RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 BOLA2Q9H3K6 86 aa16.2■□□□□ 0.18
CNN3-203ENST00000415017 ZNF277Q9NRM2 450 aaPredicted RBP16.2■□□□□ 0.18
CNN3-203ENST00000415017 DENND2AQ9ULE3 1009 aa16.2■□□□□ 0.18
CNN3-203ENST00000415017 MAST2Q6P0Q8 1798 aa16.19■□□□□ 0.18
CNN3-203ENST00000415017 RIMBP2O15034 1052 aa16.19■□□□□ 0.18
CNN3-203ENST00000415017 CYP2E1P05181 493 aaPredicted RBP16.19■□□□□ 0.18
CNN3-203ENST00000415017 PI16Q6UXB8 463 aa16.19■□□□□ 0.18
CNN3-203ENST00000415017 RFX7Q2KHR2 1363 aa16.18■□□□□ 0.18
CNN3-203ENST00000415017 YDJCA8MPS7 323 aa16.18■□□□□ 0.18
CNN3-203ENST00000415017 PPIP5K2O43314 1243 aa16.18■□□□□ 0.18
CNN3-203ENST00000415017 SDSP20132 328 aa16.18■□□□□ 0.18
CNN3-203ENST00000415017 ZAP70P43403 619 aa16.18■□□□□ 0.18
CNN3-203ENST00000415017 RASSF7Q02833 373 aa16.18■□□□□ 0.18
CNN3-203ENST00000415017 VPS37DQ86XT2 251 aa16.18■□□□□ 0.18
CNN3-203ENST00000415017 TIAM2Q8IVF5 1701 aa16.18■□□□□ 0.18
CNN3-203ENST00000415017 ECE2O60344 883 aa16.17■□□□□ 0.18
CNN3-203ENST00000415017 FKBP1AP62942 108 aaKnown RBP16.17■□□□□ 0.18
CNN3-203ENST00000415017 DOK7Q18PE1 504 aa16.17■□□□□ 0.18
CNN3-203ENST00000415017 EVI5LQ96CN4 794 aa16.17■□□□□ 0.18
CNN3-203ENST00000415017 BCL11AQ9H165 835 aa16.17■□□□□ 0.18
CNN3-203ENST00000415017 ANTXR1Q9H6X2 564 aa16.17■□□□□ 0.18
CNN3-203ENST00000415017 PAG1Q9NWQ8 432 aa16.17■□□□□ 0.18
CNN3-203ENST00000415017 FZD9O00144 591 aa16.16■□□□□ 0.18
CNN3-203ENST00000415017 GRIN3BO60391 1043 aa16.16■□□□□ 0.18
CNN3-203ENST00000415017 LMNB1P20700 586 aa16.16■□□□□ 0.18
CNN3-203ENST00000415017 STRIP1Q5VSL9 837 aa16.16■□□□□ 0.18
CNN3-203ENST00000415017 LARGE2Q8N3Y3 721 aa16.16■□□□□ 0.18
CNN3-203ENST00000415017 KBTBD3Q8NAB2 608 aa16.16■□□□□ 0.18
CNN3-203ENST00000415017 WDR66Q8TBY9 1149 aa16.16■□□□□ 0.18
CNN3-203ENST00000415017 EDC3Q96F86 508 aaKnown RBP16.16■□□□□ 0.18
CNN3-203ENST00000415017 DBNDD1Q9H9R9 158 aa16.16■□□□□ 0.18
CNN3-203ENST00000415017 SNRKQ9NRH2 765 aa16.16■□□□□ 0.18
CNN3-203ENST00000415017 ZNRF3Q9ULT6 936 aa16.16■□□□□ 0.18
CNN3-203ENST00000415017 IQSEC3Q9UPP2 1182 aaPredicted RBP16.16■□□□□ 0.18
CNN3-203ENST00000415017 NDUFB9Q9Y6M9 179 aa16.16■□□□□ 0.18
CNN3-203ENST00000415017 TTF1Q15361 905 aaPredicted RBP16.15■□□□□ 0.18
CNN3-203ENST00000415017 DACT2Q5SW24 774 aa16.15■□□□□ 0.18
CNN3-203ENST00000415017 TMED8Q6PL24 325 aaPredicted RBP16.15■□□□□ 0.18
CNN3-203ENST00000415017 ARHGAP27Q6ZUM4 889 aa16.15■□□□□ 0.18
CNN3-203ENST00000415017 PIH1D3Q9NQM4 214 aaKnown RBP16.15■□□□□ 0.18
CNN3-203ENST00000415017 KCNQ5Q9NR82 932 aa16.15■□□□□ 0.18
CNN3-203ENST00000415017 MYH2Q9UKX2 1941 aa16.14■□□□□ 0.17
CNN3-203ENST00000415017 GOLIM4O00461 696 aa16.14■□□□□ 0.17
CNN3-203ENST00000415017 CNTROBQ8N137 903 aa16.14■□□□□ 0.17
CNN3-203ENST00000415017 TBC1D22AQ8WUA7 517 aa16.14■□□□□ 0.17
CNN3-203ENST00000415017 SUGT1Q9Y2Z0 365 aa16.14■□□□□ 0.17
CNN3-203ENST00000415017 USP17L3A6NCW0 530 aa16.13■□□□□ 0.17
CNN3-203ENST00000415017 USP17L4A6NCW7 530 aa16.13■□□□□ 0.17
CNN3-203ENST00000415017 MAP4K4O95819 1239 aaPredicted RBP16.13■□□□□ 0.17
CNN3-203ENST00000415017 VIL1P09327 827 aaKnown RBP16.13■□□□□ 0.17
CNN3-203ENST00000415017 GTF2IP78347 998 aa16.13■□□□□ 0.17
CNN3-203ENST00000415017 TTLL5Q6EMB2 1281 aa16.13■□□□□ 0.17
CNN3-203ENST00000415017 USP17L1Q7RTZ2 530 aa16.13■□□□□ 0.17
CNN3-203ENST00000415017 CERS5Q8N5B7 392 aa16.13■□□□□ 0.17
CNN3-203ENST00000415017 ZNF384Q8TF68 577 aa16.13■□□□□ 0.17
CNN3-203ENST00000415017 GMLQ99445 158 aa16.13■□□□□ 0.17
CNN3-203ENST00000415017 DNAJC2Q99543 621 aaKnown RBP16.13■□□□□ 0.17
CNN3-203ENST00000415017 TBC1D9Q6ZT07 1266 aa16.12■□□□□ 0.17
CNN3-203ENST00000415017 NIM1KQ8IY84 436 aa16.12■□□□□ 0.17
CNN3-203ENST00000415017 ZGPATQ8N5A5 531 aaKnown RBP16.12■□□□□ 0.17
CNN3-203ENST00000415017 TCRBV5S4A2TA0A5A2 114 aa16.11■□□□□ 0.17
CNN3-203ENST00000415017 CXCL9Q07325 125 aa16.11■□□□□ 0.17
CNN3-203ENST00000415017 GRIK5Q16478 980 aa16.11■□□□□ 0.17
CNN3-203ENST00000415017 GPR162Q16538 588 aa16.11■□□□□ 0.17
CNN3-203ENST00000415017 JDP2Q8WYK2 163 aa16.11■□□□□ 0.17
CNN3-203ENST00000415017 MRIQ9BWK5 157 aa16.11■□□□□ 0.17
CNN3-203ENST00000415017 CDK5RAP2Q96SN8 1893 aa16.1■□□□□ 0.17
CNN3-203ENST00000415017 TRIM6-TRIM34B2RNG4 842 aa16.1■□□□□ 0.17
CNN3-203ENST00000415017 FRAT2O75474 233 aaPredicted RBP16.1■□□□□ 0.17
CNN3-203ENST00000415017 CHMLP26374 656 aa16.1■□□□□ 0.17
CNN3-203ENST00000415017 PRDX5P30044 214 aa16.1■□□□□ 0.17
CNN3-203ENST00000415017 ADD2P35612 726 aa16.1■□□□□ 0.17
CNN3-203ENST00000415017 UBE3CQ15386 1083 aa16.1■□□□□ 0.17
CNN3-203ENST00000415017 MFSD14BQ5SR56 506 aa16.1■□□□□ 0.17
CNN3-203ENST00000415017 SPTY2D1Q68D10 685 aaPredicted RBP16.1■□□□□ 0.17
CNN3-203ENST00000415017 NSUN4Q96CB9 384 aaKnown RBP16.1■□□□□ 0.17
CNN3-203ENST00000415017 FAM163AQ96GL9 167 aaPredicted RBP16.1■□□□□ 0.17
CNN3-203ENST00000415017 ZC3H4Q9UPT8 1303 aaKnown RBP16.1■□□□□ 0.17
CNN3-203ENST00000415017 G3V3G9 751 aa16.09■□□□□ 0.17
CNN3-203ENST00000415017 PSMD14O00487 310 aa16.09■□□□□ 0.17
CNN3-203ENST00000415017 ZFYP08048 801 aaPredicted RBP16.09■□□□□ 0.17
CNN3-203ENST00000415017 CHAF1AQ13111 956 aaPredicted RBP16.09■□□□□ 0.17
CNN3-203ENST00000415017 DCAF8Q5TAQ9 597 aa16.09■□□□□ 0.17
CNN3-203ENST00000415017 RSBN1LQ6PCB5 846 aaPredicted RBP16.09■□□□□ 0.17
CNN3-203ENST00000415017 RILPL2Q969X0 211 aa16.09■□□□□ 0.17
CNN3-203ENST00000415017 FOCADQ5VW36 1801 aa16.09■□□□□ 0.17
CNN3-203ENST00000415017 MYO3BQ8WXR4 1341 aa16.09■□□□□ 0.17
CNN3-203ENST00000415017 ADAMTSL1Q8N6G6 1762 aa16.08■□□□□ 0.17
CNN3-203ENST00000415017 ECM29Q5VYK3 1845 aa16.08■□□□□ 0.17
CNN3-203ENST00000415017 HIP1O00291 1037 aa16.08■□□□□ 0.16
CNN3-203ENST00000415017 RNF113AO15541 343 aaKnown RBP16.08■□□□□ 0.16
CNN3-203ENST00000415017 CDC45O75419 566 aa16.08■□□□□ 0.16
CNN3-203ENST00000415017 PDE6AP16499 860 aa16.08■□□□□ 0.16
CNN3-203ENST00000415017 MMP14P50281 582 aa16.08■□□□□ 0.16
CNN3-203ENST00000415017 HDLBPQ00341 1268 aaKnown RBP16.08■□□□□ 0.16
CNN3-203ENST00000415017 MECOMQ03112 1051 aa16.08■□□□□ 0.16
CNN3-203ENST00000415017 MAP3K12Q12852 859 aa16.08■□□□□ 0.16
CNN3-203ENST00000415017 C8orf34Q49A92 452 aa16.08■□□□□ 0.16
CNN3-203ENST00000415017 ZMYM1Q5SVZ6 1142 aa16.08■□□□□ 0.16
CNN3-203ENST00000415017 CIAPIN1Q6FI81 312 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms