LRRTM1-205ENST00000417012 TJP1Q07157 1748 aa14.91□□□□□ -0.02
LRRTM1-205ENST00000417012 TOGARAM1Q9Y4F4 1720 aa14.91□□□□□ -0.02
LRRTM1-205ENST00000417012 EXOSC10Q01780 885 aaKnown RBP14.91□□□□□ -0.02
LRRTM1-205ENST00000417012 KRT222Q8N1A0 295 aa14.91□□□□□ -0.02
LRRTM1-205ENST00000417012 PIGBQ92521 554 aa14.91□□□□□ -0.02
LRRTM1-205ENST00000417012 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.91□□□□□ -0.02
LRRTM1-205ENST00000417012 V9GYY5 206 aaPredicted RBP14.91□□□□□ -0.02
LRRTM1-205ENST00000417012 GOLIM4O00461 696 aa14.9□□□□□ -0.02
LRRTM1-205ENST00000417012 SLU7O95391 586 aaKnown RBP14.9□□□□□ -0.02
LRRTM1-205ENST00000417012 DNAJC10Q8IXB1 793 aa14.9□□□□□ -0.02
LRRTM1-205ENST00000417012 FMR1NBQ8N0W7 255 aaPredicted RBP14.9□□□□□ -0.02
LRRTM1-205ENST00000417012 ERCC4Q92889 916 aaPredicted RBP14.9□□□□□ -0.02
LRRTM1-205ENST00000417012 OSBPL5Q9H0X9 879 aaPredicted RBP14.9□□□□□ -0.02
LRRTM1-205ENST00000417012 CARMIL3Q8ND23 1372 aa14.9□□□□□ -0.02
LRRTM1-205ENST00000417012 SF3A1Q15459 793 aaKnown RBP14.9□□□□□ -0.02
LRRTM1-205ENST00000417012 KMT5BQ4FZB7 885 aa14.9□□□□□ -0.02
LRRTM1-205ENST00000417012 CCDC191Q8NCU4 936 aa14.9□□□□□ -0.02
LRRTM1-205ENST00000417012 ZNF274Q96GC6 653 aaPredicted RBP14.9□□□□□ -0.02
LRRTM1-205ENST00000417012 PAG1Q9NWQ8 432 aa14.9□□□□□ -0.02
LRRTM1-205ENST00000417012 PCDHA7Q9UN72 937 aa14.9□□□□□ -0.02
LRRTM1-205ENST00000417012 E7EWF7 191 aa14.9□□□□□ -0.02
LRRTM1-205ENST00000417012 NRDCO43847 1150 aa14.9□□□□□ -0.02
LRRTM1-205ENST00000417012 PPFIA3O75145 1194 aa14.9□□□□□ -0.02
LRRTM1-205ENST00000417012 ELF2Q15723 593 aa14.9□□□□□ -0.02
LRRTM1-205ENST00000417012 ADALQ6DHV7 355 aa14.9□□□□□ -0.02
LRRTM1-205ENST00000417012 CCDC150Q8NCX0 1101 aa14.9□□□□□ -0.02
LRRTM1-205ENST00000417012 FAM89AQ96GI7 184 aa14.9□□□□□ -0.02
LRRTM1-205ENST00000417012 PAPPAQ13219 1627 aa14.89□□□□□ -0.03
LRRTM1-205ENST00000417012 A0A1W2PQ27 194 aa14.89□□□□□ -0.03
LRRTM1-205ENST00000417012 A0A1W2PQ64 194 aa14.89□□□□□ -0.03
LRRTM1-205ENST00000417012 A0A1W2PQD8 194 aa14.89□□□□□ -0.03
LRRTM1-205ENST00000417012 SMC2O95347 1197 aa14.89□□□□□ -0.03
LRRTM1-205ENST00000417012 PDIA3P30101 505 aaKnown RBP14.89□□□□□ -0.03
LRRTM1-205ENST00000417012 TPM4P67936 248 aa14.89□□□□□ -0.03
LRRTM1-205ENST00000417012 ILDR1Q86SU0 546 aaPredicted RBP14.89□□□□□ -0.03
LRRTM1-205ENST00000417012 SYNE4Q8N205 404 aa14.89□□□□□ -0.03
LRRTM1-205ENST00000417012 RTEL1Q9NZ71 1219 aa14.89□□□□□ -0.03
LRRTM1-205ENST00000417012 STK38Q15208 465 aa14.89□□□□□ -0.03
LRRTM1-205ENST00000417012 A0A1B0GVL5 298 aa14.88□□□□□ -0.03
LRRTM1-205ENST00000417012 NBPF11Q86T75 865 aa14.88□□□□□ -0.03
LRRTM1-205ENST00000417012 DHX8Q14562 1220 aaKnown RBP14.88□□□□□ -0.03
LRRTM1-205ENST00000417012 ZMYM1Q5SVZ6 1142 aa14.88□□□□□ -0.03
LRRTM1-205ENST00000417012 KCNG4Q8TDN1 519 aa14.88□□□□□ -0.03
LRRTM1-205ENST00000417012 KIAA1468Q9P260 1216 aa14.88□□□□□ -0.03
LRRTM1-205ENST00000417012 TNS2Q63HR2 1409 aa14.88□□□□□ -0.03
LRRTM1-205ENST00000417012 HSPD1P10809 573 aaKnown RBP14.87□□□□□ -0.03
LRRTM1-205ENST00000417012 SFPQP23246 707 aaKnown RBP eCLIP14.87□□□□□ -0.03
LRRTM1-205ENST00000417012 NDUFA8P51970 172 aa14.87□□□□□ -0.03
LRRTM1-205ENST00000417012 DPCR1Q3MIW9 517 aa14.87□□□□□ -0.03
LRRTM1-205ENST00000417012 FBXO38Q6PIJ6 1188 aa14.87□□□□□ -0.03
LRRTM1-205ENST00000417012 BPIFA3Q9BQP9 254 aa14.87□□□□□ -0.03
LRRTM1-205ENST00000417012 ATG3Q9NT62 314 aa14.87□□□□□ -0.03
LRRTM1-205ENST00000417012 A0A1B0GUL7 405 aa14.87□□□□□ -0.03
LRRTM1-205ENST00000417012 EYA2O00167 538 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms