RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 IL2RBP14784 551 aa9.52□□□□□ -0.89
SCN9A-203ENST00000409672 IRX3P78415 501 aaPredicted RBP9.52□□□□□ -0.89
SCN9A-203ENST00000409672 KIF22Q14807 665 aa9.52□□□□□ -0.89
SCN9A-203ENST00000409672 LETM2Q2VYF4 491 aa9.52□□□□□ -0.89
SCN9A-203ENST00000409672 DPP8Q6V1X1 898 aaPredicted RBP9.52□□□□□ -0.89
SCN9A-203ENST00000409672 GSDMBQ8TAX9 411 aa9.52□□□□□ -0.89
SCN9A-203ENST00000409672 FBF1Q8TES7 1133 aa9.52□□□□□ -0.89
SCN9A-203ENST00000409672 DNAJC21Q5F1R6 531 aaKnown RBP9.52□□□□□ -0.89
SCN9A-203ENST00000409672 RPAP2Q8IXW5 612 aaPredicted RBP9.52□□□□□ -0.89
SCN9A-203ENST00000409672 ZNF830Q96NB3 372 aaPredicted RBP9.52□□□□□ -0.89
SCN9A-203ENST00000409672 MAPK8IP1Q9UQF2 711 aa9.52□□□□□ -0.89
SCN9A-203ENST00000409672 DTNBO60941 627 aa9.52□□□□□ -0.89
SCN9A-203ENST00000409672 IDI1Q13907 227 aa9.52□□□□□ -0.89
SCN9A-203ENST00000409672 BRDTQ58F21 947 aaPredicted RBP9.52□□□□□ -0.89
SCN9A-203ENST00000409672 NBPF7P0C2Y1 421 aaPredicted RBP9.52□□□□□ -0.89
SCN9A-203ENST00000409672 DOK7Q18PE1 504 aa9.52□□□□□ -0.89
SCN9A-203ENST00000409672 GIMAP6Q6P9H5 292 aa9.52□□□□□ -0.89
SCN9A-203ENST00000409672 GOLGA1Q92805 767 aa9.52□□□□□ -0.89
SCN9A-203ENST00000409672 NAA15Q9BXJ9 866 aaKnown RBP9.52□□□□□ -0.89
SCN9A-203ENST00000409672 USTQ9Y2C2 406 aa9.52□□□□□ -0.89
SCN9A-203ENST00000409672 CWF19L2Q2TBE0 894 aaKnown RBP9.52□□□□□ -0.89
SCN9A-203ENST00000409672 CCDC183Q5T5S1 534 aa9.52□□□□□ -0.89
SCN9A-203ENST00000409672 SPATA24Q86W54 205 aa9.52□□□□□ -0.89
SCN9A-203ENST00000409672 APOL6Q9BWW8 343 aa9.51□□□□□ -0.89
SCN9A-203ENST00000409672 KRT23Q9C075 422 aa9.51□□□□□ -0.89
SCN9A-203ENST00000409672 KIF9Q9HAQ2 790 aa9.51□□□□□ -0.89
SCN9A-203ENST00000409672 TCP10L2B9ZVM9 353 aa9.51□□□□□ -0.89
SCN9A-203ENST00000409672 SSFA2P28290 1259 aa9.51□□□□□ -0.89
SCN9A-203ENST00000409672 PSMD6Q15008 389 aa9.51□□□□□ -0.89
SCN9A-203ENST00000409672 H7C1D1 291 aa9.51□□□□□ -0.89
SCN9A-203ENST00000409672 FAM89AQ96GI7 184 aa9.51□□□□□ -0.89
SCN9A-203ENST00000409672 PPP1R9BQ96SB3 815 aa9.51□□□□□ -0.89
SCN9A-203ENST00000409672 ABCF3Q9NUQ8 709 aa9.51□□□□□ -0.89
SCN9A-203ENST00000409672 LRRC9Q6ZRR7 1453 aa9.51□□□□□ -0.89
SCN9A-203ENST00000409672 TRPC3Q13507 836 aa9.51□□□□□ -0.89
SCN9A-203ENST00000409672 DPY19L2Q6NUT2 758 aa9.51□□□□□ -0.89
SCN9A-203ENST00000409672 SKA2Q8WVK7 121 aaPredicted RBP9.51□□□□□ -0.89
SCN9A-203ENST00000409672 PPIP5K2O43314 1243 aa9.51□□□□□ -0.89
SCN9A-203ENST00000409672 KCNK9Q9NPC2 374 aa9.51□□□□□ -0.89
SCN9A-203ENST00000409672 UQCRFS1P1P0C7P4 283 aa9.51□□□□□ -0.89
SCN9A-203ENST00000409672 BSPRYQ5W0U4 402 aa9.51□□□□□ -0.89
SCN9A-203ENST00000409672 BRF1Q92994 677 aa9.51□□□□□ -0.89
SCN9A-203ENST00000409672 EYA3Q99504 573 aa9.51□□□□□ -0.89
SCN9A-203ENST00000409672 LIMCH1Q9UPQ0 1083 aa9.51□□□□□ -0.89
SCN9A-203ENST00000409672 GPATCH11Q8N954 259 aa9.51□□□□□ -0.89
SCN9A-203ENST00000409672 SUDS3Q9H7L9 328 aaPredicted RBP9.51□□□□□ -0.89
SCN9A-203ENST00000409672 UBASH3AP57075 661 aa9.5□□□□□ -0.89
SCN9A-203ENST00000409672 CFAP157Q5JU67 520 aa9.5□□□□□ -0.89
SCN9A-203ENST00000409672 USP37Q86T82 979 aa9.5□□□□□ -0.89
SCN9A-203ENST00000409672 NIM1KQ8IY84 436 aa9.5□□□□□ -0.89
SCN9A-203ENST00000409672 ITKQ08881 620 aa9.5□□□□□ -0.89
SCN9A-203ENST00000409672 PPP1R7Q15435 360 aa9.5□□□□□ -0.89
SCN9A-203ENST00000409672 TTC12Q9H892 705 aaPredicted RBP9.5□□□□□ -0.89
SCN9A-203ENST00000409672 TBC1D10BQ4KMP7 808 aaPredicted RBP9.5□□□□□ -0.89
SCN9A-203ENST00000409672 PRKAG2Q9UGJ0 569 aa9.5□□□□□ -0.89
SCN9A-203ENST00000409672 ATF5Q9Y2D1 282 aaPredicted RBP9.5□□□□□ -0.89
SCN9A-203ENST00000409672 SYNJ2BP-COX16A0A087WUM0 186 aa9.5□□□□□ -0.89
SCN9A-203ENST00000409672 CCDC155Q8N6L0 562 aa9.5□□□□□ -0.89
SCN9A-203ENST00000409672 SMARCC1Q92922 1105 aaPredicted RBP9.5□□□□□ -0.89
SCN9A-203ENST00000409672 NBPF3Q9H094 633 aa9.5□□□□□ -0.89
SCN9A-203ENST00000409672 COX16Q9P0S2 106 aa9.5□□□□□ -0.89
SCN9A-203ENST00000409672 CC2D2AQ9P2K1 1620 aa9.5□□□□□ -0.89
SCN9A-203ENST00000409672 FANCIQ9NVI1 1328 aa9.5□□□□□ -0.89
SCN9A-203ENST00000409672 CASC4Q6P4E1 433 aa9.5□□□□□ -0.89
SCN9A-203ENST00000409672 NCAPH2Q6IBW4 605 aa9.5□□□□□ -0.89
SCN9A-203ENST00000409672 PARP1P09874 1014 aaKnown RBP9.5□□□□□ -0.89
SCN9A-203ENST00000409672 KRT2P35908 639 aa9.5□□□□□ -0.89
SCN9A-203ENST00000409672 STRN3Q13033 797 aa9.5□□□□□ -0.89
SCN9A-203ENST00000409672 NSMFQ6X4W1 530 aa9.5□□□□□ -0.89
SCN9A-203ENST00000409672 KIF18AQ8NI77 898 aa9.5□□□□□ -0.89
SCN9A-203ENST00000409672 IFT81Q8WYA0 676 aa9.5□□□□□ -0.89
SCN9A-203ENST00000409672 IGF1RP08069 1367 aa9.5□□□□□ -0.89
SCN9A-203ENST00000409672 HSF2BPO75031 334 aa9.5□□□□□ -0.89
SCN9A-203ENST00000409672 SLC8A3P57103 927 aa9.5□□□□□ -0.89
SCN9A-203ENST00000409672 UTP14CQ5TAP6 766 aaKnown RBP9.5□□□□□ -0.89
SCN9A-203ENST00000409672 ATP6V0A2Q9Y487 856 aa9.5□□□□□ -0.89
SCN9A-203ENST00000409672 BZW2Q9Y6E2 419 aaKnown RBP9.5□□□□□ -0.89
SCN9A-203ENST00000409672 ZNF174Q15697 407 aa9.49□□□□□ -0.89
SCN9A-203ENST00000409672 RDH13Q8NBN7 331 aa9.49□□□□□ -0.89
SCN9A-203ENST00000409672 ARHGEF10LQ9HCE6 1279 aa9.49□□□□□ -0.89
SCN9A-203ENST00000409672 ECHDC1Q9NTX5 307 aa9.49□□□□□ -0.89
SCN9A-203ENST00000409672 ADGRF5Q8IZF2 1346 aa9.49□□□□□ -0.89
SCN9A-203ENST00000409672 KIF4AO95239 1232 aa9.49□□□□□ -0.89
SCN9A-203ENST00000409672 NCAPG2Q86XI2 1143 aa9.49□□□□□ -0.89
SCN9A-203ENST00000409672 PRPF31Q8WWY3 499 aaKnown RBP9.49□□□□□ -0.89
SCN9A-203ENST00000409672 ZNF594Q96JF6 807 aaPredicted RBP9.49□□□□□ -0.89
SCN9A-203ENST00000409672 APOBRQ0VD83 1088 aa9.49□□□□□ -0.89
SCN9A-203ENST00000409672 CCDC102BQ68D86 513 aa9.49□□□□□ -0.89
SCN9A-203ENST00000409672 PRPF38AQ8NAV1 312 aaKnown RBP9.49□□□□□ -0.89
SCN9A-203ENST00000409672 SLC4A1P02730 911 aa9.49□□□□□ -0.89
SCN9A-203ENST00000409672 PPP1R16BQ96T49 567 aa9.49□□□□□ -0.89
SCN9A-203ENST00000409672 FAM193BQ96PV7 902 aaPredicted RBP9.49□□□□□ -0.89
SCN9A-203ENST00000409672 PAG1Q9NWQ8 432 aa9.49□□□□□ -0.89
SCN9A-203ENST00000409672 CGNQ9P2M7 1197 aaKnown RBP9.49□□□□□ -0.89
SCN9A-203ENST00000409672 MAGED2Q9UNF1 606 aaPredicted RBP9.49□□□□□ -0.89
SCN9A-203ENST00000409672 CSADQ9Y600 493 aa9.49□□□□□ -0.89
SCN9A-203ENST00000409672 hCG_1642624A0A1W2PR95 340 aa9.49□□□□□ -0.89
SCN9A-203ENST00000409672 TLDC2A0PJX2 215 aa9.49□□□□□ -0.89
SCN9A-203ENST00000409672 CCDC172P0C7W6 258 aa9.49□□□□□ -0.89
SCN9A-203ENST00000409672 FRMD4BQ9Y2L6 1034 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms