RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 ZFYVE16Q7Z3T8 1539 aa7.39□□□□□ -1.23
ATG4AP1-201ENST00000416893 TRAPPC8Q9Y2L5 1435 aa7.39□□□□□ -1.23
ATG4AP1-201ENST00000416893 TMEM88BA6NKF7 163 aa7.39□□□□□ -1.23
ATG4AP1-201ENST00000416893 NAA30Q147X3 362 aaPredicted RBP7.39□□□□□ -1.23
ATG4AP1-201ENST00000416893 PLD4Q96BZ4 506 aa7.39□□□□□ -1.23
ATG4AP1-201ENST00000416893 CFDP1Q9UEE9 299 aaPredicted RBP7.39□□□□□ -1.23
ATG4AP1-201ENST00000416893 YEATS2Q9ULM3 1422 aa7.38□□□□□ -1.23
ATG4AP1-201ENST00000416893 LOC102724428A0A0B4J2F2 783 aa7.38□□□□□ -1.23
ATG4AP1-201ENST00000416893 J3QW42 95 aa7.38□□□□□ -1.23
ATG4AP1-201ENST00000416893 DLL1O00548 723 aa7.38□□□□□ -1.23
ATG4AP1-201ENST00000416893 PSAPP07602 524 aa7.38□□□□□ -1.23
ATG4AP1-201ENST00000416893 SIK1P57059 783 aa7.38□□□□□ -1.23
ATG4AP1-201ENST00000416893 CAPN12Q6ZSI9 719 aa7.38□□□□□ -1.23
ATG4AP1-201ENST00000416893 ETFBKMTQ8IXQ9 262 aa7.38□□□□□ -1.23
ATG4AP1-201ENST00000416893 AFAP1Q8N556 730 aa7.38□□□□□ -1.23
ATG4AP1-201ENST00000416893 ABTB2Q8N961 1025 aa7.38□□□□□ -1.23
ATG4AP1-201ENST00000416893 MEGF10Q96KG7 1140 aa7.38□□□□□ -1.23
ATG4AP1-201ENST00000416893 KRTAP9-2Q9BYQ4 174 aa7.38□□□□□ -1.23
ATG4AP1-201ENST00000416893 STIM2Q9P246 746 aa7.38□□□□□ -1.23
ATG4AP1-201ENST00000416893 USTQ9Y2C2 406 aa7.38□□□□□ -1.23
ATG4AP1-201ENST00000416893 KCNMB2Q9Y691 235 aa7.38□□□□□ -1.23
ATG4AP1-201ENST00000416893 HECW2Q9P2P5 1572 aa7.37□□□□□ -1.23
ATG4AP1-201ENST00000416893 MAGI2Q86UL8 1455 aa7.37□□□□□ -1.23
ATG4AP1-201ENST00000416893 PLEKHH2Q8IVE3 1493 aa7.37□□□□□ -1.23
ATG4AP1-201ENST00000416893 KIAA1107Q9UPP5 1409 aa7.37□□□□□ -1.23
ATG4AP1-201ENST00000416893 ZNF644Q9H582 1327 aaPredicted RBP7.37□□□□□ -1.23
ATG4AP1-201ENST00000416893 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.37□□□□□ -1.23
ATG4AP1-201ENST00000416893 TNFRSF10BO14763 440 aa7.37□□□□□ -1.23
ATG4AP1-201ENST00000416893 HYAL3O43820 417 aaPredicted RBP7.37□□□□□ -1.23
ATG4AP1-201ENST00000416893 MMP20O60882 483 aa7.37□□□□□ -1.23
ATG4AP1-201ENST00000416893 GHRHP01286 108 aa7.37□□□□□ -1.23
ATG4AP1-201ENST00000416893 PIK3R5Q8WYR1 880 aa7.37□□□□□ -1.23
ATG4AP1-201ENST00000416893 SLAIN2Q9P270 581 aa7.37□□□□□ -1.23
ATG4AP1-201ENST00000416893 HOXD8P13378 290 aaPredicted RBP7.36□□□□□ -1.23
ATG4AP1-201ENST00000416893 SOX18P35713 384 aa7.36□□□□□ -1.23
ATG4AP1-201ENST00000416893 GDF6Q6KF10 455 aaPredicted RBP7.36□□□□□ -1.23
ATG4AP1-201ENST00000416893 RETREG2Q8NC44 543 aa7.36□□□□□ -1.23
ATG4AP1-201ENST00000416893 NSUN5Q96P11 429 aaKnown RBP7.36□□□□□ -1.23
ATG4AP1-201ENST00000416893 MTMR7Q9Y216 660 aa7.36□□□□□ -1.23
ATG4AP1-201ENST00000416893 FNDC3AQ9Y2H6 1198 aaKnown RBP7.36□□□□□ -1.23
ATG4AP1-201ENST00000416893 CAMSAP2Q08AD1 1489 aa7.36□□□□□ -1.23
ATG4AP1-201ENST00000416893 MLH3Q9UHC1 1453 aa7.36□□□□□ -1.23
ATG4AP1-201ENST00000416893 KIDINS220Q9ULH0 1771 aa7.36□□□□□ -1.23
ATG4AP1-201ENST00000416893 MYOM3Q5VTT5 1437 aa7.35□□□□□ -1.23
ATG4AP1-201ENST00000416893 SIGLEC1Q9BZZ2 1709 aa7.35□□□□□ -1.23
ATG4AP1-201ENST00000416893 ABCA6Q8N139 1617 aa7.35□□□□□ -1.23
ATG4AP1-201ENST00000416893 DIP2CQ9Y2E4 1556 aa7.35□□□□□ -1.23
ATG4AP1-201ENST00000416893 SSFA2P28290 1259 aa7.35□□□□□ -1.23
ATG4AP1-201ENST00000416893 HNRNPMP52272 730 aaKnown RBP eCLIP7.35□□□□□ -1.23
ATG4AP1-201ENST00000416893 PRR23CQ6ZRP0 262 aa7.35□□□□□ -1.23
ATG4AP1-201ENST00000416893 IL22RA1Q8N6P7 574 aa7.35□□□□□ -1.23
ATG4AP1-201ENST00000416893 MRPL18Q9H0U6 180 aaKnown RBP7.35□□□□□ -1.23
ATG4AP1-201ENST00000416893 RBSNQ9H1K0 784 aa7.35□□□□□ -1.23
ATG4AP1-201ENST00000416893 AKTIPQ9H8T0 292 aa7.35□□□□□ -1.23
ATG4AP1-201ENST00000416893 SRA1Q9HD15 236 aaKnown RBP7.35□□□□□ -1.23
ATG4AP1-201ENST00000416893 MBD5Q9P267 1494 aa7.35□□□□□ -1.23
ATG4AP1-201ENST00000416893 KRTAP9-6A0A140TA67 174 aa7.34□□□□□ -1.23
ATG4AP1-201ENST00000416893 ZAP70P43403 619 aa7.34□□□□□ -1.23
ATG4AP1-201ENST00000416893 B4GALNT3Q6L9W6 998 aa7.34□□□□□ -1.23
ATG4AP1-201ENST00000416893 DZIP1LQ8IYY4 767 aaKnown RBP7.34□□□□□ -1.23
ATG4AP1-201ENST00000416893 HELQQ8TDG4 1101 aa7.34□□□□□ -1.23
ATG4AP1-201ENST00000416893 SEPT3Q9UH03 358 aa7.34□□□□□ -1.23
ATG4AP1-201ENST00000416893 RNF112Q9ULX5 631 aa7.34□□□□□ -1.23
ATG4AP1-201ENST00000416893 BCORL1Q5H9F3 1711 aa7.34□□□□□ -1.23
ATG4AP1-201ENST00000416893 ATP10AO60312 1499 aa7.34□□□□□ -1.23
ATG4AP1-201ENST00000416893 C9orf84Q5VXU9 1444 aa7.34□□□□□ -1.23
ATG4AP1-201ENST00000416893 INO80Q9ULG1 1556 aaPredicted RBP7.33□□□□□ -1.24
ATG4AP1-201ENST00000416893 SPAG9O60271 1321 aaKnown RBP7.33□□□□□ -1.24
ATG4AP1-201ENST00000416893 ARID4BQ4LE39 1312 aaPredicted RBP7.33□□□□□ -1.24
ATG4AP1-201ENST00000416893 ATP7AQ04656 1500 aa7.33□□□□□ -1.24
ATG4AP1-201ENST00000416893 CCDC141Q6ZP82 1450 aa7.33□□□□□ -1.24
ATG4AP1-201ENST00000416893 TRIP4Q15650 581 aaPredicted RBP7.33□□□□□ -1.24
ATG4AP1-201ENST00000416893 NLRP13Q86W25 1043 aa7.33□□□□□ -1.24
ATG4AP1-201ENST00000416893 MAP4K3Q8IVH8 894 aa7.33□□□□□ -1.24
ATG4AP1-201ENST00000416893 TMEM130Q8N3G9 435 aa7.33□□□□□ -1.24
ATG4AP1-201ENST00000416893 DCAF11Q8TEB1 546 aa7.33□□□□□ -1.24
ATG4AP1-201ENST00000416893 MIA2Q96PC5 1412 aa7.33□□□□□ -1.24
ATG4AP1-201ENST00000416893 ADAMTSL3P82987 1691 aa7.32□□□□□ -1.24
ATG4AP1-201ENST00000416893 PTPN23Q9H3S7 1636 aa7.32□□□□□ -1.24
ATG4AP1-201ENST00000416893 UBAP1LF5GYI3 381 aa7.32□□□□□ -1.24
ATG4AP1-201ENST00000416893 F8W735 103 aaPredicted RBP7.32□□□□□ -1.24
ATG4AP1-201ENST00000416893 ALX3O95076 343 aa7.32□□□□□ -1.24
ATG4AP1-201ENST00000416893 PDE4CQ08493 712 aa7.32□□□□□ -1.24
ATG4AP1-201ENST00000416893 SETDB1Q15047 1291 aa7.32□□□□□ -1.24
ATG4AP1-201ENST00000416893 TRIM33Q9UPN9 1127 aa7.32□□□□□ -1.24
ATG4AP1-201ENST00000416893 FGD6Q6ZV73 1430 aa7.32□□□□□ -1.24
ATG4AP1-201ENST00000416893 ARHGEF5Q12774 1597 aa7.32□□□□□ -1.24
ATG4AP1-201ENST00000416893 REREQ9P2R6 1566 aa7.32□□□□□ -1.24
ATG4AP1-201ENST00000416893 CARNS1A5YM72 827 aa7.31□□□□□ -1.24
ATG4AP1-201ENST00000416893 RPLP1P05386 114 aaKnown RBP7.31□□□□□ -1.24
ATG4AP1-201ENST00000416893 PCSK2P16519 638 aa7.31□□□□□ -1.24
ATG4AP1-201ENST00000416893 FAM26DQ5JW98 314 aa7.31□□□□□ -1.24
ATG4AP1-201ENST00000416893 CACTIN-AS1Q8N1I8 211 aa7.31□□□□□ -1.24
ATG4AP1-201ENST00000416893 GPR152Q8TDT2 470 aa7.31□□□□□ -1.24
ATG4AP1-201ENST00000416893 MADDQ8WXG6 1647 aa7.3□□□□□ -1.24
ATG4AP1-201ENST00000416893 ZBTB39O15060 712 aa7.3□□□□□ -1.24
ATG4AP1-201ENST00000416893 OR13H1Q8NG92 308 aa7.3□□□□□ -1.24
ATG4AP1-201ENST00000416893 GTF3C2Q8WUA4 911 aaPredicted RBP7.3□□□□□ -1.24
ATG4AP1-201ENST00000416893 MUC3BQ9H195 1237 aa7.3□□□□□ -1.24
ATG4AP1-201ENST00000416893 AGLP35573 1532 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms