RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 RNF113AO15541 343 aaKnown RBP20.48■□□□□ 0.87
SDCBP-202ENST00000413219 DHX16O60231 1041 aaKnown RBP20.48■□□□□ 0.87
SDCBP-202ENST00000413219 SLC3A2P08195 630 aaKnown RBP20.48■□□□□ 0.87
SDCBP-202ENST00000413219 TMC6Q7Z403 805 aa20.48■□□□□ 0.87
SDCBP-202ENST00000413219 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.48■□□□□ 0.87
SDCBP-202ENST00000413219 V9GYY5 206 aaPredicted RBP20.48■□□□□ 0.87
SDCBP-202ENST00000413219 ARFGEF2Q9Y6D5 1785 aa20.48■□□□□ 0.87
SDCBP-202ENST00000413219 MAST3O60307 1309 aa20.48■□□□□ 0.87
SDCBP-202ENST00000413219 IKBKBO14920 756 aa20.47■□□□□ 0.87
SDCBP-202ENST00000413219 SPTLC2O15270 562 aa20.47■□□□□ 0.87
SDCBP-202ENST00000413219 SMC2O95347 1197 aa20.47■□□□□ 0.87
SDCBP-202ENST00000413219 NAP1L2Q9ULW6 460 aaPredicted RBP20.47■□□□□ 0.87
SDCBP-202ENST00000413219 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.47■□□□□ 0.87
SDCBP-202ENST00000413219 BMS1Q14692 1282 aaKnown RBP20.47■□□□□ 0.87
SDCBP-202ENST00000413219 LMBR1LQ6UX01 489 aa20.47■□□□□ 0.87
SDCBP-202ENST00000413219 ATG9AQ7Z3C6 839 aa20.47■□□□□ 0.87
SDCBP-202ENST00000413219 ERCC4Q92889 916 aaPredicted RBP20.47■□□□□ 0.87
SDCBP-202ENST00000413219 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.47■□□□□ 0.87
SDCBP-202ENST00000413219 AXIN2Q9Y2T1 843 aa20.47■□□□□ 0.87
SDCBP-202ENST00000413219 PLEKHG2Q9H7P9 1386 aa20.47■□□□□ 0.87
SDCBP-202ENST00000413219 PHKG2P15735 406 aa20.46■□□□□ 0.87
SDCBP-202ENST00000413219 IL15P40933 162 aaPredicted RBP20.46■□□□□ 0.87
SDCBP-202ENST00000413219 NCAPHQ15003 741 aa20.46■□□□□ 0.87
SDCBP-202ENST00000413219 FBXO18Q8NFZ0 1043 aa20.46■□□□□ 0.87
SDCBP-202ENST00000413219 PLBD2Q8NHP8 589 aa20.46■□□□□ 0.87
SDCBP-202ENST00000413219 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.46■□□□□ 0.87
SDCBP-202ENST00000413219 RAPGEF4Q8WZA2 1011 aa20.46■□□□□ 0.87
SDCBP-202ENST00000413219 C8orf76Q96K31 380 aa20.46■□□□□ 0.87
SDCBP-202ENST00000413219 CLIC4Q9Y696 253 aa20.46■□□□□ 0.87
SDCBP-202ENST00000413219 FOXO4P98177 505 aa20.46■□□□□ 0.87
SDCBP-202ENST00000413219 MYSM1Q5VVJ2 828 aa20.46■□□□□ 0.87
SDCBP-202ENST00000413219 NFATC2IPQ8NCF5 419 aa20.46■□□□□ 0.87
SDCBP-202ENST00000413219 CMA1P23946 247 aa20.45■□□□□ 0.86
SDCBP-202ENST00000413219 LRRFIP1Q32MZ4 808 aaKnown RBP20.45■□□□□ 0.86
SDCBP-202ENST00000413219 TIGD1Q96MW7 591 aa20.45■□□□□ 0.86
SDCBP-202ENST00000413219 NEUROD6Q96NK8 337 aa20.45■□□□□ 0.86
SDCBP-202ENST00000413219 PHLPP2Q6ZVD8 1323 aa20.45■□□□□ 0.86
SDCBP-202ENST00000413219 H7C1W4 665 aa20.44■□□□□ 0.86
SDCBP-202ENST00000413219 ZNF202O95125 648 aa20.44■□□□□ 0.86
SDCBP-202ENST00000413219 SYT10Q6XYQ8 523 aa20.44■□□□□ 0.86
SDCBP-202ENST00000413219 FMNL2Q96PY5 1086 aa20.44■□□□□ 0.86
SDCBP-202ENST00000413219 ZNF446Q9NWS9 450 aa20.44■□□□□ 0.86
SDCBP-202ENST00000413219 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.44■□□□□ 0.86
SDCBP-202ENST00000413219 CCDC66A2RUB6 948 aa20.44■□□□□ 0.86
SDCBP-202ENST00000413219 TTC5Q8N0Z6 440 aa20.44■□□□□ 0.86
SDCBP-202ENST00000413219 FBXW7Q969H0 707 aa20.44■□□□□ 0.86
SDCBP-202ENST00000413219 A0A0G2JLW4 131 aa20.43■□□□□ 0.86
SDCBP-202ENST00000413219 IFIT1P09914 478 aaKnown RBP20.43■□□□□ 0.86
SDCBP-202ENST00000413219 ETF1P62495 437 aaKnown RBP20.43■□□□□ 0.86
SDCBP-202ENST00000413219 AXDND1Q5T1B0 1012 aaPredicted RBP20.43■□□□□ 0.86
SDCBP-202ENST00000413219 SYNE3Q6ZMZ3 975 aa20.43■□□□□ 0.86
SDCBP-202ENST00000413219 ATP5J2-PTCD1G3V325 749 aa20.42■□□□□ 0.86
SDCBP-202ENST00000413219 CBFA2T2O43439 604 aa20.42■□□□□ 0.86
SDCBP-202ENST00000413219 MYO1BO43795 1136 aa20.42■□□□□ 0.86
SDCBP-202ENST00000413219 PTCD1O75127 700 aaKnown RBP20.42■□□□□ 0.86
SDCBP-202ENST00000413219 TATP17735 454 aaPredicted RBP20.42■□□□□ 0.86
SDCBP-202ENST00000413219 FANCCQ00597 558 aa20.42■□□□□ 0.86
SDCBP-202ENST00000413219 ANO1Q5XXA6 986 aa20.42■□□□□ 0.86
SDCBP-202ENST00000413219 SRRTQ9BXP5 876 aaKnown RBP20.42■□□□□ 0.86
SDCBP-202ENST00000413219 ORC3Q9UBD5 711 aaPredicted RBP20.42■□□□□ 0.86
SDCBP-202ENST00000413219 WDR19Q8NEZ3 1342 aa20.42■□□□□ 0.86
SDCBP-202ENST00000413219 KIF1AQ12756 1690 aa20.42■□□□□ 0.86
SDCBP-202ENST00000413219 MST1RQ04912 1400 aa20.42■□□□□ 0.86
SDCBP-202ENST00000413219 ERCC6LQ2NKX8 1250 aa20.42■□□□□ 0.86
SDCBP-202ENST00000413219 CHST3Q7LGC8 479 aa20.42■□□□□ 0.86
SDCBP-202ENST00000413219 IFNL2Q8IZJ0 200 aa20.42■□□□□ 0.86
SDCBP-202ENST00000413219 TRPM3Q9HCF6 1732 aaPredicted RBP20.41■□□□□ 0.86
SDCBP-202ENST00000413219 M0R2C6 588 aa20.41■□□□□ 0.86
SDCBP-202ENST00000413219 IMMTQ16891 758 aaKnown RBP20.41■□□□□ 0.86
SDCBP-202ENST00000413219 FCHSD1Q86WN1 690 aa20.41■□□□□ 0.86
SDCBP-202ENST00000413219 TUBE1Q9UJT0 475 aa20.41■□□□□ 0.86
SDCBP-202ENST00000413219 CIAO1O76071 339 aa20.41■□□□□ 0.86
SDCBP-202ENST00000413219 POLR3DP05423 398 aaPredicted RBP20.41■□□□□ 0.86
SDCBP-202ENST00000413219 ZFYP08048 801 aaPredicted RBP20.41■□□□□ 0.86
SDCBP-202ENST00000413219 PFKFB1P16118 471 aa20.41■□□□□ 0.86
SDCBP-202ENST00000413219 TIMM10P62072 90 aa20.41■□□□□ 0.86
SDCBP-202ENST00000413219 BCL11BQ9C0K0 894 aaPredicted RBP20.41■□□□□ 0.86
SDCBP-202ENST00000413219 ATG3Q9NT62 314 aa20.41■□□□□ 0.86
SDCBP-202ENST00000413219 HPS5Q9UPZ3 1129 aa20.41■□□□□ 0.86
SDCBP-202ENST00000413219 EYA2O00167 538 aa20.4■□□□□ 0.86
SDCBP-202ENST00000413219 PPFIA3O75145 1194 aa20.4■□□□□ 0.86
SDCBP-202ENST00000413219 KIF23Q02241 960 aaPredicted RBP20.4■□□□□ 0.86
SDCBP-202ENST00000413219 TTLL5Q6EMB2 1281 aa20.4■□□□□ 0.86
SDCBP-202ENST00000413219 OTUD7BQ6GQQ9 843 aa20.4■□□□□ 0.86
SDCBP-202ENST00000413219 MB21D2Q8IYB1 491 aaPredicted RBP20.4■□□□□ 0.86
SDCBP-202ENST00000413219 DCAF5Q96JK2 942 aa20.4■□□□□ 0.86
SDCBP-202ENST00000413219 KLF18A0A0U1RQI7 1052 aa20.39■□□□□ 0.86
SDCBP-202ENST00000413219 PRC1O43663 620 aa20.39■□□□□ 0.86
SDCBP-202ENST00000413219 SLC39A14Q15043 492 aa20.39■□□□□ 0.86
SDCBP-202ENST00000413219 OSBP2Q969R2 916 aa20.39■□□□□ 0.86
SDCBP-202ENST00000413219 TMX1Q9H3N1 280 aa20.39■□□□□ 0.86
SDCBP-202ENST00000413219 CCDC9Q9Y3X0 531 aaKnown RBP20.39■□□□□ 0.86
SDCBP-202ENST00000413219 LAMB4A4D0S4 1761 aa20.39■□□□□ 0.85
SDCBP-202ENST00000413219 GOLGA8BA8MQT2 603 aa20.39■□□□□ 0.85
SDCBP-202ENST00000413219 BIN1O00499 593 aa20.39■□□□□ 0.85
SDCBP-202ENST00000413219 CLCN6P51797 869 aa20.39■□□□□ 0.85
SDCBP-202ENST00000413219 HOMER1Q86YM7 354 aa20.39■□□□□ 0.85
SDCBP-202ENST00000413219 ARGLU1Q9NWB6 273 aaPredicted RBP20.39■□□□□ 0.85
SDCBP-202ENST00000413219 FHOD1Q9Y613 1164 aa20.39■□□□□ 0.85
SDCBP-202ENST00000413219 DDX60Q8IY21 1712 aaKnown RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms