RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 PUM3Q15397 648 aaKnown RBP23.03■■□□□ 1.28
LMO2-203ENST00000411482 LPIN2Q92539 896 aa23.03■■□□□ 1.28
LMO2-203ENST00000411482 ARAP2Q8WZ64 1704 aa23.02■■□□□ 1.28
LMO2-203ENST00000411482 ARID4AP29374 1257 aaPredicted RBP23.02■■□□□ 1.28
LMO2-203ENST00000411482 SCARF1Q14162 830 aa23.02■■□□□ 1.28
LMO2-203ENST00000411482 SF3B3Q15393 1217 aaKnown RBP23.02■■□□□ 1.28
LMO2-203ENST00000411482 UTRNP46939 3433 aa23.01■■□□□ 1.27
LMO2-203ENST00000411482 NPHP1O15259 732 aa23.01■■□□□ 1.27
LMO2-203ENST00000411482 CPA1P15085 419 aa23.01■■□□□ 1.27
LMO2-203ENST00000411482 RPS6KB1P23443 525 aa23.01■■□□□ 1.27
LMO2-203ENST00000411482 GTF2E1P29083 439 aaPredicted RBP23.01■■□□□ 1.27
LMO2-203ENST00000411482 PDE6BP35913 854 aa23.01■■□□□ 1.27
LMO2-203ENST00000411482 ANKRD1Q15327 319 aa23.01■■□□□ 1.27
LMO2-203ENST00000411482 CCDC129Q6ZRS4 1044 aa23.01■■□□□ 1.27
LMO2-203ENST00000411482 C3orf67Q6ZVT6 689 aa23.01■■□□□ 1.27
LMO2-203ENST00000411482 MAST3O60307 1309 aa23■■□□□ 1.27
LMO2-203ENST00000411482 UQCRFS1P1P0C7P4 283 aa23■■□□□ 1.27
LMO2-203ENST00000411482 SRGNP10124 158 aa23■■□□□ 1.27
LMO2-203ENST00000411482 BLOC1S2Q6QNY1 142 aa23■■□□□ 1.27
LMO2-203ENST00000411482 C2CD5Q86YS7 1000 aa23■■□□□ 1.27
LMO2-203ENST00000411482 TAF6LQ9Y6J9 622 aa23■■□□□ 1.27
LMO2-203ENST00000411482 GOLGA6L22H0YM25 854 aa22.99■■□□□ 1.27
LMO2-203ENST00000411482 MCAMP43121 646 aa22.99■■□□□ 1.27
LMO2-203ENST00000411482 ZAP70P43403 619 aa22.99■■□□□ 1.27
LMO2-203ENST00000411482 FKBP4Q02790 459 aaKnown RBP eCLIP22.99■■□□□ 1.27
LMO2-203ENST00000411482 CRY2Q49AN0 593 aa22.99■■□□□ 1.27
LMO2-203ENST00000411482 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.99■■□□□ 1.27
LMO2-203ENST00000411482 H0YIN7 160 aa22.98■■□□□ 1.27
LMO2-203ENST00000411482 YBX3P16989 372 aaKnown RBP eCLIP22.98■■□□□ 1.276e-9■□□□□ 10.9
LMO2-203ENST00000411482 TTF1Q15361 905 aaPredicted RBP22.98■■□□□ 1.27
LMO2-203ENST00000411482 NOL8Q76FK4 1167 aaKnown RBP22.98■■□□□ 1.27
LMO2-203ENST00000411482 SEC31BQ9NQW1 1179 aa22.98■■□□□ 1.27
LMO2-203ENST00000411482 WWC3Q9ULE0 1092 aa22.98■■□□□ 1.27
LMO2-203ENST00000411482 CYP21A2P08686 494 aa22.98■■□□□ 1.27
LMO2-203ENST00000411482 CCDC102BQ68D86 513 aa22.98■■□□□ 1.27
LMO2-203ENST00000411482 OSBP2Q969R2 916 aa22.98■■□□□ 1.27
LMO2-203ENST00000411482 HSPD1P10809 573 aaKnown RBP22.97■■□□□ 1.27
LMO2-203ENST00000411482 APPBP2Q92624 585 aa22.97■■□□□ 1.27
LMO2-203ENST00000411482 MPHOSPH8Q99549 860 aa22.97■■□□□ 1.27
LMO2-203ENST00000411482 PIM2Q9P1W9 311 aa22.97■■□□□ 1.27
LMO2-203ENST00000411482 SLC5A1P13866 664 aa22.96■■□□□ 1.27
LMO2-203ENST00000411482 IGHMBP2P38935 993 aaKnown RBP22.96■■□□□ 1.27
LMO2-203ENST00000411482 ZSCAN25Q6NSZ9 544 aa22.96■■□□□ 1.27
LMO2-203ENST00000411482 SLX4Q8IY92 1834 aa22.96■■□□□ 1.27
LMO2-203ENST00000411482 M0R2C6 588 aa22.95■■□□□ 1.26
LMO2-203ENST00000411482 LARGE1O95461 756 aa22.95■■□□□ 1.26
LMO2-203ENST00000411482 HMGB1P09429 215 aaKnown RBP22.95■■□□□ 1.26
LMO2-203ENST00000411482 COL9A3Q14050 684 aaPredicted RBP22.95■■□□□ 1.26
LMO2-203ENST00000411482 TOB2Q14106 344 aaPredicted RBP22.95■■□□□ 1.26
LMO2-203ENST00000411482 SLFNL1Q499Z3 407 aa22.95■■□□□ 1.26
LMO2-203ENST00000411482 NEK1Q96PY6 1258 aa22.95■■□□□ 1.26
LMO2-203ENST00000411482 CDC5LQ99459 802 aaKnown RBP22.95■■□□□ 1.26
LMO2-203ENST00000411482 ARFGEF1Q9Y6D6 1849 aa22.94■■□□□ 1.26
LMO2-203ENST00000411482 MYH7P12883 1935 aa22.94■■□□□ 1.26
LMO2-203ENST00000411482 PDIA4P13667 645 aaKnown RBP22.94■■□□□ 1.26
LMO2-203ENST00000411482 PHKA1P46020 1223 aa22.94■■□□□ 1.26
LMO2-203ENST00000411482 UBE3CQ15386 1083 aa22.94■■□□□ 1.26
LMO2-203ENST00000411482 ME3Q16798 604 aa22.94■■□□□ 1.26
LMO2-203ENST00000411482 MASTLQ96GX5 879 aa22.94■■□□□ 1.26
LMO2-203ENST00000411482 NLRP3Q96P20 1036 aa22.94■■□□□ 1.26
LMO2-203ENST00000411482 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.94■■□□□ 1.26
LMO2-203ENST00000411482 TPCN1Q9ULQ1 816 aa22.94■■□□□ 1.26
LMO2-203ENST00000411482 TAF1P21675 1872 aa22.94■■□□□ 1.26
LMO2-203ENST00000411482 WDR33Q9C0J8 1336 aaKnown RBP22.94■■□□□ 1.26
LMO2-203ENST00000411482 CACNA1SQ13698 1873 aa22.93■■□□□ 1.26
LMO2-203ENST00000411482 HOXA10P31260 410 aaPredicted RBP22.93■■□□□ 1.26
LMO2-203ENST00000411482 ST3GAL1Q11201 340 aa22.93■■□□□ 1.26
LMO2-203ENST00000411482 STYK1Q6J9G0 422 aa22.93■■□□□ 1.26
LMO2-203ENST00000411482 FOXP2O15409 715 aa22.92■■□□□ 1.26
LMO2-203ENST00000411482 NPR1P16066 1061 aa22.92■■□□□ 1.26
LMO2-203ENST00000411482 ADD2P35612 726 aa22.92■■□□□ 1.26
LMO2-203ENST00000411482 PI16Q6UXB8 463 aa22.92■■□□□ 1.26
LMO2-203ENST00000411482 ZNF622Q969S3 477 aaKnown RBP eCLIP22.92■■□□□ 1.26
LMO2-203ENST00000411482 LMBRD1Q9NUN5 540 aa22.92■■□□□ 1.26
LMO2-203ENST00000411482 GPR162Q16538 588 aa22.92■■□□□ 1.26
LMO2-203ENST00000411482 KLHL40Q2TBA0 621 aa22.92■■□□□ 1.26
LMO2-203ENST00000411482 STOX1Q6ZVD7 989 aa22.92■■□□□ 1.26
LMO2-203ENST00000411482 TTLL6Q8N841 843 aa22.92■■□□□ 1.26
LMO2-203ENST00000411482 HELBQ8NG08 1087 aaPredicted RBP22.92■■□□□ 1.26
LMO2-203ENST00000411482 CTNNA3Q9UI47 895 aa22.92■■□□□ 1.26
LMO2-203ENST00000411482 EXOSC10Q01780 885 aaKnown RBP22.91■■□□□ 1.26
LMO2-203ENST00000411482 DALRD3Q5D0E6 543 aaKnown RBP22.91■■□□□ 1.26
LMO2-203ENST00000411482 FBXL16Q8N461 479 aa22.91■■□□□ 1.26
LMO2-203ENST00000411482 AGXT2Q9BYV1 514 aa22.91■■□□□ 1.26
LMO2-203ENST00000411482 PIH1D3Q9NQM4 214 aaKnown RBP22.91■■□□□ 1.26
LMO2-203ENST00000411482 BSDC1Q9NW68 430 aaPredicted RBP22.91■■□□□ 1.26
LMO2-203ENST00000411482 SMC3Q9UQE7 1217 aa22.91■■□□□ 1.26
LMO2-203ENST00000411482 BCS1LQ9Y276 419 aa22.91■■□□□ 1.26
LMO2-203ENST00000411482 FSD2A1L4K1 749 aa22.89■■□□□ 1.26
LMO2-203ENST00000411482 CHRNDQ07001 517 aa22.89■■□□□ 1.26
LMO2-203ENST00000411482 MCTP1Q6DN14 999 aa22.89■■□□□ 1.26
LMO2-203ENST00000411482 DHX32Q7L7V1 743 aaKnown RBP22.89■■□□□ 1.26
LMO2-203ENST00000411482 CNKSR1Q969H4 720 aa22.89■■□□□ 1.26
LMO2-203ENST00000411482 LARP6Q9BRS8 491 aaKnown RBP22.89■■□□□ 1.26
LMO2-203ENST00000411482 PUS7LQ9H0K6 701 aaKnown RBP22.89■■□□□ 1.26
LMO2-203ENST00000411482 TCRBV5S4A2TA0A5A2 114 aa22.88■■□□□ 1.25
LMO2-203ENST00000411482 WASHC4Q2M389 1173 aa22.88■■□□□ 1.25
LMO2-203ENST00000411482 ANKRD18AQ8IVF6 992 aa22.88■■□□□ 1.25
LMO2-203ENST00000411482 CCDC83Q8IWF9 413 aa22.88■■□□□ 1.25
LMO2-203ENST00000411482 SPATA5Q8NB90 893 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms