RNA–Protein interactions for RNA: ENST00000415993.5

HDAC10-203, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 2,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-203ENST00000415993 ZNF532Q9HCE3 1301 aa20.55■□□□□ 0.88
HDAC10-203ENST00000415993 E7EWF7 191 aa20.55■□□□□ 0.88
HDAC10-203ENST00000415993 HMGB1P09429 215 aaKnown RBP20.55■□□□□ 0.88
HDAC10-203ENST00000415993 RPS8P62241 208 aaKnown RBP20.55■□□□□ 0.88
HDAC10-203ENST00000415993 CARMIL3Q8ND23 1372 aa20.55■□□□□ 0.88
HDAC10-203ENST00000415993 UBR3Q6ZT12 1888 aa20.55■□□□□ 0.88
HDAC10-203ENST00000415993 GOLGA6L22H0YM25 854 aa20.54■□□□□ 0.88
HDAC10-203ENST00000415993 SMC3Q9UQE7 1217 aa20.54■□□□□ 0.88
HDAC10-203ENST00000415993 EXOSC10Q01780 885 aaKnown RBP20.54■□□□□ 0.88
HDAC10-203ENST00000415993 MCTP1Q6DN14 999 aa20.54■□□□□ 0.88
HDAC10-203ENST00000415993 DHX32Q7L7V1 743 aaKnown RBP20.54■□□□□ 0.88
HDAC10-203ENST00000415993 CHAMP1Q96JM3 812 aa20.54■□□□□ 0.88
HDAC10-203ENST00000415993 CTNNA3Q9UI47 895 aa20.54■□□□□ 0.88
HDAC10-203ENST00000415993 FOXD4L5Q5VV16 416 aaPredicted RBP20.53■□□□□ 0.88
HDAC10-203ENST00000415993 Q6ZUG5 572 aa20.53■□□□□ 0.88
HDAC10-203ENST00000415993 PROM2Q8N271 834 aa20.53■□□□□ 0.88
HDAC10-203ENST00000415993 FOXD4L4Q8WXT5 416 aaPredicted RBP20.53■□□□□ 0.88
HDAC10-203ENST00000415993 DOCK2Q92608 1830 aa20.53■□□□□ 0.88
HDAC10-203ENST00000415993 WDR33Q9C0J8 1336 aaKnown RBP20.52■□□□□ 0.88
HDAC10-203ENST00000415993 SYT1P21579 422 aa20.52■□□□□ 0.88
HDAC10-203ENST00000415993 SKOR2Q2VWA4 1001 aaPredicted RBP20.52■□□□□ 0.88
HDAC10-203ENST00000415993 AGXT2Q9BYV1 514 aa20.52■□□□□ 0.88
HDAC10-203ENST00000415993 GYS1P13807 737 aa20.52■□□□□ 0.88
HDAC10-203ENST00000415993 GJB2P29033 226 aa20.52■□□□□ 0.88
HDAC10-203ENST00000415993 GYG1P46976 350 aa20.52■□□□□ 0.88
HDAC10-203ENST00000415993 MAP3K12Q12852 859 aa20.52■□□□□ 0.88
HDAC10-203ENST00000415993 LMBRD1Q9NUN5 540 aa20.52■□□□□ 0.88
HDAC10-203ENST00000415993 TNRC6CQ9HCJ0 1690 aaKnown RBP20.52■□□□□ 0.88
HDAC10-203ENST00000415993 RBM6P78332 1123 aaKnown RBP20.51■□□□□ 0.87
HDAC10-203ENST00000415993 LAMA4Q16363 1823 aa20.51■□□□□ 0.87
HDAC10-203ENST00000415993 DTNBO60941 627 aa20.51■□□□□ 0.87
HDAC10-203ENST00000415993 IMMTQ16891 758 aaKnown RBP20.51■□□□□ 0.87
HDAC10-203ENST00000415993 MAGEB6Q8N7X4 407 aa20.51■□□□□ 0.87
HDAC10-203ENST00000415993 FAM84BQ96KN1 310 aaPredicted RBP20.5■□□□□ 0.87
HDAC10-203ENST00000415993 STRBPQ96SI9 672 aaKnown RBP20.5■□□□□ 0.87
HDAC10-203ENST00000415993 LRRC2Q9BYS8 371 aa20.5■□□□□ 0.87
HDAC10-203ENST00000415993 GZF1Q9H116 711 aaPredicted RBP20.5■□□□□ 0.87
HDAC10-203ENST00000415993 STX6O43752 255 aa20.5■□□□□ 0.87
HDAC10-203ENST00000415993 ZNF772Q68DY9 489 aaPredicted RBP20.5■□□□□ 0.87
HDAC10-203ENST00000415993 CNBD1Q8NA66 436 aa20.5■□□□□ 0.87
HDAC10-203ENST00000415993 COL1A1P02452 1464 aaPredicted RBP20.49■□□□□ 0.87
HDAC10-203ENST00000415993 HAND2P61296 217 aa20.49■□□□□ 0.87
HDAC10-203ENST00000415993 TXNRD1Q16881 649 aa20.49■□□□□ 0.87
HDAC10-203ENST00000415993 BRF1Q92994 677 aa20.49■□□□□ 0.87
HDAC10-203ENST00000415993 GTF3C6Q969F1 213 aa20.49■□□□□ 0.87
HDAC10-203ENST00000415993 IQSEC3Q9UPP2 1182 aaPredicted RBP20.49■□□□□ 0.87
HDAC10-203ENST00000415993 ZSCAN22P10073 491 aaPredicted RBP20.48■□□□□ 0.87
HDAC10-203ENST00000415993 PRR5LQ6MZQ0 368 aa20.48■□□□□ 0.87
HDAC10-203ENST00000415993 FBXL16Q8N461 479 aa20.48■□□□□ 0.87
HDAC10-203ENST00000415993 NBPF3Q9H094 633 aa20.48■□□□□ 0.87
HDAC10-203ENST00000415993 KLRK1P26718 216 aa20.48■□□□□ 0.87
HDAC10-203ENST00000415993 KLHL40Q2TBA0 621 aa20.48■□□□□ 0.87
HDAC10-203ENST00000415993 CAVIN4Q5BKX8 364 aa20.48■□□□□ 0.87
HDAC10-203ENST00000415993 FBXO33Q7Z6M2 555 aa20.48■□□□□ 0.87
HDAC10-203ENST00000415993 ANKRD2Q9GZV1 360 aa20.48■□□□□ 0.87
HDAC10-203ENST00000415993 GNL3LQ9NVN8 582 aaKnown RBP20.48■□□□□ 0.87
HDAC10-203ENST00000415993 ZNF213O14771 459 aa20.47■□□□□ 0.87
HDAC10-203ENST00000415993 NPHP1O15259 732 aa20.47■□□□□ 0.87
HDAC10-203ENST00000415993 STK3Q13188 491 aa20.47■□□□□ 0.87
HDAC10-203ENST00000415993 AIDAQ96BJ3 306 aa20.47■□□□□ 0.87
HDAC10-203ENST00000415993 PRPF40AO75400 957 aaKnown RBP20.46■□□□□ 0.87
HDAC10-203ENST00000415993 MTMR6Q9Y217 621 aa20.46■□□□□ 0.87
HDAC10-203ENST00000415993 CHST3Q7LGC8 479 aa20.45■□□□□ 0.86
HDAC10-203ENST00000415993 MB21D2Q8IYB1 491 aaPredicted RBP20.45■□□□□ 0.86
HDAC10-203ENST00000415993 LRP2BPQ9P2M1 347 aa20.45■□□□□ 0.86
HDAC10-203ENST00000415993 MBD4O95243 580 aa20.45■□□□□ 0.86
HDAC10-203ENST00000415993 ALX1Q15699 326 aa20.45■□□□□ 0.86
HDAC10-203ENST00000415993 DDX49Q9Y6V7 483 aaKnown RBP20.45■□□□□ 0.86
HDAC10-203ENST00000415993 ZMYM6O95789 1325 aa20.45■□□□□ 0.86
HDAC10-203ENST00000415993 IRS2Q9Y4H2 1338 aa20.45■□□□□ 0.86
HDAC10-203ENST00000415993 PATL2C9JE40 543 aaKnown RBP20.44■□□□□ 0.86
HDAC10-203ENST00000415993 PFKFB2O60825 505 aa20.44■□□□□ 0.86
HDAC10-203ENST00000415993 SCRN1Q12765 414 aa20.44■□□□□ 0.86
HDAC10-203ENST00000415993 GRAPQ13588 217 aa20.44■□□□□ 0.86
HDAC10-203ENST00000415993 CRY2Q49AN0 593 aa20.44■□□□□ 0.86
HDAC10-203ENST00000415993 GRAPLQ8TC17 118 aaPredicted RBP20.44■□□□□ 0.86
HDAC10-203ENST00000415993 EPB41L4AQ9HCS5 686 aaPredicted RBP20.44■□□□□ 0.86
HDAC10-203ENST00000415993 F13A1P00488 732 aa20.44■□□□□ 0.86
HDAC10-203ENST00000415993 SERPINB2P05120 415 aa20.44■□□□□ 0.86
HDAC10-203ENST00000415993 EVCP57679 992 aa20.44■□□□□ 0.86
HDAC10-203ENST00000415993 FGD1P98174 961 aa20.44■□□□□ 0.86
HDAC10-203ENST00000415993 VPS37DQ86XT2 251 aa20.44■□□□□ 0.86
HDAC10-203ENST00000415993 ARMT1Q9H993 441 aa20.44■□□□□ 0.86
HDAC10-203ENST00000415993 DENND2AQ9ULE3 1009 aa20.44■□□□□ 0.86
HDAC10-203ENST00000415993 PNPLA7Q6ZV29 1317 aa20.44■□□□□ 0.86
HDAC10-203ENST00000415993 PLSCR1O15162 318 aa20.43■□□□□ 0.86
HDAC10-203ENST00000415993 APPP05067 770 aa20.43■□□□□ 0.86
HDAC10-203ENST00000415993 APOBRQ0VD83 1088 aa20.43■□□□□ 0.86
HDAC10-203ENST00000415993 ADGRA1Q86SQ6 560 aa20.43■□□□□ 0.86
HDAC10-203ENST00000415993 SLC51AQ86UW1 340 aa20.43■□□□□ 0.86
HDAC10-203ENST00000415993 TBC1D10CQ8IV04 446 aa20.43■□□□□ 0.86
HDAC10-203ENST00000415993 SEMA3EO15041 775 aa20.43■□□□□ 0.86
HDAC10-203ENST00000415993 NCOA7Q8NI08 942 aa20.43■□□□□ 0.86
HDAC10-203ENST00000415993 GSG1L2A8MUP6 293 aa20.42■□□□□ 0.86
HDAC10-203ENST00000415993 PDIA4P13667 645 aaKnown RBP20.42■□□□□ 0.86
HDAC10-203ENST00000415993 ANTXR2P58335 489 aa20.42■□□□□ 0.86
HDAC10-203ENST00000415993 DDR1Q08345 913 aa20.42■□□□□ 0.86
HDAC10-203ENST00000415993 LARP1BQ659C4 914 aaKnown RBP20.42■□□□□ 0.86
HDAC10-203ENST00000415993 IFNL3Q8IZI9 196 aa20.42■□□□□ 0.86
HDAC10-203ENST00000415993 LCORLQ8N3X6 602 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms