RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 FKBP1AP62942 108 aaKnown RBP12.74□□□□□ -0.37
LINC01643-201ENST00000412218 ZBED3Q96IU2 234 aaPredicted RBP12.74□□□□□ -0.37
LINC01643-201ENST00000412218 API5Q9BZZ5 524 aaKnown RBP12.74□□□□□ -0.37
LINC01643-201ENST00000412218 HDAC9Q9UKV0 1011 aa12.74□□□□□ -0.37
LINC01643-201ENST00000412218 FAM155AB1AL88 458 aaPredicted RBP12.73□□□□□ -0.37
LINC01643-201ENST00000412218 LRRC24Q50LG9 513 aa12.73□□□□□ -0.37
LINC01643-201ENST00000412218 RGMBQ6NW40 437 aa12.73□□□□□ -0.37
LINC01643-201ENST00000412218 VGLL2Q8N8G2 317 aa12.73□□□□□ -0.37
LINC01643-201ENST00000412218 KLHDC4Q8TBB5 520 aa12.73□□□□□ -0.37
LINC01643-201ENST00000412218 SCAF8Q9UPN6 1271 aaKnown RBP12.73□□□□□ -0.37
LINC01643-201ENST00000412218 PAPPA2Q9BXP8 1791 aa12.73□□□□□ -0.37
LINC01643-201ENST00000412218 FAM205AQ6ZU69 1335 aa12.72□□□□□ -0.37
LINC01643-201ENST00000412218 KIF16BQ96L93 1317 aa12.72□□□□□ -0.37
LINC01643-201ENST00000412218 GYG1P46976 350 aa12.72□□□□□ -0.37
LINC01643-201ENST00000412218 RFX5P48382 616 aaPredicted RBP12.72□□□□□ -0.37
LINC01643-201ENST00000412218 LBX1P52954 281 aa12.72□□□□□ -0.37
LINC01643-201ENST00000412218 FKBP1BP68106 108 aa12.72□□□□□ -0.37
LINC01643-201ENST00000412218 NOGQ13253 232 aa12.72□□□□□ -0.37
LINC01643-201ENST00000412218 METTL24Q5JXM2 366 aa12.72□□□□□ -0.37
LINC01643-201ENST00000412218 TDRD7Q8NHU6 1098 aaKnown RBP12.72□□□□□ -0.37
LINC01643-201ENST00000412218 FAM84BQ96KN1 310 aaPredicted RBP12.72□□□□□ -0.37
LINC01643-201ENST00000412218 JAG2Q9Y219 1238 aa12.72□□□□□ -0.37
LINC01643-201ENST00000412218 UBTFL1P0CB47 393 aaPredicted RBP12.71□□□□□ -0.37
LINC01643-201ENST00000412218 HIBADHP31937 336 aaKnown RBP12.71□□□□□ -0.37
LINC01643-201ENST00000412218 APOBEC3FQ8IUX4 373 aaKnown RBP12.71□□□□□ -0.37
LINC01643-201ENST00000412218 MTMR14Q8NCE2 650 aa12.71□□□□□ -0.37
LINC01643-201ENST00000412218 ARHGAP45Q92619 1136 aa12.71□□□□□ -0.37
LINC01643-201ENST00000412218 ZIC5Q96T25 663 aa12.71□□□□□ -0.37
LINC01643-201ENST00000412218 BEGAINQ9BUH8 593 aa12.71□□□□□ -0.37
LINC01643-201ENST00000412218 PPP4R2Q9NY27 417 aa12.71□□□□□ -0.37
LINC01643-201ENST00000412218 COL1A1P02452 1464 aaPredicted RBP12.71□□□□□ -0.38
LINC01643-201ENST00000412218 ARAP2Q8WZ64 1704 aa12.71□□□□□ -0.38
LINC01643-201ENST00000412218 F8W031 263 aaPredicted RBP12.7□□□□□ -0.38
LINC01643-201ENST00000412218 PDE8BO95263 885 aa12.7□□□□□ -0.38
LINC01643-201ENST00000412218 SLC10A3P09131 477 aa12.7□□□□□ -0.38
LINC01643-201ENST00000412218 ZNF157P51786 506 aaPredicted RBP12.7□□□□□ -0.38
LINC01643-201ENST00000412218 DLGAP5Q15398 846 aa12.7□□□□□ -0.38
LINC01643-201ENST00000412218 PRAMEF18Q5VWM3 479 aa12.7□□□□□ -0.38
LINC01643-201ENST00000412218 CCDC102AQ96A19 550 aa12.7□□□□□ -0.38
LINC01643-201ENST00000412218 PCDHAC2Q9Y5I4 1007 aa12.7□□□□□ -0.38
LINC01643-201ENST00000412218 EYA2O00167 538 aa12.69□□□□□ -0.38
LINC01643-201ENST00000412218 CA12O43570 354 aa12.69□□□□□ -0.38
LINC01643-201ENST00000412218 PTPN12Q05209 780 aaKnown RBP12.69□□□□□ -0.38
LINC01643-201ENST00000412218 PUM3Q15397 648 aaKnown RBP12.69□□□□□ -0.38
LINC01643-201ENST00000412218 CFAP100Q494V2 611 aa12.69□□□□□ -0.38
LINC01643-201ENST00000412218 MFSD14BQ5SR56 506 aa12.69□□□□□ -0.38
LINC01643-201ENST00000412218 FBXO33Q7Z6M2 555 aa12.69□□□□□ -0.38
LINC01643-201ENST00000412218 MEIS3Q99687 375 aa12.69□□□□□ -0.38
LINC01643-201ENST00000412218 SPDYE2BA6NHP3 402 aa12.68□□□□□ -0.38
LINC01643-201ENST00000412218 SPDYE6P0CI01 402 aa12.68□□□□□ -0.38
LINC01643-201ENST00000412218 FGFR2P21802 821 aa12.68□□□□□ -0.38
LINC01643-201ENST00000412218 CAVIN4Q5BKX8 364 aa12.68□□□□□ -0.38
LINC01643-201ENST00000412218 INTS3Q68E01 1043 aaKnown RBP12.68□□□□□ -0.38
LINC01643-201ENST00000412218 MOB2Q70IA6 237 aa12.68□□□□□ -0.38
LINC01643-201ENST00000412218 ATG9AQ7Z3C6 839 aa12.68□□□□□ -0.38
LINC01643-201ENST00000412218 VPS37DQ86XT2 251 aa12.68□□□□□ -0.38
LINC01643-201ENST00000412218 RASAL3Q86YV0 1011 aa12.68□□□□□ -0.38
LINC01643-201ENST00000412218 TSKSQ9UJT2 592 aa12.68□□□□□ -0.38
LINC01643-201ENST00000412218 RCAN3Q9UKA8 241 aa12.68□□□□□ -0.38
LINC01643-201ENST00000412218 LRRFIP2Q9Y608 721 aaKnown RBP12.68□□□□□ -0.38
LINC01643-201ENST00000412218 AOX1Q06278 1338 aa12.67□□□□□ -0.38
LINC01643-201ENST00000412218 CIAO1O76071 339 aa12.67□□□□□ -0.38
LINC01643-201ENST00000412218 TRIM27P14373 513 aa12.67□□□□□ -0.38
LINC01643-201ENST00000412218 NF2P35240 595 aa12.67□□□□□ -0.38
LINC01643-201ENST00000412218 KIF23Q02241 960 aaPredicted RBP12.67□□□□□ -0.38
LINC01643-201ENST00000412218 PRMT6Q96LA8 375 aaPredicted RBP12.67□□□□□ -0.38
LINC01643-201ENST00000412218 SERPINA10Q9UK55 444 aa12.67□□□□□ -0.38
LINC01643-201ENST00000412218 FBXO3Q9UK99 471 aa12.67□□□□□ -0.38
LINC01643-201ENST00000412218 IQSEC3Q9UPP2 1182 aaPredicted RBP12.67□□□□□ -0.38
LINC01643-201ENST00000412218 HDAC5Q9UQL6 1122 aa12.67□□□□□ -0.38
LINC01643-201ENST00000412218 PPP2R3BQ9Y5P8 575 aa12.67□□□□□ -0.38
LINC01643-201ENST00000412218 SSC5DA1L4H1 1573 aa12.67□□□□□ -0.38
LINC01643-201ENST00000412218 POLR2AP24928 1970 aaKnown RBP12.67□□□□□ -0.38
LINC01643-201ENST00000412218 CLRN2A0PK11 232 aa12.66□□□□□ -0.38
LINC01643-201ENST00000412218 UBE2Q2LH0YL09 131 aa12.66□□□□□ -0.38
LINC01643-201ENST00000412218 MYO1BO43795 1136 aa12.66□□□□□ -0.38
LINC01643-201ENST00000412218 BCAR3O75815 825 aa12.66□□□□□ -0.38
LINC01643-201ENST00000412218 IFIT1P09914 478 aaKnown RBP12.66□□□□□ -0.38
LINC01643-201ENST00000412218 BCAMP50895 628 aa12.66□□□□□ -0.38
LINC01643-201ENST00000412218 RRP1P56182 461 aaKnown RBP12.66□□□□□ -0.38
LINC01643-201ENST00000412218 IRX6P78412 446 aaPredicted RBP12.66□□□□□ -0.38
LINC01643-201ENST00000412218 LPIN2Q92539 896 aa12.66□□□□□ -0.38
LINC01643-201ENST00000412218 SIL1Q9H173 461 aa12.66□□□□□ -0.38
LINC01643-201ENST00000412218 DEFB129Q9H1M3 183 aa12.66□□□□□ -0.38
LINC01643-201ENST00000412218 TTF2Q9UNY4 1162 aaKnown RBP12.66□□□□□ -0.38
LINC01643-201ENST00000412218 ECM29Q5VYK3 1845 aa12.65□□□□□ -0.38
LINC01643-201ENST00000412218 IPO8O15397 1037 aaKnown RBP12.65□□□□□ -0.38
LINC01643-201ENST00000412218 GNAI3P08754 354 aa12.65□□□□□ -0.38
LINC01643-201ENST00000412218 SLC5A1P13866 664 aa12.65□□□□□ -0.38
LINC01643-201ENST00000412218 RBM5P52756 815 aaKnown RBP eCLIP12.65□□□□□ -0.38
LINC01643-201ENST00000412218 CHAF1AQ13111 956 aaPredicted RBP12.65□□□□□ -0.38
LINC01643-201ENST00000412218 TTLL12Q14166 644 aaPredicted RBP12.65□□□□□ -0.38
LINC01643-201ENST00000412218 GRIK5Q16478 980 aa12.65□□□□□ -0.38
LINC01643-201ENST00000412218 ATF7IPQ6VMQ6 1270 aa12.65□□□□□ -0.38
LINC01643-201ENST00000412218 TBC1D22AQ8WUA7 517 aa12.65□□□□□ -0.38
LINC01643-201ENST00000412218 SAGE1Q9NXZ1 904 aa12.65□□□□□ -0.38
LINC01643-201ENST00000412218 TNNQ9UQP3 1299 aa12.65□□□□□ -0.38
LINC01643-201ENST00000412218 FRAT2O75474 233 aaPredicted RBP12.64□□□□□ -0.39
LINC01643-201ENST00000412218 CAPN15O75808 1086 aa12.64□□□□□ -0.39
LINC01643-201ENST00000412218 CRKP46108 304 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms