RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 PRC1O43663 620 aa14.53□□□□□ -0.08
UBA3-203ENST00000415609 MCM5P33992 734 aa14.53□□□□□ -0.08
UBA3-203ENST00000415609 ADD2P35612 726 aa14.53□□□□□ -0.08
UBA3-203ENST00000415609 PUM3Q15397 648 aaKnown RBP14.53□□□□□ -0.08
UBA3-203ENST00000415609 CCDC102BQ68D86 513 aa14.53□□□□□ -0.08
UBA3-203ENST00000415609 TNMDQ9H2S6 317 aa14.53□□□□□ -0.08
UBA3-203ENST00000415609 PIH1D3Q9NQM4 214 aaKnown RBP14.53□□□□□ -0.08
UBA3-203ENST00000415609 GPHNQ9NQX3 736 aaPredicted RBP14.53□□□□□ -0.08
UBA3-203ENST00000415609 SLIT2O94813 1529 aa14.53□□□□□ -0.08
UBA3-203ENST00000415609 SPATA31A1Q5TZJ5 1347 aa14.53□□□□□ -0.08
UBA3-203ENST00000415609 MROH5Q6ZUA9 1318 aa14.53□□□□□ -0.08
UBA3-203ENST00000415609 SALL1Q9NSC2 1324 aa14.53□□□□□ -0.08
UBA3-203ENST00000415609 ATP6V1AP38606 617 aa14.53□□□□□ -0.08
UBA3-203ENST00000415609 PHKA1P46020 1223 aa14.53□□□□□ -0.08
UBA3-203ENST00000415609 EIF5P55010 431 aaKnown RBP14.53□□□□□ -0.08
UBA3-203ENST00000415609 HELBQ8NG08 1087 aaPredicted RBP14.53□□□□□ -0.08
UBA3-203ENST00000415609 NCOA7Q8NI08 942 aa14.53□□□□□ -0.08
UBA3-203ENST00000415609 DDX19AQ9NUU7 478 aaKnown RBP14.53□□□□□ -0.08
UBA3-203ENST00000415609 MYH15Q9Y2K3 1946 aa14.52□□□□□ -0.08
UBA3-203ENST00000415609 NRAPQ86VF7 1730 aa14.52□□□□□ -0.09
UBA3-203ENST00000415609 ADCY5O95622 1261 aa14.52□□□□□ -0.09
UBA3-203ENST00000415609 UQCRFS1P1P0C7P4 283 aa14.52□□□□□ -0.09
UBA3-203ENST00000415609 CRKLP46109 303 aaKnown RBP14.52□□□□□ -0.09
UBA3-203ENST00000415609 CEBPZQ03701 1054 aaKnown RBP14.52□□□□□ -0.09
UBA3-203ENST00000415609 SUSD4Q5VX71 490 aa14.52□□□□□ -0.09
UBA3-203ENST00000415609 INTS5Q6P9B9 1019 aaKnown RBP14.52□□□□□ -0.09
UBA3-203ENST00000415609 MB21D2Q8IYB1 491 aaPredicted RBP14.52□□□□□ -0.09
UBA3-203ENST00000415609 FBXL16Q8N461 479 aa14.52□□□□□ -0.09
UBA3-203ENST00000415609 LPIN2Q92539 896 aa14.52□□□□□ -0.09
UBA3-203ENST00000415609 PGBD1Q96JS3 809 aa14.52□□□□□ -0.09
UBA3-203ENST00000415609 AK7Q96M32 723 aa14.52□□□□□ -0.09
UBA3-203ENST00000415609 ATRNO75882 1429 aa14.52□□□□□ -0.09
UBA3-203ENST00000415609 CARMIL3Q8ND23 1372 aa14.51□□□□□ -0.09
UBA3-203ENST00000415609 KLF18A0A0U1RQI7 1052 aa14.51□□□□□ -0.09
UBA3-203ENST00000415609 GOLGA8BA8MQT2 603 aa14.51□□□□□ -0.09
UBA3-203ENST00000415609 ARID4AP29374 1257 aaPredicted RBP14.51□□□□□ -0.09
UBA3-203ENST00000415609 PLCB2Q00722 1185 aa14.51□□□□□ -0.09
UBA3-203ENST00000415609 GUCY1B3Q02153 619 aa14.51□□□□□ -0.09
UBA3-203ENST00000415609 ARAP2Q8WZ64 1704 aa14.51□□□□□ -0.09
UBA3-203ENST00000415609 ZNF500O60304 480 aaPredicted RBP14.51□□□□□ -0.09
UBA3-203ENST00000415609 KDM4AO75164 1064 aa14.51□□□□□ -0.09
UBA3-203ENST00000415609 APPP05067 770 aa14.51□□□□□ -0.09
UBA3-203ENST00000415609 SLC5A1P13866 664 aa14.51□□□□□ -0.09
UBA3-203ENST00000415609 EVCP57679 992 aa14.51□□□□□ -0.09
UBA3-203ENST00000415609 CKAP2LQ8IYA6 745 aa14.51□□□□□ -0.09
UBA3-203ENST00000415609 MPHOSPH8Q99549 860 aa14.51□□□□□ -0.09
UBA3-203ENST00000415609 UTP14AQ9BVJ6 771 aaKnown RBP14.51□□□□□ -0.09
UBA3-203ENST00000415609 CLSTN2Q9H4D0 955 aa14.51□□□□□ -0.09
UBA3-203ENST00000415609 THRAP3Q9Y2W1 955 aaKnown RBP14.51□□□□□ -0.09
UBA3-203ENST00000415609 ZNF532Q9HCE3 1301 aa14.5□□□□□ -0.09
UBA3-203ENST00000415609 LOC102724428A0A0B4J2F2 783 aa14.5□□□□□ -0.09
UBA3-203ENST00000415609 NR1I2O75469 434 aa14.5□□□□□ -0.09
UBA3-203ENST00000415609 PDE6AP16499 860 aa14.5□□□□□ -0.09
UBA3-203ENST00000415609 SIK1P57059 783 aa14.5□□□□□ -0.09
UBA3-203ENST00000415609 ANTXR2P58335 489 aa14.5□□□□□ -0.09
UBA3-203ENST00000415609 TYRO3Q06418 890 aa14.5□□□□□ -0.09
UBA3-203ENST00000415609 UBE3CQ15386 1083 aa14.5□□□□□ -0.09
UBA3-203ENST00000415609 MYO5AQ9Y4I1 1855 aaKnown RBP14.5□□□□□ -0.09
UBA3-203ENST00000415609 FGFR2P21802 821 aa14.49□□□□□ -0.09
UBA3-203ENST00000415609 TRDNQ13061 729 aa14.49□□□□□ -0.09
UBA3-203ENST00000415609 MARCH10Q8NA82 808 aaPredicted RBP14.49□□□□□ -0.09
UBA3-203ENST00000415609 ZNF396Q96N95 335 aaPredicted RBP14.49□□□□□ -0.09
UBA3-203ENST00000415609 WWC3Q9ULE0 1092 aa14.49□□□□□ -0.09
UBA3-203ENST00000415609 PHLPP1O60346 1717 aa14.49□□□□□ -0.09
UBA3-203ENST00000415609 DHX16O60231 1041 aaKnown RBP14.49□□□□□ -0.09
UBA3-203ENST00000415609 ADD1P35611 737 aaKnown RBP14.49□□□□□ -0.09
UBA3-203ENST00000415609 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.49□□□□□ -0.09
UBA3-203ENST00000415609 RAB11FIP4Q86YS3 637 aa14.49□□□□□ -0.09
UBA3-203ENST00000415609 FTOQ9C0B1 505 aaKnown RBP eCLIP14.49□□□□□ -0.09
UBA3-203ENST00000415609 SEC31BQ9NQW1 1179 aa14.49□□□□□ -0.09
UBA3-203ENST00000415609 MRVI1Q9Y6F6 885 aa14.49□□□□□ -0.09
UBA3-203ENST00000415609 DDX60Q8IY21 1712 aaKnown RBP14.49□□□□□ -0.09
UBA3-203ENST00000415609 NUTM2BA6NNL0 878 aaPredicted RBP14.48□□□□□ -0.09
UBA3-203ENST00000415609 NUTM2EB1AL46 878 aaPredicted RBP14.48□□□□□ -0.09
UBA3-203ENST00000415609 OFD1O75665 1012 aa14.48□□□□□ -0.09
UBA3-203ENST00000415609 CAMTA2O94983 1202 aa14.48□□□□□ -0.09
UBA3-203ENST00000415609 FDPSP14324 419 aaKnown RBP14.48□□□□□ -0.09
UBA3-203ENST00000415609 ITPK1Q13572 414 aa14.48□□□□□ -0.09
UBA3-203ENST00000415609 PARP10Q53GL7 1025 aa14.48□□□□□ -0.09
UBA3-203ENST00000415609 NUTM2AQ8IVF1 878 aaPredicted RBP14.48□□□□□ -0.09
UBA3-203ENST00000415609 MPNDQ8N594 471 aa14.48□□□□□ -0.09
UBA3-203ENST00000415609 SPATA5Q8NB90 893 aa14.48□□□□□ -0.09
UBA3-203ENST00000415609 FAM200AQ8TCP9 573 aa14.48□□□□□ -0.09
UBA3-203ENST00000415609 AIDAQ96BJ3 306 aa14.48□□□□□ -0.09
UBA3-203ENST00000415609 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.48□□□□□ -0.09
UBA3-203ENST00000415609 WDR19Q8NEZ3 1342 aa14.48□□□□□ -0.09
UBA3-203ENST00000415609 CPLX1O14810 134 aa14.48□□□□□ -0.09
UBA3-203ENST00000415609 CCDC152Q4G0S7 254 aa14.48□□□□□ -0.09
UBA3-203ENST00000415609 TBC1D10CQ8IV04 446 aa14.48□□□□□ -0.09
UBA3-203ENST00000415609 USP28Q96RU2 1077 aa14.48□□□□□ -0.09
UBA3-203ENST00000415609 NBPF3Q9H094 633 aa14.48□□□□□ -0.09
UBA3-203ENST00000415609 HPS5Q9UPZ3 1129 aa14.48□□□□□ -0.09
UBA3-203ENST00000415609 NIP7Q9Y221 180 aaKnown RBP eCLIP14.48□□□□□ -0.09
UBA3-203ENST00000415609 RREB1Q92766 1687 aa14.47□□□□□ -0.09
UBA3-203ENST00000415609 TCRBV5S4A2TA0A5A2 114 aa14.47□□□□□ -0.09
UBA3-203ENST00000415609 SNAP23O00161 211 aa14.47□□□□□ -0.09
UBA3-203ENST00000415609 RASGRF1Q13972 1273 aa14.47□□□□□ -0.09
UBA3-203ENST00000415609 ATL3Q6DD88 541 aa14.47□□□□□ -0.09
UBA3-203ENST00000415609 RCOR1Q9UKL0 485 aa14.47□□□□□ -0.09
UBA3-203ENST00000415609 IGHMBP2P38935 993 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms