RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 WNK4Q96J92 1243 aa16.88■□□□□ 0.29
CTHRC1-202ENST00000415886 LAMB1P07942 1786 aa16.87■□□□□ 0.29
CTHRC1-202ENST00000415886 ECM29Q5VYK3 1845 aa16.87■□□□□ 0.29
CTHRC1-202ENST00000415886 POTEFA5A3E0 1075 aa16.87■□□□□ 0.29
CTHRC1-202ENST00000415886 F8W031 263 aaPredicted RBP16.87■□□□□ 0.29
CTHRC1-202ENST00000415886 ZBTB48P10074 688 aaPredicted RBP16.87■□□□□ 0.29
CTHRC1-202ENST00000415886 CASP7P55210 303 aa16.87■□□□□ 0.29
CTHRC1-202ENST00000415886 GCKRQ14397 625 aa16.87■□□□□ 0.29
CTHRC1-202ENST00000415886 IRS2Q9Y4H2 1338 aa16.87■□□□□ 0.29
CTHRC1-202ENST00000415886 CLRN2A0PK11 232 aa16.86■□□□□ 0.29
CTHRC1-202ENST00000415886 TAF5LO75529 589 aa16.86■□□□□ 0.29
CTHRC1-202ENST00000415886 CSF1RP07333 972 aa16.86■□□□□ 0.29
CTHRC1-202ENST00000415886 INHBEP58166 350 aa16.86■□□□□ 0.29
CTHRC1-202ENST00000415886 MTMR14Q8NCE2 650 aa16.86■□□□□ 0.29
CTHRC1-202ENST00000415886 AOX1Q06278 1338 aa16.86■□□□□ 0.29
CTHRC1-202ENST00000415886 A0A1B0GUL6 1792 aa16.86■□□□□ 0.29
CTHRC1-202ENST00000415886 PPP1R12BO60237 982 aaPredicted RBP16.85■□□□□ 0.29
CTHRC1-202ENST00000415886 SLC4A2P04920 1241 aa16.85■□□□□ 0.29
CTHRC1-202ENST00000415886 TWISTNBQ3B726 338 aaPredicted RBP16.85■□□□□ 0.29
CTHRC1-202ENST00000415886 CFAP100Q494V2 611 aa16.85■□□□□ 0.29
CTHRC1-202ENST00000415886 WDR63Q8IWG1 891 aa16.85■□□□□ 0.29
CTHRC1-202ENST00000415886 HELBQ8NG08 1087 aaPredicted RBP16.85■□□□□ 0.29
CTHRC1-202ENST00000415886 CD99L2Q8TCZ2 262 aa16.85■□□□□ 0.29
CTHRC1-202ENST00000415886 GCC1Q96CN9 775 aa16.85■□□□□ 0.29
CTHRC1-202ENST00000415886 PPP2R3BQ9Y5P8 575 aa16.85■□□□□ 0.29
CTHRC1-202ENST00000415886 GJA5P36382 358 aa16.84■□□□□ 0.29
CTHRC1-202ENST00000415886 FLIIQ13045 1269 aa16.84■□□□□ 0.29
CTHRC1-202ENST00000415886 NBPF12Q5TAG4 269 aaPredicted RBP16.84■□□□□ 0.29
CTHRC1-202ENST00000415886 VEZTQ9HBM0 779 aa16.84■□□□□ 0.29
CTHRC1-202ENST00000415886 JAG2Q9Y219 1238 aa16.84■□□□□ 0.29
CTHRC1-202ENST00000415886 IL16Q14005 1332 aa16.84■□□□□ 0.29
CTHRC1-202ENST00000415886 ANKRD18BA2A2Z9 1011 aa16.83■□□□□ 0.28
CTHRC1-202ENST00000415886 SPDYE2BA6NHP3 402 aa16.83■□□□□ 0.28
CTHRC1-202ENST00000415886 SPDYE6P0CI01 402 aa16.83■□□□□ 0.28
CTHRC1-202ENST00000415886 CRHR2Q13324 411 aa16.83■□□□□ 0.28
CTHRC1-202ENST00000415886 C15orf52Q6ZUT6 534 aaKnown RBP16.83■□□□□ 0.28
CTHRC1-202ENST00000415886 ERO1AQ96HE7 468 aa16.83■□□□□ 0.28
CTHRC1-202ENST00000415886 PRMT6Q96LA8 375 aaPredicted RBP16.83■□□□□ 0.28
CTHRC1-202ENST00000415886 MYH16Q9H6N6 1097 aa16.83■□□□□ 0.28
CTHRC1-202ENST00000415886 PTPN22Q9Y2R2 807 aa16.83■□□□□ 0.28
CTHRC1-202ENST00000415886 RBBP6Q7Z6E9 1792 aaKnown RBP16.82■□□□□ 0.28
CTHRC1-202ENST00000415886 MYO1BO43795 1136 aa16.82■□□□□ 0.28
CTHRC1-202ENST00000415886 CAP1Q01518 475 aa16.82■□□□□ 0.28
CTHRC1-202ENST00000415886 FKBP5Q13451 457 aaPredicted RBP16.82■□□□□ 0.28
CTHRC1-202ENST00000415886 SUPT20HL1Q3ZLR7 823 aa16.82■□□□□ 0.28
CTHRC1-202ENST00000415886 INTS3Q68E01 1043 aaKnown RBP16.82■□□□□ 0.28
CTHRC1-202ENST00000415886 ZNF804AQ7Z570 1209 aa16.82■□□□□ 0.28
CTHRC1-202ENST00000415886 DNAAF4Q8WXU2 420 aa16.82■□□□□ 0.28
CTHRC1-202ENST00000415886 OTOFQ9HC10 1997 aa16.82■□□□□ 0.28
CTHRC1-202ENST00000415886 USP2O75604 605 aaPredicted RBP16.81■□□□□ 0.28
CTHRC1-202ENST00000415886 IL1R1P14778 569 aa16.81■□□□□ 0.28
CTHRC1-202ENST00000415886 IREB2P48200 963 aaKnown RBP16.81■□□□□ 0.28
CTHRC1-202ENST00000415886 HABP4Q5JVS0 413 aaKnown RBP16.81■□□□□ 0.28
CTHRC1-202ENST00000415886 LINS1Q8NG48 757 aa16.81■□□□□ 0.28
CTHRC1-202ENST00000415886 PTPN18Q99952 460 aa16.81■□□□□ 0.28
CTHRC1-202ENST00000415886 CHMP3Q9Y3E7 222 aa16.81■□□□□ 0.28
CTHRC1-202ENST00000415886 UNCXA6NJT0 531 aa16.8■□□□□ 0.28
CTHRC1-202ENST00000415886 RBM5P52756 815 aaKnown RBP eCLIP16.8■□□□□ 0.28
CTHRC1-202ENST00000415886 FKBP1AP62942 108 aaKnown RBP16.8■□□□□ 0.28
CTHRC1-202ENST00000415886 FOXO4P98177 505 aa16.8■□□□□ 0.28
CTHRC1-202ENST00000415886 IFIT5Q13325 482 aaKnown RBP16.8■□□□□ 0.28
CTHRC1-202ENST00000415886 RASA3Q14644 834 aa16.8■□□□□ 0.28
CTHRC1-202ENST00000415886 ANKRD13AQ8IZ07 590 aa16.8■□□□□ 0.28
CTHRC1-202ENST00000415886 EN2P19622 333 aaPredicted RBP16.79■□□□□ 0.28
CTHRC1-202ENST00000415886 OTUD7BQ6GQQ9 843 aa16.79■□□□□ 0.28
CTHRC1-202ENST00000415886 ARMC5Q96C12 935 aa16.79■□□□□ 0.28
CTHRC1-202ENST00000415886 OPTNQ96CV9 577 aa16.79■□□□□ 0.28
CTHRC1-202ENST00000415886 ELP3Q9H9T3 547 aa16.79■□□□□ 0.28
CTHRC1-202ENST00000415886 EFCC1Q9HA90 598 aa16.79■□□□□ 0.28
CTHRC1-202ENST00000415886 HTTP42858 3142 aa16.78■□□□□ 0.28
CTHRC1-202ENST00000415886 TESPA1A2RU30 521 aaPredicted RBP16.78■□□□□ 0.28
CTHRC1-202ENST00000415886 PLIN1O60240 522 aa16.78■□□□□ 0.28
CTHRC1-202ENST00000415886 SP3Q02447 781 aa16.78■□□□□ 0.28
CTHRC1-202ENST00000415886 ZNF594Q96JF6 807 aaPredicted RBP16.78■□□□□ 0.28
CTHRC1-202ENST00000415886 CDAN1Q8IWY9 1227 aa16.77■□□□□ 0.28
CTHRC1-202ENST00000415886 F6X3S4 739 aa16.76■□□□□ 0.27
CTHRC1-202ENST00000415886 SPDYE2Q495Y8 402 aa16.76■□□□□ 0.27
CTHRC1-202ENST00000415886 EPHA10Q5JZY3 1008 aa16.76■□□□□ 0.27
CTHRC1-202ENST00000415886 LMBR1LQ6UX01 489 aa16.76■□□□□ 0.27
CTHRC1-202ENST00000415886 CNKSR2Q8WXI2 1034 aa16.76■□□□□ 0.27
CTHRC1-202ENST00000415886 MS4A4AQ96JQ5 239 aa16.76■□□□□ 0.27
CTHRC1-202ENST00000415886 TDRD3Q9H7E2 651 aaKnown RBP16.76■□□□□ 0.27
CTHRC1-202ENST00000415886 ZNF70Q9UC06 446 aaPredicted RBP16.76■□□□□ 0.27
CTHRC1-202ENST00000415886 FANCIQ9NVI1 1328 aa16.75■□□□□ 0.27
CTHRC1-202ENST00000415886 EXOSC9Q06265 439 aaKnown RBP16.75■□□□□ 0.27
CTHRC1-202ENST00000415886 TNFAIP1Q13829 316 aa16.75■□□□□ 0.27
CTHRC1-202ENST00000415886 MFSD14BQ5SR56 506 aa16.75■□□□□ 0.27
CTHRC1-202ENST00000415886 LDHAL6AQ6ZMR3 332 aa16.75■□□□□ 0.27
CTHRC1-202ENST00000415886 TTF2Q9UNY4 1162 aaKnown RBP16.75■□□□□ 0.27
CTHRC1-202ENST00000415886 ARAP2Q8WZ64 1704 aa16.75■□□□□ 0.27
CTHRC1-202ENST00000415886 FAM205AQ6ZU69 1335 aa16.74■□□□□ 0.27
CTHRC1-202ENST00000415886 TAF7LQ5H9L4 462 aa16.74■□□□□ 0.27
CTHRC1-202ENST00000415886 BEND3Q5T5X7 828 aa16.74■□□□□ 0.27
CTHRC1-202ENST00000415886 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.74■□□□□ 0.27
CTHRC1-202ENST00000415886 BRI3BPQ8WY22 251 aa16.74■□□□□ 0.27
CTHRC1-202ENST00000415886 ZNF333Q96JL9 665 aa16.74■□□□□ 0.27
CTHRC1-202ENST00000415886 TEPSINQ96N21 525 aa16.74■□□□□ 0.27
CTHRC1-202ENST00000415886 CNNM1Q9NRU3 951 aa16.74■□□□□ 0.27
CTHRC1-202ENST00000415886 PTCH2Q9Y6C5 1203 aa16.74■□□□□ 0.27
CTHRC1-202ENST00000415886 MKI67P46013 3256 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms