RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 CCDC102AQ96A19 550 aa31.32■■■□□ 2.6
HLA-C-204ENST00000415537 GYG1P46976 350 aa31.31■■■□□ 2.6
HLA-C-204ENST00000415537 DLGAP5Q15398 846 aa31.31■■■□□ 2.6
HLA-C-204ENST00000415537 CERS5Q8N5B7 392 aa31.31■■■□□ 2.6
HLA-C-204ENST00000415537 JAG2Q9Y219 1238 aa31.31■■■□□ 2.6
HLA-C-204ENST00000415537 F8W031 263 aaPredicted RBP31.3■■■□□ 2.6
HLA-C-204ENST00000415537 RARSP54136 660 aaKnown RBP31.3■■■□□ 2.6
HLA-C-204ENST00000415537 FKBP1BP68106 108 aa31.3■■■□□ 2.6
HLA-C-204ENST00000415537 VPS37DQ86XT2 251 aa31.3■■■□□ 2.6
HLA-C-204ENST00000415537 UBTFL1P0CB47 393 aaPredicted RBP31.29■■■□□ 2.6
HLA-C-204ENST00000415537 NF2P35240 595 aa31.29■■■□□ 2.6
HLA-C-204ENST00000415537 APOBEC3FQ8IUX4 373 aaKnown RBP31.29■■■□□ 2.6
HLA-C-204ENST00000415537 KLHDC4Q8TBB5 520 aa31.29■■■□□ 2.6
HLA-C-204ENST00000415537 FAM84BQ96KN1 310 aaPredicted RBP31.29■■■□□ 2.6
HLA-C-204ENST00000415537 PAPPA2Q9BXP8 1791 aa31.28■■■□□ 2.6
HLA-C-204ENST00000415537 CA12O43570 354 aa31.28■■■□□ 2.6
HLA-C-204ENST00000415537 PRAMEF18Q5VWM3 479 aa31.28■■■□□ 2.6
HLA-C-204ENST00000415537 MIER1Q8N108 512 aa31.28■■■□□ 2.6
HLA-C-204ENST00000415537 TDRD7Q8NHU6 1098 aaKnown RBP31.28■■■□□ 2.6
HLA-C-204ENST00000415537 HDAC5Q9UQL6 1122 aa31.28■■■□□ 2.6
HLA-C-204ENST00000415537 PDE8BO95263 885 aa31.27■■■□□ 2.6
HLA-C-204ENST00000415537 CAVIN4Q5BKX8 364 aa31.27■■■□□ 2.6
HLA-C-204ENST00000415537 ZBED3Q96IU2 234 aaPredicted RBP31.27■■■□□ 2.6
HLA-C-204ENST00000415537 KIF16BQ96L93 1317 aa31.26■■■□□ 2.6
HLA-C-204ENST00000415537 ECM29Q5VYK3 1845 aa31.26■■■□□ 2.6
HLA-C-204ENST00000415537 FAM155AB1AL88 458 aaPredicted RBP31.26■■■□□ 2.59
HLA-C-204ENST00000415537 MYO1BO43795 1136 aa31.26■■■□□ 2.59
HLA-C-204ENST00000415537 TTLL12Q14166 644 aaPredicted RBP31.26■■■□□ 2.59
HLA-C-204ENST00000415537 MTMR14Q8NCE2 650 aa31.26■■■□□ 2.59
HLA-C-204ENST00000415537 FAM205AQ6ZU69 1335 aa31.25■■■□□ 2.59
HLA-C-204ENST00000415537 CAPN15O75808 1086 aa31.25■■■□□ 2.59
HLA-C-204ENST00000415537 CFAP100Q494V2 611 aa31.25■■■□□ 2.59
HLA-C-204ENST00000415537 FRAT2O75474 233 aaPredicted RBP31.24■■■□□ 2.59
HLA-C-204ENST00000415537 RBM5P52756 815 aaKnown RBP eCLIP31.24■■■□□ 2.59
HLA-C-204ENST00000415537 MFSD14BQ5SR56 506 aa31.24■■■□□ 2.59
HLA-C-204ENST00000415537 ARHGAP45Q92619 1136 aa31.24■■■□□ 2.59
HLA-C-204ENST00000415537 ZIC5Q96T25 663 aa31.24■■■□□ 2.59
HLA-C-204ENST00000415537 TSKSQ9UJT2 592 aa31.24■■■□□ 2.59
HLA-C-204ENST00000415537 VGLL2Q8N8G2 317 aa31.23■■■□□ 2.59
HLA-C-204ENST00000415537 SLC10A3P09131 477 aa31.22■■■□□ 2.59
HLA-C-204ENST00000415537 FBXO33Q7Z6M2 555 aa31.22■■■□□ 2.59
HLA-C-204ENST00000415537 EYA2O00167 538 aa31.21■■■□□ 2.59
HLA-C-204ENST00000415537 RFX5P48382 616 aaPredicted RBP31.21■■■□□ 2.59
HLA-C-204ENST00000415537 KIF23Q02241 960 aaPredicted RBP31.21■■■□□ 2.59
HLA-C-204ENST00000415537 MOB2Q70IA6 237 aa31.21■■■□□ 2.59
HLA-C-204ENST00000415537 SPDYE2BA6NHP3 402 aa31.2■■■□□ 2.59
HLA-C-204ENST00000415537 UBE2Q2LH0YL09 131 aa31.2■■■□□ 2.59
HLA-C-204ENST00000415537 IPO8O15397 1037 aaKnown RBP31.2■■■□□ 2.59
HLA-C-204ENST00000415537 IFIT1P09914 478 aaKnown RBP31.2■■■□□ 2.59
HLA-C-204ENST00000415537 SPDYE6P0CI01 402 aa31.2■■■□□ 2.59
HLA-C-204ENST00000415537 HNRNPUQ00839 825 aaKnown RBP eCLIP31.2■■■□□ 2.59
HLA-C-204ENST00000415537 PTPN12Q05209 780 aaKnown RBP31.2■■■□□ 2.59
HLA-C-204ENST00000415537 PUM3Q15397 648 aaKnown RBP31.2■■■□□ 2.59
HLA-C-204ENST00000415537 TTF2Q9UNY4 1162 aaKnown RBP31.2■■■□□ 2.59
HLA-C-204ENST00000415537 IQSEC3Q9UPP2 1182 aaPredicted RBP31.2■■■□□ 2.59
HLA-C-204ENST00000415537 PRMT6Q96LA8 375 aaPredicted RBP31.19■■■□□ 2.58
HLA-C-204ENST00000415537 DEFB129Q9H1M3 183 aa31.19■■■□□ 2.58
HLA-C-204ENST00000415537 PCDHAC2Q9Y5I4 1007 aa31.19■■■□□ 2.58
HLA-C-204ENST00000415537 COL1A1P02452 1464 aaPredicted RBP31.19■■■□□ 2.58
HLA-C-204ENST00000415537 ARAP2Q8WZ64 1704 aa31.18■■■□□ 2.58
HLA-C-204ENST00000415537 AKAP11Q9UKA4 1901 aa31.18■■■□□ 2.58
HLA-C-204ENST00000415537 CHAF1AQ13111 956 aaPredicted RBP31.18■■■□□ 2.58
HLA-C-204ENST00000415537 ARMC9Q7Z3E5 817 aa31.18■■■□□ 2.58
HLA-C-204ENST00000415537 RASAL3Q86YV0 1011 aa31.18■■■□□ 2.58
HLA-C-204ENST00000415537 LRRFIP2Q9Y608 721 aaKnown RBP31.18■■■□□ 2.58
HLA-C-204ENST00000415537 CLRN2A0PK11 232 aa31.17■■■□□ 2.58
HLA-C-204ENST00000415537 SIL1Q9H173 461 aa31.17■■■□□ 2.58
HLA-C-204ENST00000415537 VEZTQ9HBM0 779 aa31.17■■■□□ 2.58
HLA-C-204ENST00000415537 FBXO3Q9UK99 471 aa31.17■■■□□ 2.58
HLA-C-204ENST00000415537 SLC5A1P13866 664 aa31.16■■■□□ 2.58
HLA-C-204ENST00000415537 BCAMP50895 628 aa31.16■■■□□ 2.58
HLA-C-204ENST00000415537 PRKG1Q13976 671 aa31.16■■■□□ 2.58
HLA-C-204ENST00000415537 INTS3Q68E01 1043 aaKnown RBP31.16■■■□□ 2.58
HLA-C-204ENST00000415537 REM2Q8IYK8 340 aaPredicted RBP31.16■■■□□ 2.58
HLA-C-204ENST00000415537 TBC1D22AQ8WUA7 517 aa31.16■■■□□ 2.58
HLA-C-204ENST00000415537 FRAT1Q92837 279 aaPredicted RBP31.16■■■□□ 2.58
HLA-C-204ENST00000415537 MEIS3Q99687 375 aa31.16■■■□□ 2.58
HLA-C-204ENST00000415537 SERPINA10Q9UK55 444 aa31.16■■■□□ 2.58
HLA-C-204ENST00000415537 PPP2R3BQ9Y5P8 575 aa31.16■■■□□ 2.58
HLA-C-204ENST00000415537 GNAI3P08754 354 aa31.15■■■□□ 2.58
HLA-C-204ENST00000415537 FGFR2P21802 821 aa31.15■■■□□ 2.58
HLA-C-204ENST00000415537 LPIN2Q92539 896 aa31.14■■■□□ 2.58
HLA-C-204ENST00000415537 BCAR3O75815 825 aa31.13■■■□□ 2.57
HLA-C-204ENST00000415537 CIAO1O76071 339 aa31.13■■■□□ 2.57
HLA-C-204ENST00000415537 ATG9AQ7Z3C6 839 aa31.13■■■□□ 2.57
HLA-C-204ENST00000415537 CSRNP1Q96S65 589 aa31.13■■■□□ 2.57
HLA-C-204ENST00000415537 CEP126Q9P2H0 1117 aa31.13■■■□□ 2.57
HLA-C-204ENST00000415537 MYH13Q9UKX3 1938 aa31.13■■■□□ 2.57
HLA-C-204ENST00000415537 CASP8AP2Q9UKL3 1982 aa31.12■■■□□ 2.57
HLA-C-204ENST00000415537 ATF7IPQ6VMQ6 1270 aa31.12■■■□□ 2.57
HLA-C-204ENST00000415537 SAGE1Q9NXZ1 904 aa31.12■■■□□ 2.57
HLA-C-204ENST00000415537 ANGEL1Q9UNK9 670 aaKnown RBP31.12■■■□□ 2.57
HLA-C-204ENST00000415537 SUPT20HL1Q3ZLR7 823 aa31.11■■■□□ 2.57
HLA-C-204ENST00000415537 PPP1R12BO60237 982 aaPredicted RBP31.1■■■□□ 2.57
HLA-C-204ENST00000415537 TRIM27P14373 513 aa31.1■■■□□ 2.57
HLA-C-204ENST00000415537 CRKP46108 304 aa31.1■■■□□ 2.57
HLA-C-204ENST00000415537 TNFAIP1Q13829 316 aa31.1■■■□□ 2.57
HLA-C-204ENST00000415537 DZIP1LQ8IYY4 767 aaKnown RBP31.1■■■□□ 2.57
HLA-C-204ENST00000415537 TRPA1O75762 1119 aa31.09■■■□□ 2.57
HLA-C-204ENST00000415537 IL15P40933 162 aaPredicted RBP31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms