RNA–Protein interactions for RNA: ENST00000411642.6

TTC39A-207, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best)

Gene TTC39A, Length 931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-207ENST00000411642 DPF2Q92785 391 aa12.4□□□□□ -0.42
TTC39A-207ENST00000411642 KIF1BPQ96EK5 621 aa12.4□□□□□ -0.42
TTC39A-207ENST00000411642 XAGE2Q96GT9 111 aa12.4□□□□□ -0.42
TTC39A-207ENST00000411642 TAF1DQ9H5J8 278 aaPredicted RBP12.4□□□□□ -0.42
TTC39A-207ENST00000411642 IL1RAPL2Q9NP60 686 aa12.4□□□□□ -0.42
TTC39A-207ENST00000411642 COL1A1P02452 1464 aaPredicted RBP12.4□□□□□ -0.43
TTC39A-207ENST00000411642 FAM205AQ6ZU69 1335 aa12.39□□□□□ -0.43
TTC39A-207ENST00000411642 SHTN1A0MZ66 631 aa12.39□□□□□ -0.43
TTC39A-207ENST00000411642 RAB11FIP3O75154 756 aa12.39□□□□□ -0.43
TTC39A-207ENST00000411642 CENPBP07199 599 aaPredicted RBP12.39□□□□□ -0.43
TTC39A-207ENST00000411642 CHAF1AQ13111 956 aaPredicted RBP12.39□□□□□ -0.43
TTC39A-207ENST00000411642 GORABQ5T7V8 394 aa12.39□□□□□ -0.43
TTC39A-207ENST00000411642 CCDC102BQ68D86 513 aa12.39□□□□□ -0.43
TTC39A-207ENST00000411642 GMLQ99445 158 aa12.39□□□□□ -0.43
TTC39A-207ENST00000411642 GNL3LQ9NVN8 582 aaKnown RBP12.39□□□□□ -0.43
TTC39A-207ENST00000411642 CNOT7Q9UIV1 285 aaKnown RBP12.39□□□□□ -0.43
TTC39A-207ENST00000411642 MYH2Q9UKX2 1941 aa12.39□□□□□ -0.43
TTC39A-207ENST00000411642 H7C1D1 291 aa12.38□□□□□ -0.43
TTC39A-207ENST00000411642 EAPPQ56P03 285 aaPredicted RBP12.38□□□□□ -0.43
TTC39A-207ENST00000411642 CERS5Q8N5B7 392 aa12.38□□□□□ -0.43
TTC39A-207ENST00000411642 EAF2Q96CJ1 260 aaPredicted RBP12.38□□□□□ -0.43
TTC39A-207ENST00000411642 DBNDD2Q9BQY9 259 aa12.38□□□□□ -0.43
TTC39A-207ENST00000411642 BCL11AQ9H165 835 aa12.38□□□□□ -0.43
TTC39A-207ENST00000411642 DCTPP1Q9H773 170 aa12.38□□□□□ -0.43
TTC39A-207ENST00000411642 ADARB2Q9NS39 739 aaKnown RBP12.38□□□□□ -0.43
TTC39A-207ENST00000411642 USP17L8P0C7I0 530 aa12.37□□□□□ -0.43
TTC39A-207ENST00000411642 POTEIP0CG38 1075 aa12.37□□□□□ -0.43
TTC39A-207ENST00000411642 POTEJP0CG39 1038 aa12.37□□□□□ -0.43
TTC39A-207ENST00000411642 FKBP1AP62942 108 aaKnown RBP12.37□□□□□ -0.43
TTC39A-207ENST00000411642 MFSD14BQ5SR56 506 aa12.37□□□□□ -0.43
TTC39A-207ENST00000411642 AACSQ86V21 672 aa12.37□□□□□ -0.43
TTC39A-207ENST00000411642 PNMA8AQ86V59 439 aaPredicted RBP12.37□□□□□ -0.43
TTC39A-207ENST00000411642 KIAA0825Q8IV33 1275 aa12.37□□□□□ -0.43
TTC39A-207ENST00000411642 CLASRPQ8N2M8 674 aaKnown RBP12.37□□□□□ -0.43
TTC39A-207ENST00000411642 LRRCC1Q9C099 1032 aa12.37□□□□□ -0.43
TTC39A-207ENST00000411642 CCDC8Q9H0W5 538 aaPredicted RBP12.37□□□□□ -0.43
TTC39A-207ENST00000411642 TLR7Q9NYK1 1049 aaKnown RBP12.37□□□□□ -0.43
TTC39A-207ENST00000411642 DBNLQ9UJU6 430 aaKnown RBP12.37□□□□□ -0.43
TTC39A-207ENST00000411642 F8W031 263 aaPredicted RBP12.36□□□□□ -0.43
TTC39A-207ENST00000411642 SEMA3EO15041 775 aa12.36□□□□□ -0.43
TTC39A-207ENST00000411642 TOMM70O94826 608 aa12.36□□□□□ -0.43
TTC39A-207ENST00000411642 HDAC1Q13547 482 aaPredicted RBP12.36□□□□□ -0.43
TTC39A-207ENST00000411642 RASGRF1Q13972 1273 aa12.36□□□□□ -0.43
TTC39A-207ENST00000411642 TBC1D10BQ4KMP7 808 aaPredicted RBP12.36□□□□□ -0.43
TTC39A-207ENST00000411642 USP50Q70EL3 339 aaPredicted RBP12.36□□□□□ -0.43
TTC39A-207ENST00000411642 SAMD7Q7Z3H4 446 aa12.36□□□□□ -0.43
TTC39A-207ENST00000411642 OGFOD1Q8N543 542 aa12.36□□□□□ -0.43
TTC39A-207ENST00000411642 TRPM4Q8TD43 1214 aa12.36□□□□□ -0.43
TTC39A-207ENST00000411642 TBC1D22AQ8WUA7 517 aa12.36□□□□□ -0.43
TTC39A-207ENST00000411642 DENND2AQ9ULE3 1009 aa12.36□□□□□ -0.43
TTC39A-207ENST00000411642 TRPM7Q96QT4 1865 aa12.36□□□□□ -0.43
TTC39A-207ENST00000411642 MAST2Q6P0Q8 1798 aa12.35□□□□□ -0.43
TTC39A-207ENST00000411642 MYH7P12883 1935 aa12.35□□□□□ -0.43
TTC39A-207ENST00000411642 DOCK2Q92608 1830 aa12.35□□□□□ -0.43
TTC39A-207ENST00000411642 SMARCA5O60264 1052 aaPredicted RBP12.35□□□□□ -0.43
TTC39A-207ENST00000411642 EGFRP00533 1210 aa12.35□□□□□ -0.43
TTC39A-207ENST00000411642 ARID4AP29374 1257 aaPredicted RBP12.35□□□□□ -0.43
TTC39A-207ENST00000411642 ZNF280AP59817 542 aaPredicted RBP12.35□□□□□ -0.43
TTC39A-207ENST00000411642 KIF4BQ2VIQ3 1234 aa12.35□□□□□ -0.43
TTC39A-207ENST00000411642 CCDC158Q5M9N0 1113 aa12.35□□□□□ -0.43
TTC39A-207ENST00000411642 TTC39AQ5SRH9 613 aa12.35□□□□□ -0.43
TTC39A-207ENST00000411642 RBM26Q5T8P6 1007 aaKnown RBP12.35□□□□□ -0.43
TTC39A-207ENST00000411642 LDHDQ86WU2 507 aa12.35□□□□□ -0.43
TTC39A-207ENST00000411642 RBM46Q8TBY0 533 aaKnown RBP12.35□□□□□ -0.43
TTC39A-207ENST00000411642 WDR66Q8TBY9 1149 aa12.35□□□□□ -0.43
TTC39A-207ENST00000411642 HDAC9Q9UKV0 1011 aa12.35□□□□□ -0.43
TTC39A-207ENST00000411642 ZBTB22O15209 634 aa12.34□□□□□ -0.43
TTC39A-207ENST00000411642 IFIT2P09913 472 aaKnown RBP12.34□□□□□ -0.43
TTC39A-207ENST00000411642 UQCRFS1P1P0C7P4 283 aa12.34□□□□□ -0.43
TTC39A-207ENST00000411642 MCAMP43121 646 aa12.34□□□□□ -0.43
TTC39A-207ENST00000411642 RWDD1Q9H446 243 aaPredicted RBP12.34□□□□□ -0.43
TTC39A-207ENST00000411642 MYOZ2Q9NPC6 264 aa12.34□□□□□ -0.43
TTC39A-207ENST00000411642 HMG20BQ9P0W2 317 aa12.34□□□□□ -0.43
TTC39A-207ENST00000411642 TTF2Q9UNY4 1162 aaKnown RBP12.34□□□□□ -0.43
TTC39A-207ENST00000411642 CLEC11AQ9Y240 323 aa12.34□□□□□ -0.43
TTC39A-207ENST00000411642 PDS5AQ29RF7 1337 aaKnown RBP12.34□□□□□ -0.43
TTC39A-207ENST00000411642 MMP14P50281 582 aa12.33□□□□□ -0.44
TTC39A-207ENST00000411642 HIRAP54198 1017 aaPredicted RBP12.33□□□□□ -0.44
TTC39A-207ENST00000411642 SCARF1Q14162 830 aa12.33□□□□□ -0.44
TTC39A-207ENST00000411642 GRIK5Q16478 980 aa12.33□□□□□ -0.44
TTC39A-207ENST00000411642 CHADLQ6NUI6 762 aa12.33□□□□□ -0.44
TTC39A-207ENST00000411642 PI16Q6UXB8 463 aa12.33□□□□□ -0.44
TTC39A-207ENST00000411642 SPATA5Q8NB90 893 aa12.33□□□□□ -0.44
TTC39A-207ENST00000411642 SMC1BQ8NDV3 1235 aa12.33□□□□□ -0.44
TTC39A-207ENST00000411642 GCC1Q96CN9 775 aa12.33□□□□□ -0.44
TTC39A-207ENST00000411642 SALL1Q9NSC2 1324 aa12.33□□□□□ -0.44
TTC39A-207ENST00000411642 PRDX5P30044 214 aa12.32□□□□□ -0.44
TTC39A-207ENST00000411642 ZNF512BQ96KM6 892 aaPredicted RBP12.32□□□□□ -0.44
TTC39A-207ENST00000411642 SNRKQ9NRH2 765 aa12.32□□□□□ -0.44
TTC39A-207ENST00000411642 SUGT1Q9Y2Z0 365 aa12.32□□□□□ -0.44
TTC39A-207ENST00000411642 MAST3O60307 1309 aa12.32□□□□□ -0.44
TTC39A-207ENST00000411642 IGHDP01880 384 aa12.31□□□□□ -0.44
TTC39A-207ENST00000411642 LDHBP07195 334 aaKnown RBP12.31□□□□□ -0.44
TTC39A-207ENST00000411642 RBM5P52756 815 aaKnown RBP eCLIP12.31□□□□□ -0.44
TTC39A-207ENST00000411642 FSTL1Q12841 308 aa12.31□□□□□ -0.44
TTC39A-207ENST00000411642 DLGAP5Q15398 846 aa12.31□□□□□ -0.44
TTC39A-207ENST00000411642 CFAP100Q494V2 611 aa12.31□□□□□ -0.44
TTC39A-207ENST00000411642 MAP1SQ66K74 1059 aaPredicted RBP12.31□□□□□ -0.44
TTC39A-207ENST00000411642 ZGPATQ8N5A5 531 aaKnown RBP12.31□□□□□ -0.44
TTC39A-207ENST00000411642 ZC3H15Q8WU90 426 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms