RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 IFIT1P09914 478 aaKnown RBP23.45■■□□□ 1.34
TRIM56-202ENST00000412507 CAVIN4Q5BKX8 364 aa23.45■■□□□ 1.34
TRIM56-202ENST00000412507 ANGEL2Q5VTE6 544 aaKnown RBP23.45■■□□□ 1.34
TRIM56-202ENST00000412507 VPS37DQ86XT2 251 aa23.45■■□□□ 1.34
TRIM56-202ENST00000412507 HDAC9Q9UKV0 1011 aa23.45■■□□□ 1.34
TRIM56-202ENST00000412507 ABT1Q9ULW3 272 aaKnown RBP23.45■■□□□ 1.34
TRIM56-202ENST00000412507 IQSEC3Q9UPP2 1182 aaPredicted RBP23.45■■□□□ 1.34
TRIM56-202ENST00000412507 CNTNAP1P78357 1384 aa23.44■■□□□ 1.34
TRIM56-202ENST00000412507 ADM5C9JUS6 153 aa23.44■■□□□ 1.34
TRIM56-202ENST00000412507 CELF2O95319 508 aaKnown RBP23.44■■□□□ 1.34
TRIM56-202ENST00000412507 IL15P40933 162 aaPredicted RBP23.44■■□□□ 1.34
TRIM56-202ENST00000412507 FKBP1AP62942 108 aaKnown RBP23.44■■□□□ 1.34
TRIM56-202ENST00000412507 NBPF9Q3BBW0 867 aa23.44■■□□□ 1.34
TRIM56-202ENST00000412507 JMYQ8N9B5 988 aa23.44■■□□□ 1.34
TRIM56-202ENST00000412507 PANK1Q8TE04 598 aa23.44■■□□□ 1.34
TRIM56-202ENST00000412507 ZNF408Q9H9D4 720 aa23.44■■□□□ 1.34
TRIM56-202ENST00000412507 CEP126Q9P2H0 1117 aa23.44■■□□□ 1.34
TRIM56-202ENST00000412507 RCAN3Q9UKA8 241 aa23.44■■□□□ 1.34
TRIM56-202ENST00000412507 PNMA6EA0A0J9YXQ4 647 aa23.43■■□□□ 1.34
TRIM56-202ENST00000412507 F8W031 263 aaPredicted RBP23.43■■□□□ 1.34
TRIM56-202ENST00000412507 SLC5A1P13866 664 aa23.43■■□□□ 1.34
TRIM56-202ENST00000412507 BCAMP50895 628 aa23.43■■□□□ 1.34
TRIM56-202ENST00000412507 LPIN2Q92539 896 aa23.43■■□□□ 1.34
TRIM56-202ENST00000412507 WNT10BO00744 389 aa23.42■■□□□ 1.34
TRIM56-202ENST00000412507 MMP14P50281 582 aa23.42■■□□□ 1.34
TRIM56-202ENST00000412507 SULF1Q8IWU6 871 aa23.42■■□□□ 1.34
TRIM56-202ENST00000412507 C1orf115Q9H7X2 142 aa23.42■■□□□ 1.34
TRIM56-202ENST00000412507 ZBTB7BO15156 539 aaPredicted RBP23.41■■□□□ 1.34
TRIM56-202ENST00000412507 FRAT2O75474 233 aaPredicted RBP23.41■■□□□ 1.34
TRIM56-202ENST00000412507 ATP2B3Q16720 1220 aa23.41■■□□□ 1.34
TRIM56-202ENST00000412507 DEFB115Q30KQ5 88 aa23.41■■□□□ 1.34
TRIM56-202ENST00000412507 MFSD14BQ5SR56 506 aa23.41■■□□□ 1.34
TRIM56-202ENST00000412507 PCNTO95613 3336 aa23.41■■□□□ 1.34
TRIM56-202ENST00000412507 RASSF10A6NK89 507 aa23.4■■□□□ 1.34
TRIM56-202ENST00000412507 CHAF1AQ13111 956 aaPredicted RBP23.4■■□□□ 1.34
TRIM56-202ENST00000412507 SCAF8Q9UPN6 1271 aaKnown RBP23.4■■□□□ 1.34
TRIM56-202ENST00000412507 PITPNM2Q9BZ72 1349 aa23.39■■□□□ 1.34
TRIM56-202ENST00000412507 MS4A1P11836 297 aa23.38■■□□□ 1.33
TRIM56-202ENST00000412507 VEGFBP49765 207 aa23.38■■□□□ 1.33
TRIM56-202ENST00000412507 ZBED3Q96IU2 234 aaPredicted RBP23.38■■□□□ 1.33
TRIM56-202ENST00000412507 PCDHAC2Q9Y5I4 1007 aa23.38■■□□□ 1.33
TRIM56-202ENST00000412507 TLL2Q9Y6L7 1015 aa23.38■■□□□ 1.33
TRIM56-202ENST00000412507 ATP8B2P98198 1209 aa23.37■■□□□ 1.33
TRIM56-202ENST00000412507 TFCP2Q12800 502 aa23.37■■□□□ 1.33
TRIM56-202ENST00000412507 DLGAP5Q15398 846 aa23.37■■□□□ 1.33
TRIM56-202ENST00000412507 CDCA5Q96FF9 252 aa23.37■■□□□ 1.33
TRIM56-202ENST00000412507 CFAP100Q494V2 611 aa23.36■■□□□ 1.33
TRIM56-202ENST00000412507 TTF2Q9UNY4 1162 aaKnown RBP23.36■■□□□ 1.33
TRIM56-202ENST00000412507 G3BP1Q13283 466 aaKnown RBP eCLIP23.35■■□□□ 1.33
TRIM56-202ENST00000412507 POLA2Q14181 598 aa23.35■■□□□ 1.33
TRIM56-202ENST00000412507 GRIK5Q16478 980 aa23.35■■□□□ 1.33
TRIM56-202ENST00000412507 PAXIP1Q6ZW49 1069 aaPredicted RBP23.35■■□□□ 1.33
TRIM56-202ENST00000412507 SAPCD2Q86UD0 394 aa23.35■■□□□ 1.33
TRIM56-202ENST00000412507 MTMR14Q8NCE2 650 aa23.35■■□□□ 1.33
TRIM56-202ENST00000412507 SSH3Q8TE77 659 aa23.35■■□□□ 1.33
TRIM56-202ENST00000412507 ADORA1P30542 326 aa23.34■■□□□ 1.33
TRIM56-202ENST00000412507 RBM5P52756 815 aaKnown RBP eCLIP23.34■■□□□ 1.33
TRIM56-202ENST00000412507 TIMM10P62072 90 aa23.34■■□□□ 1.33
TRIM56-202ENST00000412507 TBC1D22AQ8WUA7 517 aa23.34■■□□□ 1.33
TRIM56-202ENST00000412507 YTHDC1Q96MU7 727 aaKnown RBP23.34■■□□□ 1.33
TRIM56-202ENST00000412507 COG6Q9Y2V7 657 aa23.34■■□□□ 1.33
TRIM56-202ENST00000412507 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.34■■□□□ 1.33
TRIM56-202ENST00000412507 COL1A1P02452 1464 aaPredicted RBP23.34■■□□□ 1.33
TRIM56-202ENST00000412507 MYH2Q9UKX2 1941 aa23.33■■□□□ 1.33
TRIM56-202ENST00000412507 PHKA1P46020 1223 aa23.33■■□□□ 1.33
TRIM56-202ENST00000412507 MVPQ14764 893 aaKnown RBP23.33■■□□□ 1.33
TRIM56-202ENST00000412507 CYP4F22Q6NT55 531 aa23.33■■□□□ 1.33
TRIM56-202ENST00000412507 PRMT6Q96LA8 375 aaPredicted RBP23.33■■□□□ 1.33
TRIM56-202ENST00000412507 GBA2Q9HCG7 927 aaPredicted RBP23.33■■□□□ 1.33
TRIM56-202ENST00000412507 AKAP2Q9Y2D5 859 aa23.33■■□□□ 1.33
TRIM56-202ENST00000412507 THSD7BQ9C0I4 1608 aa23.33■■□□□ 1.32
TRIM56-202ENST00000412507 WDR33Q9C0J8 1336 aaKnown RBP23.33■■□□□ 1.32
TRIM56-202ENST00000412507 A0A1B0GUL7 405 aa23.32■■□□□ 1.32
TRIM56-202ENST00000412507 SPDYE2BA6NHP3 402 aa23.32■■□□□ 1.32
TRIM56-202ENST00000412507 SPDYE6P0CI01 402 aa23.32■■□□□ 1.32
TRIM56-202ENST00000412507 GRM1Q13255 1194 aa23.32■■□□□ 1.32
TRIM56-202ENST00000412507 PRAMEF18Q5VWM3 479 aa23.32■■□□□ 1.32
TRIM56-202ENST00000412507 C2orf69Q8N8R5 385 aa23.32■■□□□ 1.32
TRIM56-202ENST00000412507 GNL3LQ9NVN8 582 aaKnown RBP23.32■■□□□ 1.32
TRIM56-202ENST00000412507 PAPPA2Q9BXP8 1791 aa23.32■■□□□ 1.32
TRIM56-202ENST00000412507 AOX1Q06278 1338 aa23.32■■□□□ 1.32
TRIM56-202ENST00000412507 HUNKP57058 714 aa23.31■■□□□ 1.32
TRIM56-202ENST00000412507 APOBEC3FQ8IUX4 373 aaKnown RBP23.31■■□□□ 1.32
TRIM56-202ENST00000412507 CAPNS2Q96L46 248 aa23.31■■□□□ 1.32
TRIM56-202ENST00000412507 SERPINA10Q9UK55 444 aa23.31■■□□□ 1.32
TRIM56-202ENST00000412507 CLRN2A0PK11 232 aa23.3■■□□□ 1.32
TRIM56-202ENST00000412507 CCDC102BQ68D86 513 aa23.3■■□□□ 1.32
TRIM56-202ENST00000412507 CEP85Q6P2H3 762 aa23.3■■□□□ 1.32
TRIM56-202ENST00000412507 XAGE2Q96GT9 111 aa23.3■■□□□ 1.32
TRIM56-202ENST00000412507 NEUROD6Q96NK8 337 aa23.3■■□□□ 1.32
TRIM56-202ENST00000412507 DDX19BQ9UMR2 479 aa23.3■■□□□ 1.32
TRIM56-202ENST00000412507 MYO1BO43795 1136 aa23.29■■□□□ 1.32
TRIM56-202ENST00000412507 SURF6O75683 361 aaKnown RBP23.29■■□□□ 1.32
TRIM56-202ENST00000412507 ECE1P42892 770 aa23.29■■□□□ 1.32
TRIM56-202ENST00000412507 CRKP46108 304 aa23.29■■□□□ 1.32
TRIM56-202ENST00000412507 WDR66Q8TBY9 1149 aa23.29■■□□□ 1.32
TRIM56-202ENST00000412507 HHIPL1Q96JK4 782 aa23.29■■□□□ 1.32
TRIM56-202ENST00000412507 AK9Q5TCS8 1911 aa23.29■■□□□ 1.32
TRIM56-202ENST00000412507 MYO5AQ9Y4I1 1855 aaKnown RBP23.28■■□□□ 1.32
TRIM56-202ENST00000412507 AKAP11Q9UKA4 1901 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms