RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 SLC5A1P13866 664 aa12.51□□□□□ -0.41
TMEM248-202ENST00000413593 HTRA3P83110 453 aa12.51□□□□□ -0.41
TMEM248-202ENST00000413593 ATP8B2P98198 1209 aa12.51□□□□□ -0.41
TMEM248-202ENST00000413593 POLA2Q14181 598 aa12.51□□□□□ -0.41
TMEM248-202ENST00000413593 ATP2B3Q16720 1220 aa12.51□□□□□ -0.41
TMEM248-202ENST00000413593 CAVIN4Q5BKX8 364 aa12.51□□□□□ -0.41
TMEM248-202ENST00000413593 VPS37DQ86XT2 251 aa12.51□□□□□ -0.41
TMEM248-202ENST00000413593 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.51□□□□□ -0.41
TMEM248-202ENST00000413593 SSH3Q8TE77 659 aa12.51□□□□□ -0.41
TMEM248-202ENST00000413593 MYOZ2Q9NPC6 264 aa12.51□□□□□ -0.41
TMEM248-202ENST00000413593 DDX19BQ9UMR2 479 aa12.51□□□□□ -0.41
TMEM248-202ENST00000413593 JAG2Q9Y219 1238 aa12.51□□□□□ -0.41
TMEM248-202ENST00000413593 COG6Q9Y2V7 657 aa12.51□□□□□ -0.41
TMEM248-202ENST00000413593 FAM205AQ6ZU69 1335 aa12.51□□□□□ -0.41
TMEM248-202ENST00000413593 BCAMP50895 628 aa12.5□□□□□ -0.41
TMEM248-202ENST00000413593 FKBP1AP62942 108 aaKnown RBP12.5□□□□□ -0.41
TMEM248-202ENST00000413593 PDE3AQ14432 1141 aa12.5□□□□□ -0.41
TMEM248-202ENST00000413593 C20orf194Q5TEA3 1177 aa12.5□□□□□ -0.41
TMEM248-202ENST00000413593 KIAA0825Q8IV33 1275 aa12.5□□□□□ -0.41
TMEM248-202ENST00000413593 OGFOD1Q8N543 542 aa12.5□□□□□ -0.41
TMEM248-202ENST00000413593 ASTN2O75129 1339 aaPredicted RBP12.49□□□□□ -0.41
TMEM248-202ENST00000413593 MMP14P50281 582 aa12.49□□□□□ -0.41
TMEM248-202ENST00000413593 FMR1Q06787 632 aaKnown RBP eCLIP12.49□□□□□ -0.417e-6■□□□□ 8.9
TMEM248-202ENST00000413593 TFCP2Q12800 502 aa12.49□□□□□ -0.41
TMEM248-202ENST00000413593 CEP85Q6P2H3 762 aa12.49□□□□□ -0.41
TMEM248-202ENST00000413593 GLIS2Q9BZE0 524 aaPredicted RBP12.49□□□□□ -0.41
TMEM248-202ENST00000413593 ZBTB40Q9NUA8 1239 aa12.49□□□□□ -0.41
TMEM248-202ENST00000413593 IQSEC3Q9UPP2 1182 aaPredicted RBP12.49□□□□□ -0.41
TMEM248-202ENST00000413593 PSME4Q14997 1843 aa12.48□□□□□ -0.41
TMEM248-202ENST00000413593 TRAF5O00463 557 aa12.48□□□□□ -0.41
TMEM248-202ENST00000413593 G3BP1Q13283 466 aaKnown RBP eCLIP12.48□□□□□ -0.41
TMEM248-202ENST00000413593 SCARF1Q14162 830 aa12.48□□□□□ -0.41
TMEM248-202ENST00000413593 MFSD14BQ5SR56 506 aa12.48□□□□□ -0.41
TMEM248-202ENST00000413593 CDC37L1Q7L3B6 337 aa12.48□□□□□ -0.41
TMEM248-202ENST00000413593 DNAJC5GQ8N7S2 189 aa12.48□□□□□ -0.41
TMEM248-202ENST00000413593 CREBZFQ9NS37 354 aa12.48□□□□□ -0.41
TMEM248-202ENST00000413593 GGA3Q9NZ52 723 aa12.48□□□□□ -0.41
TMEM248-202ENST00000413593 HDAC9Q9UKV0 1011 aa12.48□□□□□ -0.41
TMEM248-202ENST00000413593 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.48□□□□□ -0.41
TMEM248-202ENST00000413593 ZNF646O15015 1829 aaPredicted RBP12.48□□□□□ -0.41
TMEM248-202ENST00000413593 TMEM88BA6NKF7 163 aa12.47□□□□□ -0.41
TMEM248-202ENST00000413593 F8W031 263 aaPredicted RBP12.47□□□□□ -0.41
TMEM248-202ENST00000413593 FRAT2O75474 233 aaPredicted RBP12.47□□□□□ -0.41
TMEM248-202ENST00000413593 TIMM10P62072 90 aa12.47□□□□□ -0.41
TMEM248-202ENST00000413593 CHAF1AQ13111 956 aaPredicted RBP12.47□□□□□ -0.41
TMEM248-202ENST00000413593 NBPF9Q3BBW0 867 aa12.47□□□□□ -0.41
TMEM248-202ENST00000413593 ANGEL2Q5VTE6 544 aaKnown RBP12.47□□□□□ -0.41
TMEM248-202ENST00000413593 KRT26Q7Z3Y9 468 aa12.47□□□□□ -0.41
TMEM248-202ENST00000413593 USP48Q86UV5 1035 aa12.47□□□□□ -0.41
TMEM248-202ENST00000413593 DCPSQ96C86 337 aaKnown RBP12.47□□□□□ -0.41
TMEM248-202ENST00000413593 ZBED3Q96IU2 234 aaPredicted RBP12.47□□□□□ -0.41
TMEM248-202ENST00000413593 CHMP4BQ9H444 224 aaKnown RBP12.47□□□□□ -0.41
TMEM248-202ENST00000413593 AKAP2Q9Y2D5 859 aa12.47□□□□□ -0.41
TMEM248-202ENST00000413593 NOP58Q9Y2X3 529 aaKnown RBP12.47□□□□□ -0.41
TMEM248-202ENST00000413593 A0A1B0GUL7 405 aa12.46□□□□□ -0.41
TMEM248-202ENST00000413593 WNT10BO00744 389 aa12.46□□□□□ -0.41
TMEM248-202ENST00000413593 SURF6O75683 361 aaKnown RBP12.46□□□□□ -0.41
TMEM248-202ENST00000413593 ADORA1P30542 326 aa12.46□□□□□ -0.41
TMEM248-202ENST00000413593 DSG3P32926 999 aa12.46□□□□□ -0.41
TMEM248-202ENST00000413593 PHKA1P46020 1223 aa12.46□□□□□ -0.41
TMEM248-202ENST00000413593 TBC1D22AQ8WUA7 517 aa12.46□□□□□ -0.41
TMEM248-202ENST00000413593 PITPNM2Q9BZ72 1349 aa12.45□□□□□ -0.42
TMEM248-202ENST00000413593 ADM5C9JUS6 153 aa12.45□□□□□ -0.42
TMEM248-202ENST00000413593 RRP1P56182 461 aaKnown RBP12.45□□□□□ -0.42
TMEM248-202ENST00000413593 OS9Q13438 667 aaPredicted RBP12.45□□□□□ -0.42
TMEM248-202ENST00000413593 DLGAP5Q15398 846 aa12.45□□□□□ -0.42
TMEM248-202ENST00000413593 CST9Q5W186 159 aa12.45□□□□□ -0.42
TMEM248-202ENST00000413593 CCDC102BQ68D86 513 aa12.45□□□□□ -0.42
TMEM248-202ENST00000413593 DLK2Q6UY11 383 aa12.45□□□□□ -0.42
TMEM248-202ENST00000413593 SULF1Q8IWU6 871 aa12.45□□□□□ -0.42
TMEM248-202ENST00000413593 RPAP2Q8IXW5 612 aaPredicted RBP12.45□□□□□ -0.42
TMEM248-202ENST00000413593 MTMR14Q8NCE2 650 aa12.45□□□□□ -0.42
TMEM248-202ENST00000413593 KLRG1Q96E93 195 aa12.45□□□□□ -0.42
TMEM248-202ENST00000413593 XAGE2Q96GT9 111 aa12.45□□□□□ -0.42
TMEM248-202ENST00000413593 GNL3LQ9NVN8 582 aaKnown RBP12.45□□□□□ -0.42
TMEM248-202ENST00000413593 COL1A1P02452 1464 aaPredicted RBP12.45□□□□□ -0.42
TMEM248-202ENST00000413593 SEMA3EO15041 775 aa12.44□□□□□ -0.42
TMEM248-202ENST00000413593 CELF2O95319 508 aaKnown RBP12.44□□□□□ -0.42
TMEM248-202ENST00000413593 GRIK5Q16478 980 aa12.44□□□□□ -0.42
TMEM248-202ENST00000413593 CFAP100Q494V2 611 aa12.44□□□□□ -0.42
TMEM248-202ENST00000413593 SIRT2Q8IXJ6 389 aa12.44□□□□□ -0.42
TMEM248-202ENST00000413593 WDR66Q8TBY9 1149 aa12.44□□□□□ -0.42
TMEM248-202ENST00000413593 NEUROD6Q96NK8 337 aa12.44□□□□□ -0.42
TMEM248-202ENST00000413593 GPR108Q9NPR9 543 aa12.44□□□□□ -0.42
TMEM248-202ENST00000413593 TTF2Q9UNY4 1162 aaKnown RBP12.44□□□□□ -0.42
TMEM248-202ENST00000413593 PCDHAC2Q9Y5I4 1007 aa12.44□□□□□ -0.42
TMEM248-202ENST00000413593 CEP350Q5VT06 3117 aa12.44□□□□□ -0.42
TMEM248-202ENST00000413593 SPDYE2BA6NHP3 402 aa12.43□□□□□ -0.42
TMEM248-202ENST00000413593 SPDYE6P0CI01 402 aa12.43□□□□□ -0.42
TMEM248-202ENST00000413593 TNNI3KQ59H18 835 aa12.43□□□□□ -0.42
TMEM248-202ENST00000413593 ZNF408Q9H9D4 720 aa12.43□□□□□ -0.42
TMEM248-202ENST00000413593 SERPINA10Q9UK55 444 aa12.43□□□□□ -0.42
TMEM248-202ENST00000413593 DENND2AQ9ULE3 1009 aa12.43□□□□□ -0.42
TMEM248-202ENST00000413593 EXOC6BQ9Y2D4 811 aa12.43□□□□□ -0.42
TMEM248-202ENST00000413593 SUGT1Q9Y2Z0 365 aa12.43□□□□□ -0.42
TMEM248-202ENST00000413593 FPGT-TNNI3KV9GXZ4 949 aa12.43□□□□□ -0.42
TMEM248-202ENST00000413593 CNTNAP1P78357 1384 aa12.43□□□□□ -0.42
TMEM248-202ENST00000413593 AOX1Q06278 1338 aa12.42□□□□□ -0.42
TMEM248-202ENST00000413593 HMMRO75330 724 aa12.42□□□□□ -0.42
TMEM248-202ENST00000413593 RBM5P52756 815 aaKnown RBP eCLIP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms