RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 SMC4Q9NTJ3 1288 aa19.07■□□□□ 0.64
UBXN4-203ENST00000416538 TSKSQ9UJT2 592 aa19.07■□□□□ 0.64
UBXN4-203ENST00000416538 JAG2Q9Y219 1238 aa19.07■□□□□ 0.64
UBXN4-203ENST00000416538 PCDHAC2Q9Y5I4 1007 aa19.07■□□□□ 0.64
UBXN4-203ENST00000416538 AOX1Q06278 1338 aa19.06■□□□□ 0.64
UBXN4-203ENST00000416538 IL1R1P14778 569 aa19.06■□□□□ 0.64
UBXN4-203ENST00000416538 PRAMEF18Q5VWM3 479 aa19.06■□□□□ 0.64
UBXN4-203ENST00000416538 KLHDC4Q8TBB5 520 aa19.06■□□□□ 0.64
UBXN4-203ENST00000416538 RIPOR2Q9Y4F9 1068 aa19.06■□□□□ 0.64
UBXN4-203ENST00000416538 OTOFQ9HC10 1997 aa19.06■□□□□ 0.64
UBXN4-203ENST00000416538 MAP2K2P36507 400 aa19.05■□□□□ 0.64
UBXN4-203ENST00000416538 LRRC24Q50LG9 513 aa19.05■□□□□ 0.64
UBXN4-203ENST00000416538 LAMB1P07942 1786 aa19.05■□□□□ 0.64
UBXN4-203ENST00000416538 SSC5DA1L4H1 1573 aa19.05■□□□□ 0.64
UBXN4-203ENST00000416538 RGMBQ6NW40 437 aa19.04■□□□□ 0.64
UBXN4-203ENST00000416538 MOB2Q70IA6 237 aa19.04■□□□□ 0.64
UBXN4-203ENST00000416538 ZNF804AQ7Z570 1209 aa19.04■□□□□ 0.64
UBXN4-203ENST00000416538 VGLL2Q8N8G2 317 aa19.04■□□□□ 0.64
UBXN4-203ENST00000416538 GYG1P46976 350 aa19.03■□□□□ 0.64
UBXN4-203ENST00000416538 BRPF1P55201 1214 aaPredicted RBP19.03■□□□□ 0.64
UBXN4-203ENST00000416538 RFX5P48382 616 aaPredicted RBP19.02■□□□□ 0.64
UBXN4-203ENST00000416538 OGFOD1Q8N543 542 aa19.02■□□□□ 0.64
UBXN4-203ENST00000416538 C2orf69Q8N8R5 385 aa19.02■□□□□ 0.64
UBXN4-203ENST00000416538 F8W031 263 aaPredicted RBP19.01■□□□□ 0.63
UBXN4-203ENST00000416538 SLC10A3P09131 477 aa19.01■□□□□ 0.63
UBXN4-203ENST00000416538 NOGQ13253 232 aa19.01■□□□□ 0.63
UBXN4-203ENST00000416538 UBE4AQ14139 1066 aa19.01■□□□□ 0.63
UBXN4-203ENST00000416538 RASAL3Q86YV0 1011 aa19.01■□□□□ 0.63
UBXN4-203ENST00000416538 FAM84BQ96KN1 310 aaPredicted RBP19.01■□□□□ 0.63
UBXN4-203ENST00000416538 NOB1Q9ULX3 412 aaKnown RBP19.01■□□□□ 0.63
UBXN4-203ENST00000416538 FAM205AQ6ZU69 1335 aa19■□□□□ 0.63
UBXN4-203ENST00000416538 DSG3P32926 999 aa19■□□□□ 0.63
UBXN4-203ENST00000416538 TDRD7Q8NHU6 1098 aaKnown RBP19■□□□□ 0.63
UBXN4-203ENST00000416538 COL1A1P02452 1464 aaPredicted RBP19■□□□□ 0.63
UBXN4-203ENST00000416538 MROH5Q6ZUA9 1318 aa19■□□□□ 0.63
UBXN4-203ENST00000416538 CT47B1P0C2W7 299 aaPredicted RBP18.99■□□□□ 0.63
UBXN4-203ENST00000416538 RARSP54136 660 aaKnown RBP18.99■□□□□ 0.63
UBXN4-203ENST00000416538 GRIK5Q16478 980 aa18.99■□□□□ 0.63
UBXN4-203ENST00000416538 ZNF157P51786 506 aaPredicted RBP18.98■□□□□ 0.63
UBXN4-203ENST00000416538 FKBP1AP62942 108 aaKnown RBP18.98■□□□□ 0.63
UBXN4-203ENST00000416538 MIER1Q8N108 512 aa18.98■□□□□ 0.63
UBXN4-203ENST00000416538 MTMR14Q8NCE2 650 aa18.98■□□□□ 0.63
UBXN4-203ENST00000416538 HDAC9Q9UKV0 1011 aa18.98■□□□□ 0.63
UBXN4-203ENST00000416538 IQSEC3Q9UPP2 1182 aaPredicted RBP18.98■□□□□ 0.63
UBXN4-203ENST00000416538 TNNQ9UQP3 1299 aa18.98■□□□□ 0.63
UBXN4-203ENST00000416538 UBE2Q2LH0YL09 131 aa18.97■□□□□ 0.63
UBXN4-203ENST00000416538 HIBADHP31937 336 aaKnown RBP18.97■□□□□ 0.63
UBXN4-203ENST00000416538 KIF23Q02241 960 aaPredicted RBP18.97■□□□□ 0.63
UBXN4-203ENST00000416538 PTPN12Q05209 780 aaKnown RBP18.97■□□□□ 0.63
UBXN4-203ENST00000416538 CFAP100Q494V2 611 aa18.97■□□□□ 0.63
UBXN4-203ENST00000416538 METTL24Q5JXM2 366 aa18.97■□□□□ 0.63
UBXN4-203ENST00000416538 FZD1Q9UP38 647 aa18.97■□□□□ 0.63
UBXN4-203ENST00000416538 CLRN2A0PK11 232 aa18.96■□□□□ 0.63
UBXN4-203ENST00000416538 SPDYE2BA6NHP3 402 aa18.96■□□□□ 0.63
UBXN4-203ENST00000416538 SPDYE6P0CI01 402 aa18.96■□□□□ 0.63
UBXN4-203ENST00000416538 FGFR2P21802 821 aa18.96■□□□□ 0.63
UBXN4-203ENST00000416538 MMP14P50281 582 aa18.96■□□□□ 0.63
UBXN4-203ENST00000416538 FKBP1BP68106 108 aa18.96■□□□□ 0.63
UBXN4-203ENST00000416538 DLGAP5Q15398 846 aa18.96■□□□□ 0.63
UBXN4-203ENST00000416538 MFSD14BQ5SR56 506 aa18.96■□□□□ 0.63
UBXN4-203ENST00000416538 FBXO33Q7Z6M2 555 aa18.96■□□□□ 0.63
UBXN4-203ENST00000416538 APOBEC3FQ8IUX4 373 aaKnown RBP18.96■□□□□ 0.63
UBXN4-203ENST00000416538 PRMT6Q96LA8 375 aaPredicted RBP18.96■□□□□ 0.63
UBXN4-203ENST00000416538 MEIS3Q99687 375 aa18.96■□□□□ 0.63
UBXN4-203ENST00000416538 BEGAINQ9BUH8 593 aa18.96■□□□□ 0.63
UBXN4-203ENST00000416538 PDE8BO95263 885 aa18.95■□□□□ 0.62
UBXN4-203ENST00000416538 ATG9AQ7Z3C6 839 aa18.95■□□□□ 0.62
UBXN4-203ENST00000416538 CCDC102AQ96A19 550 aa18.95■□□□□ 0.62
UBXN4-203ENST00000416538 EYA2O00167 538 aa18.94■□□□□ 0.62
UBXN4-203ENST00000416538 UBTFL1P0CB47 393 aaPredicted RBP18.94■□□□□ 0.62
UBXN4-203ENST00000416538 API5Q9BZZ5 524 aaKnown RBP18.94■□□□□ 0.62
UBXN4-203ENST00000416538 LRRFIP2Q9Y608 721 aaKnown RBP18.94■□□□□ 0.62
UBXN4-203ENST00000416538 CA12O43570 354 aa18.93■□□□□ 0.62
UBXN4-203ENST00000416538 PRKG1Q13976 671 aa18.93■□□□□ 0.62
UBXN4-203ENST00000416538 CSRNP1Q96S65 589 aa18.93■□□□□ 0.62
UBXN4-203ENST00000416538 DEFB129Q9H1M3 183 aa18.93■□□□□ 0.62
UBXN4-203ENST00000416538 KIF16BQ96L93 1317 aa18.93■□□□□ 0.62
UBXN4-203ENST00000416538 BCAMP50895 628 aa18.92■□□□□ 0.62
UBXN4-203ENST00000416538 CDAN1Q8IWY9 1227 aa18.92■□□□□ 0.62
UBXN4-203ENST00000416538 TTF2Q9UNY4 1162 aaKnown RBP18.92■□□□□ 0.62
UBXN4-203ENST00000416538 PA2G4Q9UQ80 394 aaKnown RBP18.92■□□□□ 0.62
UBXN4-203ENST00000416538 BCAR3O75815 825 aa18.91■□□□□ 0.62
UBXN4-203ENST00000416538 CHAF1AQ13111 956 aaPredicted RBP18.91■□□□□ 0.62
UBXN4-203ENST00000416538 TTLL12Q14166 644 aaPredicted RBP18.91■□□□□ 0.62
UBXN4-203ENST00000416538 PUM3Q15397 648 aaKnown RBP18.91■□□□□ 0.62
UBXN4-203ENST00000416538 SIL1Q9H173 461 aa18.91■□□□□ 0.62
UBXN4-203ENST00000416538 TRIM27P14373 513 aa18.9■□□□□ 0.62
UBXN4-203ENST00000416538 SPDYE2Q495Y8 402 aa18.9■□□□□ 0.62
UBXN4-203ENST00000416538 DIEXFQ68CQ4 756 aaKnown RBP18.9■□□□□ 0.62
UBXN4-203ENST00000416538 INTS3Q68E01 1043 aaKnown RBP18.9■□□□□ 0.62
UBXN4-203ENST00000416538 ABHD8Q96I13 439 aa18.9■□□□□ 0.62
UBXN4-203ENST00000416538 VEZTQ9HBM0 779 aa18.9■□□□□ 0.62
UBXN4-203ENST00000416538 RNF186Q9NXI6 227 aa18.9■□□□□ 0.62
UBXN4-203ENST00000416538 CRKP46108 304 aa18.89■□□□□ 0.61
UBXN4-203ENST00000416538 LDLRAD1Q5T700 205 aa18.89■□□□□ 0.61
UBXN4-203ENST00000416538 ARHGAP45Q92619 1136 aa18.89■□□□□ 0.61
UBXN4-203ENST00000416538 MYH2Q9UKX2 1941 aa18.89■□□□□ 0.61
UBXN4-203ENST00000416538 TRPA1O75762 1119 aa18.88■□□□□ 0.61
UBXN4-203ENST00000416538 NF2P35240 595 aa18.88■□□□□ 0.61
UBXN4-203ENST00000416538 RBM5P52756 815 aaKnown RBP eCLIP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms