RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 USTQ9Y2C2 406 aa4.66□□□□□ -1.66
SF3B1-203ENST00000414174 TGFBR3LH3BV60 316 aa4.65□□□□□ -1.67
SF3B1-203ENST00000414174 EPB41L2O43491 1005 aaKnown RBP4.65□□□□□ -1.67
SF3B1-203ENST00000414174 DEAF1O75398 565 aaPredicted RBP4.65□□□□□ -1.67
SF3B1-203ENST00000414174 RFX1P22670 979 aa4.65□□□□□ -1.67
SF3B1-203ENST00000414174 PAX3P23760 479 aa4.65□□□□□ -1.67
SF3B1-203ENST00000414174 TBC1D8BQ0IIM8 1120 aa4.65□□□□□ -1.67
SF3B1-203ENST00000414174 HDAC1Q13547 482 aaPredicted RBP4.65□□□□□ -1.67
SF3B1-203ENST00000414174 OCLNQ16625 522 aa4.65□□□□□ -1.67
SF3B1-203ENST00000414174 C4orf46Q504U0 113 aa4.65□□□□□ -1.67
SF3B1-203ENST00000414174 LCE4AQ5TA78 99 aa4.65□□□□□ -1.67
SF3B1-203ENST00000414174 ZNF280DQ6N043 979 aa4.65□□□□□ -1.67
SF3B1-203ENST00000414174 OGFOD2Q6N063 350 aa4.65□□□□□ -1.67
SF3B1-203ENST00000414174 Q6ZS46 218 aa4.65□□□□□ -1.67
SF3B1-203ENST00000414174 WFDC8Q8IUA0 241 aa4.65□□□□□ -1.67
SF3B1-203ENST00000414174 ZDHHC13Q8IUH4 622 aa4.65□□□□□ -1.67
SF3B1-203ENST00000414174 PNISRQ8TF01 805 aaKnown RBP4.65□□□□□ -1.67
SF3B1-203ENST00000414174 SNRNP27Q8WVK2 155 aaKnown RBP4.65□□□□□ -1.67
SF3B1-203ENST00000414174 PMM1Q92871 262 aa4.65□□□□□ -1.67
SF3B1-203ENST00000414174 SENP7Q9BQF6 1050 aa4.65□□□□□ -1.67
SF3B1-203ENST00000414174 GSX2Q9BZM3 304 aa4.65□□□□□ -1.67
SF3B1-203ENST00000414174 SLAIN2Q9P270 581 aa4.65□□□□□ -1.67
SF3B1-203ENST00000414174 STOML1Q9UBI4 398 aa4.65□□□□□ -1.67
SF3B1-203ENST00000414174 NAGPAQ9UK23 515 aa4.65□□□□□ -1.67
SF3B1-203ENST00000414174 PNMA2Q9UL42 364 aa4.65□□□□□ -1.67
SF3B1-203ENST00000414174 LRFN2Q9ULH4 789 aa4.65□□□□□ -1.67
SF3B1-203ENST00000414174 CHMP3Q9Y3E7 222 aa4.65□□□□□ -1.67
SF3B1-203ENST00000414174 RBM19Q9Y4C8 960 aaKnown RBP4.65□□□□□ -1.67
SF3B1-203ENST00000414174 COMMD10Q9Y6G5 202 aa4.65□□□□□ -1.67
SF3B1-203ENST00000414174 IVNS1ABPQ9Y6Y0 642 aa4.65□□□□□ -1.67
SF3B1-203ENST00000414174 F8W735 103 aaPredicted RBP4.64□□□□□ -1.67
SF3B1-203ENST00000414174 U2SURPO15042 1029 aaKnown RBP4.64□□□□□ -1.67
SF3B1-203ENST00000414174 PARNO95453 639 aaKnown RBP4.64□□□□□ -1.67
SF3B1-203ENST00000414174 C8AP07357 584 aa4.64□□□□□ -1.67
SF3B1-203ENST00000414174 INPP5BP32019 993 aa4.64□□□□□ -1.67
SF3B1-203ENST00000414174 RHBDL3P58872 404 aa4.64□□□□□ -1.67
SF3B1-203ENST00000414174 FKBP5Q13451 457 aaPredicted RBP4.64□□□□□ -1.67
SF3B1-203ENST00000414174 FAM26DQ5JW98 314 aa4.64□□□□□ -1.67
SF3B1-203ENST00000414174 EGFL6Q8IUX8 553 aa4.64□□□□□ -1.67
SF3B1-203ENST00000414174 AMOTL1Q8IY63 956 aa4.64□□□□□ -1.67
SF3B1-203ENST00000414174 MSL3Q8N5Y2 521 aaKnown RBP4.64□□□□□ -1.67
SF3B1-203ENST00000414174 GPATCH3Q96I76 525 aa4.64□□□□□ -1.67
SF3B1-203ENST00000414174 CARD10Q9BWT7 1032 aa4.64□□□□□ -1.67
SF3B1-203ENST00000414174 NOVA2Q9UNW9 492 aaKnown RBP4.64□□□□□ -1.67
SF3B1-203ENST00000414174 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.63□□□□□ -1.67
SF3B1-203ENST00000414174 FOXO3O43524 673 aa4.63□□□□□ -1.67
SF3B1-203ENST00000414174 ALX3O95076 343 aa4.63□□□□□ -1.67
SF3B1-203ENST00000414174 KIF4AO95239 1232 aa4.63□□□□□ -1.67
SF3B1-203ENST00000414174 COPB2P35606 906 aa4.63□□□□□ -1.67
SF3B1-203ENST00000414174 CALD1Q05682 793 aaKnown RBP4.63□□□□□ -1.67
SF3B1-203ENST00000414174 DGKZQ13574 1117 aa4.63□□□□□ -1.67
SF3B1-203ENST00000414174 CAPN12Q6ZSI9 719 aa4.63□□□□□ -1.67
SF3B1-203ENST00000414174 NOP9Q86U38 636 aaKnown RBP4.63□□□□□ -1.67
SF3B1-203ENST00000414174 FAM35AQ86V20 835 aa4.63□□□□□ -1.67
SF3B1-203ENST00000414174 MYO19Q96H55 970 aa4.63□□□□□ -1.67
SF3B1-203ENST00000414174 PRIMPOLQ96LW4 560 aa4.63□□□□□ -1.67
SF3B1-203ENST00000414174 LPIN3Q9BQK8 851 aa4.63□□□□□ -1.67
SF3B1-203ENST00000414174 KRTAP17-1Q9BYP8 105 aa4.63□□□□□ -1.67
SF3B1-203ENST00000414174 ZFATQ9P243 1243 aa4.63□□□□□ -1.67
SF3B1-203ENST00000414174 PRDM4Q9UKN5 801 aa4.63□□□□□ -1.67
SF3B1-203ENST00000414174 FAN1Q9Y2M0 1017 aa4.63□□□□□ -1.67
SF3B1-203ENST00000414174 PRR19A6NJB7 356 aa4.62□□□□□ -1.67
SF3B1-203ENST00000414174 OPLAHO14841 1288 aa4.62□□□□□ -1.67
SF3B1-203ENST00000414174 MAP3K6O95382 1288 aa4.62□□□□□ -1.67
SF3B1-203ENST00000414174 APPP05067 770 aa4.62□□□□□ -1.67
SF3B1-203ENST00000414174 BDNFP23560 247 aa4.62□□□□□ -1.67
SF3B1-203ENST00000414174 POLD1P28340 1107 aa4.62□□□□□ -1.67
SF3B1-203ENST00000414174 IDH3AP50213 366 aa4.62□□□□□ -1.67
SF3B1-203ENST00000414174 IRX3P78415 501 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-203ENST00000414174 PLAURQ03405 335 aa4.62□□□□□ -1.67
SF3B1-203ENST00000414174 HSP90AB2PQ58FF8 381 aa4.62□□□□□ -1.67
SF3B1-203ENST00000414174 ZKSCAN2Q63HK3 967 aa4.62□□□□□ -1.67
SF3B1-203ENST00000414174 ARMCX6Q7L4S7 300 aa4.62□□□□□ -1.67
SF3B1-203ENST00000414174 DPH6Q7L8W6 267 aa4.62□□□□□ -1.67
SF3B1-203ENST00000414174 FAM200AQ8TCP9 573 aa4.62□□□□□ -1.67
SF3B1-203ENST00000414174 DCAF11Q8TEB1 546 aa4.62□□□□□ -1.67
SF3B1-203ENST00000414174 SAP130Q9H0E3 1048 aa4.62□□□□□ -1.67
SF3B1-203ENST00000414174 SRA1Q9HD15 236 aaKnown RBP4.62□□□□□ -1.67
SF3B1-203ENST00000414174 GNL3LQ9NVN8 582 aaKnown RBP4.62□□□□□ -1.67
SF3B1-203ENST00000414174 USP20Q9Y2K6 914 aa4.62□□□□□ -1.67
SF3B1-203ENST00000414174 FRMD4BQ9Y2L6 1034 aa4.62□□□□□ -1.67
SF3B1-203ENST00000414174 RPGRIP1LQ68CZ1 1315 aa4.62□□□□□ -1.67
SF3B1-203ENST00000414174 GOLGA6CA6NDK9 693 aa4.61□□□□□ -1.67
SF3B1-203ENST00000414174 GOLGA6BA6NDN3 693 aa4.61□□□□□ -1.67
SF3B1-203ENST00000414174 ZBTB42B2RXF5 422 aa4.61□□□□□ -1.67
SF3B1-203ENST00000414174 TCERG1O14776 1098 aaKnown RBP4.61□□□□□ -1.67
SF3B1-203ENST00000414174 ZNF500O60304 480 aaPredicted RBP4.61□□□□□ -1.67
SF3B1-203ENST00000414174 PRMT3O60678 531 aa4.61□□□□□ -1.67
SF3B1-203ENST00000414174 MICAL2O94851 1124 aa4.61□□□□□ -1.67
SF3B1-203ENST00000414174 GOLGA6DP0CG33 693 aa4.61□□□□□ -1.67
SF3B1-203ENST00000414174 NFKB1P19838 968 aa4.61□□□□□ -1.67
SF3B1-203ENST00000414174 GYS2P54840 703 aa4.61□□□□□ -1.67
SF3B1-203ENST00000414174 NFIAQ12857 509 aa4.61□□□□□ -1.67
SF3B1-203ENST00000414174 CCINQ13939 588 aa4.61□□□□□ -1.67
SF3B1-203ENST00000414174 ELOAQ14241 798 aaKnown RBP4.61□□□□□ -1.67
SF3B1-203ENST00000414174 FBLN7Q53RD9 439 aa4.61□□□□□ -1.67
SF3B1-203ENST00000414174 COX20Q5RI15 118 aa4.61□□□□□ -1.67
SF3B1-203ENST00000414174 PERM1Q5SV97 790 aa4.61□□□□□ -1.67
SF3B1-203ENST00000414174 TMEM164Q5U3C3 297 aa4.61□□□□□ -1.67
SF3B1-203ENST00000414174 DDX46Q7L014 1031 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms