RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 RARAP10276 462 aa8.87□□□□□ -0.99
EPHA4-204ENST00000415749 FGD1P98174 961 aa8.87□□□□□ -0.99
EPHA4-204ENST00000415749 CTBSQ01459 385 aa8.87□□□□□ -0.99
EPHA4-204ENST00000415749 ZNF772Q68DY9 489 aaPredicted RBP8.87□□□□□ -0.99
EPHA4-204ENST00000415749 SNX29Q8TEQ0 813 aa8.87□□□□□ -0.99
EPHA4-204ENST00000415749 SREK1Q8WXA9 508 aaKnown RBP8.87□□□□□ -0.99
EPHA4-204ENST00000415749 NIF3L1Q9GZT8 377 aa8.87□□□□□ -0.99
EPHA4-204ENST00000415749 MBIPQ9NS73 344 aa8.87□□□□□ -0.99
EPHA4-204ENST00000415749 ABI2Q9NYB9 513 aaPredicted RBP8.87□□□□□ -0.99
EPHA4-204ENST00000415749 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.87□□□□□ -0.99
EPHA4-204ENST00000415749 EID1Q9Y6B2 187 aa8.87□□□□□ -0.99
EPHA4-204ENST00000415749 ADGBQ8N7X0 1667 aa8.87□□□□□ -0.99
EPHA4-204ENST00000415749 A6NHS1 94 aa8.86□□□□□ -0.99
EPHA4-204ENST00000415749 IGHA2P01877 340 aa8.86□□□□□ -0.99
EPHA4-204ENST00000415749 VAMP1P23763 118 aa8.86□□□□□ -0.99
EPHA4-204ENST00000415749 RXRBP28702 533 aa8.86□□□□□ -0.99
EPHA4-204ENST00000415749 MAP2K3P46734 347 aa8.86□□□□□ -0.99
EPHA4-204ENST00000415749 DSC3Q14574 896 aa8.86□□□□□ -0.99
EPHA4-204ENST00000415749 KRT25Q7Z3Z0 450 aa8.86□□□□□ -0.99
EPHA4-204ENST00000415749 BHMTQ93088 406 aa8.86□□□□□ -0.99
EPHA4-204ENST00000415749 SLC30A3Q99726 388 aa8.86□□□□□ -0.99
EPHA4-204ENST00000415749 AVENQ9NQS1 362 aaPredicted RBP8.86□□□□□ -0.99
EPHA4-204ENST00000415749 PHACTR2O75167 634 aa8.85□□□□□ -0.99
EPHA4-204ENST00000415749 TNFRSF21O75509 655 aa8.85□□□□□ -0.99
EPHA4-204ENST00000415749 KCNA6P17658 529 aa8.85□□□□□ -0.99
EPHA4-204ENST00000415749 NFKB1P19838 968 aa8.85□□□□□ -0.99
EPHA4-204ENST00000415749 TAGLNQ01995 201 aaKnown RBP8.85□□□□□ -0.99
EPHA4-204ENST00000415749 FMR1Q06787 632 aaKnown RBP eCLIP8.85□□□□□ -0.99
EPHA4-204ENST00000415749 NFX1Q12986 1120 aaKnown RBP8.85□□□□□ -0.99
EPHA4-204ENST00000415749 EAPPQ56P03 285 aaPredicted RBP8.85□□□□□ -0.99
EPHA4-204ENST00000415749 MEX3CQ5U5Q3 659 aaKnown RBP8.85□□□□□ -0.99
EPHA4-204ENST00000415749 PMEPA1Q969W9 287 aa8.85□□□□□ -0.99
EPHA4-204ENST00000415749 BCL11AQ9H165 835 aa8.85□□□□□ -0.99
EPHA4-204ENST00000415749 DNAJC25Q9H1X3 360 aa8.85□□□□□ -0.99
EPHA4-204ENST00000415749 SYNMO15061 1565 aa8.85□□□□□ -0.99
EPHA4-204ENST00000415749 SETD1AO15047 1707 aaKnown RBP8.85□□□□□ -0.99
EPHA4-204ENST00000415749 TMEM94Q12767 1356 aa8.85□□□□□ -0.99
EPHA4-204ENST00000415749 JCADQ9P266 1359 aa8.85□□□□□ -0.99
EPHA4-204ENST00000415749 KDM5DQ9BY66 1539 aa8.85□□□□□ -0.99
EPHA4-204ENST00000415749 MBD5Q9P267 1494 aa8.84□□□□□ -0.99
EPHA4-204ENST00000415749 MAP3K6O95382 1288 aa8.84□□□□□ -0.99
EPHA4-204ENST00000415749 PSAPP07602 524 aa8.84□□□□□ -0.99
EPHA4-204ENST00000415749 TARSP26639 723 aaKnown RBP8.84□□□□□ -0.99
EPHA4-204ENST00000415749 ATP2B2Q01814 1243 aa8.84□□□□□ -0.99
EPHA4-204ENST00000415749 GAS6Q14393 721 aa8.84□□□□□ -0.99
EPHA4-204ENST00000415749 ZNF468Q5VIY5 522 aaPredicted RBP8.84□□□□□ -0.99
EPHA4-204ENST00000415749 GPR161Q8N6U8 529 aaKnown RBP8.84□□□□□ -0.99
EPHA4-204ENST00000415749 COL25A1Q9BXS0 654 aaPredicted RBP8.84□□□□□ -0.99
EPHA4-204ENST00000415749 TMEM63CQ9P1W3 806 aa8.84□□□□□ -0.99
EPHA4-204ENST00000415749 HCN2Q9UL51 889 aa8.84□□□□□ -0.99
EPHA4-204ENST00000415749 PHF20L1A8MW92 1017 aa8.83□□□□□ -1
EPHA4-204ENST00000415749 CPNE3O75131 537 aaKnown RBP8.83□□□□□ -1
EPHA4-204ENST00000415749 TSPY4P0CV99 314 aa8.83□□□□□ -1
EPHA4-204ENST00000415749 TSPY10P0CW01 314 aa8.83□□□□□ -1
EPHA4-204ENST00000415749 MAPK8P45983 427 aa8.83□□□□□ -1
EPHA4-204ENST00000415749 ZC3H6P61129 1189 aaKnown RBP8.83□□□□□ -1
EPHA4-204ENST00000415749 GRIN2CQ14957 1233 aa8.83□□□□□ -1
EPHA4-204ENST00000415749 PCSK7Q16549 785 aa8.83□□□□□ -1
EPHA4-204ENST00000415749 FBXO33Q7Z6M2 555 aa8.83□□□□□ -1
EPHA4-204ENST00000415749 RAB44Q7Z6P3 723 aaPredicted RBP8.83□□□□□ -1
EPHA4-204ENST00000415749 CSRNP1Q96S65 589 aa8.83□□□□□ -1
EPHA4-204ENST00000415749 PPP1R1BQ9UD71 204 aaPredicted RBP8.83□□□□□ -1
EPHA4-204ENST00000415749 SCAF11Q99590 1463 aaKnown RBP8.83□□□□□ -1
EPHA4-204ENST00000415749 P4HBP07237 508 aaKnown RBP8.82□□□□□ -1
EPHA4-204ENST00000415749 ARAFP10398 606 aa8.82□□□□□ -1
EPHA4-204ENST00000415749 SYT9Q86SS6 491 aa8.82□□□□□ -1
EPHA4-204ENST00000415749 SLC26A8Q96RN1 970 aa8.82□□□□□ -1
EPHA4-204ENST00000415749 TLR7Q9NYK1 1049 aaKnown RBP8.82□□□□□ -1
EPHA4-204ENST00000415749 FOXD3Q9UJU5 478 aaPredicted RBP8.82□□□□□ -1
EPHA4-204ENST00000415749 MTUS2Q5JR59 1369 aa8.82□□□□□ -1
EPHA4-204ENST00000415749 XIRP1Q702N8 1843 aaKnown RBP8.82□□□□□ -1
EPHA4-204ENST00000415749 ERBB4Q15303 1308 aa8.81□□□□□ -1
EPHA4-204ENST00000415749 C2CD2LO14523 706 aa8.81□□□□□ -1
EPHA4-204ENST00000415749 EIF1AYO14602 144 aaKnown RBP8.81□□□□□ -1
EPHA4-204ENST00000415749 MMP20O60882 483 aa8.81□□□□□ -1
EPHA4-204ENST00000415749 SIN3BO75182 1162 aa8.81□□□□□ -1
EPHA4-204ENST00000415749 CES1P23141 567 aa8.81□□□□□ -1
EPHA4-204ENST00000415749 ADH6P28332 368 aa8.81□□□□□ -1
EPHA4-204ENST00000415749 SOX18P35713 384 aa8.81□□□□□ -1
EPHA4-204ENST00000415749 PLAURQ03405 335 aa8.81□□□□□ -1
EPHA4-204ENST00000415749 ENOX2Q16206 610 aaKnown RBP8.81□□□□□ -1
EPHA4-204ENST00000415749 ALG1LQ6GMV1 187 aa8.81□□□□□ -1
EPHA4-204ENST00000415749 DHX32Q7L7V1 743 aaKnown RBP8.81□□□□□ -1
EPHA4-204ENST00000415749 OR13H1Q8NG92 308 aa8.81□□□□□ -1
EPHA4-204ENST00000415749 ZFYVE28Q9HCC9 887 aa8.81□□□□□ -1
EPHA4-204ENST00000415749 ZFATQ9P243 1243 aa8.81□□□□□ -1
EPHA4-204ENST00000415749 SPATA31A6Q5VVP1 1343 aa8.8□□□□□ -1
EPHA4-204ENST00000415749 PNMA6FA0A0J9YX94 578 aa8.8□□□□□ -1
EPHA4-204ENST00000415749 RECKO95980 971 aa8.8□□□□□ -1
EPHA4-204ENST00000415749 SRSF11Q05519 484 aaKnown RBP8.8□□□□□ -1
EPHA4-204ENST00000415749 ORC1Q13415 861 aa8.8□□□□□ -1
EPHA4-204ENST00000415749 ZC3H13Q5T200 1668 aaKnown RBP8.8□□□□□ -1
EPHA4-204ENST00000415749 ROBO1Q9Y6N7 1651 aa8.8□□□□□ -1
EPHA4-204ENST00000415749 CFAP65Q6ZU64 1925 aaKnown RBP8.8□□□□□ -1
EPHA4-204ENST00000415749 NCOA2Q15596 1464 aa8.79□□□□□ -1
EPHA4-204ENST00000415749 FYCO1Q9BQS8 1478 aa8.79□□□□□ -1
EPHA4-204ENST00000415749 ARHGAP23Q9P227 1491 aa8.79□□□□□ -1
EPHA4-204ENST00000415749 MSH6P52701 1360 aa8.79□□□□□ -1
EPHA4-204ENST00000415749 LDHBP07195 334 aaKnown RBP8.79□□□□□ -1
EPHA4-204ENST00000415749 NRLP54845 237 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms