RNA–Protein interactions for RNA: ENST00000414040.6

TNFRSF25-206, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,198 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-206ENST00000414040 CT47B1P0C2W7 299 aaPredicted RBP28.58■■■□□ 2.17
TNFRSF25-206ENST00000414040 UBE4AQ14139 1066 aa28.58■■■□□ 2.17
TNFRSF25-206ENST00000414040 RGMBQ6NW40 437 aa28.58■■■□□ 2.17
TNFRSF25-206ENST00000414040 MOB2Q70IA6 237 aa28.58■■■□□ 2.17
TNFRSF25-206ENST00000414040 CAPN15O75808 1086 aa28.57■■■□□ 2.16
TNFRSF25-206ENST00000414040 RARSP54136 660 aaKnown RBP28.57■■■□□ 2.16
TNFRSF25-206ENST00000414040 VGLL2Q8N8G2 317 aa28.57■■■□□ 2.16
TNFRSF25-206ENST00000414040 MYH13Q9UKX3 1938 aa28.57■■■□□ 2.16
TNFRSF25-206ENST00000414040 AOX1Q06278 1338 aa28.56■■■□□ 2.16
TNFRSF25-206ENST00000414040 MROH5Q6ZUA9 1318 aa28.56■■■□□ 2.16
TNFRSF25-206ENST00000414040 FAM84BQ96KN1 310 aaPredicted RBP28.56■■■□□ 2.16
TNFRSF25-206ENST00000414040 HDAC9Q9UKV0 1011 aa28.56■■■□□ 2.16
TNFRSF25-206ENST00000414040 RFX5P48382 616 aaPredicted RBP28.55■■■□□ 2.16
TNFRSF25-206ENST00000414040 BRPF1P55201 1214 aaPredicted RBP28.55■■■□□ 2.16
TNFRSF25-206ENST00000414040 TDRD7Q8NHU6 1098 aaKnown RBP28.55■■■□□ 2.16
TNFRSF25-206ENST00000414040 METTL24Q5JXM2 366 aa28.54■■■□□ 2.16
TNFRSF25-206ENST00000414040 DIEXFQ68CQ4 756 aaKnown RBP28.54■■■□□ 2.16
TNFRSF25-206ENST00000414040 CASP8AP2Q9UKL3 1982 aa28.53■■■□□ 2.16
TNFRSF25-206ENST00000414040 FAM205AQ6ZU69 1335 aa28.53■■■□□ 2.16
TNFRSF25-206ENST00000414040 HIBADHP31937 336 aaKnown RBP28.53■■■□□ 2.16
TNFRSF25-206ENST00000414040 ZNF157P51786 506 aaPredicted RBP28.53■■■□□ 2.16
TNFRSF25-206ENST00000414040 NOGQ13253 232 aa28.53■■■□□ 2.16
TNFRSF25-206ENST00000414040 IQSEC3Q9UPP2 1182 aaPredicted RBP28.53■■■□□ 2.16
TNFRSF25-206ENST00000414040 AKAP11Q9UKA4 1901 aa28.53■■■□□ 2.16
TNFRSF25-206ENST00000414040 BEGAINQ9BUH8 593 aa28.52■■■□□ 2.16
TNFRSF25-206ENST00000414040 TNNQ9UQP3 1299 aa28.52■■■□□ 2.16
TNFRSF25-206ENST00000414040 FKBP1AP62942 108 aaKnown RBP28.51■■■□□ 2.15
TNFRSF25-206ENST00000414040 DLGAP5Q15398 846 aa28.51■■■□□ 2.15
TNFRSF25-206ENST00000414040 API5Q9BZZ5 524 aaKnown RBP28.51■■■□□ 2.15
TNFRSF25-206ENST00000414040 UBE2Q2LH0YL09 131 aa28.5■■■□□ 2.15
TNFRSF25-206ENST00000414040 PDE8BO95263 885 aa28.5■■■□□ 2.15
TNFRSF25-206ENST00000414040 SLC10A3P09131 477 aa28.5■■■□□ 2.15
TNFRSF25-206ENST00000414040 UBTFL1P0CB47 393 aaPredicted RBP28.5■■■□□ 2.15
TNFRSF25-206ENST00000414040 MMP14P50281 582 aa28.5■■■□□ 2.15
TNFRSF25-206ENST00000414040 CFAP100Q494V2 611 aa28.5■■■□□ 2.15
TNFRSF25-206ENST00000414040 KIF23Q02241 960 aaPredicted RBP28.49■■■□□ 2.15
TNFRSF25-206ENST00000414040 PTPN12Q05209 780 aaKnown RBP28.49■■■□□ 2.15
TNFRSF25-206ENST00000414040 GRIK5Q16478 980 aa28.49■■■□□ 2.15
TNFRSF25-206ENST00000414040 FBXO33Q7Z6M2 555 aa28.49■■■□□ 2.15
TNFRSF25-206ENST00000414040 RASAL3Q86YV0 1011 aa28.49■■■□□ 2.15
TNFRSF25-206ENST00000414040 PRMT6Q96LA8 375 aaPredicted RBP28.49■■■□□ 2.15
TNFRSF25-206ENST00000414040 MEIS3Q99687 375 aa28.49■■■□□ 2.15
TNFRSF25-206ENST00000414040 CLRN2A0PK11 232 aa28.48■■■□□ 2.15
TNFRSF25-206ENST00000414040 MFSD14BQ5SR56 506 aa28.48■■■□□ 2.15
TNFRSF25-206ENST00000414040 APOBEC3FQ8IUX4 373 aaKnown RBP28.48■■■□□ 2.15
TNFRSF25-206ENST00000414040 MTMR14Q8NCE2 650 aa28.48■■■□□ 2.15
TNFRSF25-206ENST00000414040 FZD1Q9UP38 647 aa28.48■■■□□ 2.15
TNFRSF25-206ENST00000414040 LRRFIP2Q9Y608 721 aaKnown RBP28.48■■■□□ 2.15
TNFRSF25-206ENST00000414040 SSC5DA1L4H1 1573 aa28.48■■■□□ 2.15
TNFRSF25-206ENST00000414040 SPDYE2BA6NHP3 402 aa28.47■■■□□ 2.15
TNFRSF25-206ENST00000414040 EYA2O00167 538 aa28.47■■■□□ 2.15
TNFRSF25-206ENST00000414040 BCAR3O75815 825 aa28.47■■■□□ 2.15
TNFRSF25-206ENST00000414040 SPDYE6P0CI01 402 aa28.47■■■□□ 2.15
TNFRSF25-206ENST00000414040 ATG9AQ7Z3C6 839 aa28.47■■■□□ 2.15
TNFRSF25-206ENST00000414040 CCDC102AQ96A19 550 aa28.47■■■□□ 2.15
TNFRSF25-206ENST00000414040 KIF16BQ96L93 1317 aa28.46■■■□□ 2.15
TNFRSF25-206ENST00000414040 FGFR2P21802 821 aa28.46■■■□□ 2.15
TNFRSF25-206ENST00000414040 FKBP1BP68106 108 aa28.46■■■□□ 2.15
TNFRSF25-206ENST00000414040 PRKG1Q13976 671 aa28.46■■■□□ 2.15
TNFRSF25-206ENST00000414040 SIL1Q9H173 461 aa28.46■■■□□ 2.15
TNFRSF25-206ENST00000414040 BCAMP50895 628 aa28.45■■■□□ 2.14
TNFRSF25-206ENST00000414040 HNRNPUQ00839 825 aaKnown RBP eCLIP28.45■■■□□ 2.14
TNFRSF25-206ENST00000414040 CHAF1AQ13111 956 aaPredicted RBP28.45■■■□□ 2.14
TNFRSF25-206ENST00000414040 TTLL12Q14166 644 aaPredicted RBP28.44■■■□□ 2.14
TNFRSF25-206ENST00000414040 DEFB129Q9H1M3 183 aa28.44■■■□□ 2.14
TNFRSF25-206ENST00000414040 TTF2Q9UNY4 1162 aaKnown RBP28.44■■■□□ 2.14
TNFRSF25-206ENST00000414040 COL1A1P02452 1464 aaPredicted RBP28.44■■■□□ 2.14
TNFRSF25-206ENST00000414040 OTOFQ9HC10 1997 aa28.43■■■□□ 2.14
TNFRSF25-206ENST00000414040 RBM5P52756 815 aaKnown RBP eCLIP28.43■■■□□ 2.14
TNFRSF25-206ENST00000414040 PUM3Q15397 648 aaKnown RBP28.43■■■□□ 2.14
TNFRSF25-206ENST00000414040 INTS3Q68E01 1043 aaKnown RBP28.43■■■□□ 2.14
TNFRSF25-206ENST00000414040 VPS37DQ86XT2 251 aa28.43■■■□□ 2.14
TNFRSF25-206ENST00000414040 PA2G4Q9UQ80 394 aaKnown RBP28.43■■■□□ 2.14
TNFRSF25-206ENST00000414040 TRIM27P14373 513 aa28.42■■■□□ 2.14
TNFRSF25-206ENST00000414040 ARHGAP45Q92619 1136 aa28.42■■■□□ 2.14
TNFRSF25-206ENST00000414040 VEZTQ9HBM0 779 aa28.42■■■□□ 2.14
TNFRSF25-206ENST00000414040 CA12O43570 354 aa28.41■■■□□ 2.14
TNFRSF25-206ENST00000414040 CAVIN4Q5BKX8 364 aa28.41■■■□□ 2.14
TNFRSF25-206ENST00000414040 CSRNP1Q96S65 589 aa28.41■■■□□ 2.14
TNFRSF25-206ENST00000414040 NF2P35240 595 aa28.4■■■□□ 2.14
TNFRSF25-206ENST00000414040 FRAT1Q92837 279 aaPredicted RBP28.4■■■□□ 2.14
TNFRSF25-206ENST00000414040 TDRD3Q9H7E2 651 aaKnown RBP28.39■■■□□ 2.14
TNFRSF25-206ENST00000414040 MYO1BO43795 1136 aa28.38■■■□□ 2.13
TNFRSF25-206ENST00000414040 FRAT2O75474 233 aaPredicted RBP28.38■■■□□ 2.13
TNFRSF25-206ENST00000414040 IFIT1P09914 478 aaKnown RBP28.38■■■□□ 2.13
TNFRSF25-206ENST00000414040 CRKP46108 304 aa28.38■■■□□ 2.13
TNFRSF25-206ENST00000414040 CLUAP1Q96AJ1 413 aa28.38■■■□□ 2.13
TNFRSF25-206ENST00000414040 SERPINA10Q9UK55 444 aa28.38■■■□□ 2.13
TNFRSF25-206ENST00000414040 ANGEL1Q9UNK9 670 aaKnown RBP28.38■■■□□ 2.13
TNFRSF25-206ENST00000414040 LAMB1P07942 1786 aa28.37■■■□□ 2.13
TNFRSF25-206ENST00000414040 MKRN3Q13064 507 aaKnown RBP28.37■■■□□ 2.13
TNFRSF25-206ENST00000414040 RNF186Q9NXI6 227 aa28.37■■■□□ 2.13
TNFRSF25-206ENST00000414040 ZNF70Q9UC06 446 aaPredicted RBP28.37■■■□□ 2.13
TNFRSF25-206ENST00000414040 TRPA1O75762 1119 aa28.36■■■□□ 2.13
TNFRSF25-206ENST00000414040 CIAO1O76071 339 aa28.36■■■□□ 2.13
TNFRSF25-206ENST00000414040 SLC5A1P13866 664 aa28.36■■■□□ 2.13
TNFRSF25-206ENST00000414040 SPDYE2Q495Y8 402 aa28.36■■■□□ 2.13
TNFRSF25-206ENST00000414040 NBPF12Q5TAG4 269 aaPredicted RBP28.36■■■□□ 2.13
TNFRSF25-206ENST00000414040 ATF7IPQ6VMQ6 1270 aa28.36■■■□□ 2.13
TNFRSF25-206ENST00000414040 CDAN1Q8IWY9 1227 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms