RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 IQSEC3Q9UPP2 1182 aaPredicted RBP20.33■□□□□ 0.85
SUMO1-208ENST00000409627 ZNF541Q9H0D2 1346 aa20.32■□□□□ 0.84
SUMO1-208ENST00000409627 USP17L3A6NCW0 530 aa20.32■□□□□ 0.84
SUMO1-208ENST00000409627 USP17L4A6NCW7 530 aa20.32■□□□□ 0.84
SUMO1-208ENST00000409627 CXCL9Q07325 125 aa20.32■□□□□ 0.84
SUMO1-208ENST00000409627 STRIP1Q5VSL9 837 aa20.32■□□□□ 0.84
SUMO1-208ENST00000409627 CIAPIN1Q6FI81 312 aa20.32■□□□□ 0.84
SUMO1-208ENST00000409627 USP17L1Q7RTZ2 530 aa20.32■□□□□ 0.84
SUMO1-208ENST00000409627 KCNQ5Q9NR82 932 aa20.32■□□□□ 0.84
SUMO1-208ENST00000409627 RAD17O75943 681 aa20.31■□□□□ 0.84
SUMO1-208ENST00000409627 ATP5JP18859 108 aa20.31■□□□□ 0.84
SUMO1-208ENST00000409627 MCAMP43121 646 aa20.31■□□□□ 0.84
SUMO1-208ENST00000409627 GTF2IP78347 998 aa20.31■□□□□ 0.84
SUMO1-208ENST00000409627 TNIP1Q15025 636 aa20.31■□□□□ 0.84
SUMO1-208ENST00000409627 TTLL5Q6EMB2 1281 aa20.31■□□□□ 0.84
SUMO1-208ENST00000409627 STAP2Q9UGK3 403 aa20.31■□□□□ 0.84
SUMO1-208ENST00000409627 GTF3C3Q9Y5Q9 886 aa20.31■□□□□ 0.84
SUMO1-208ENST00000409627 PSMD14O00487 310 aa20.3■□□□□ 0.84
SUMO1-208ENST00000409627 VIL1P09327 827 aaKnown RBP20.3■□□□□ 0.84
SUMO1-208ENST00000409627 PDE4AP27815 886 aa20.3■□□□□ 0.84
SUMO1-208ENST00000409627 FKBP1AP62942 108 aaKnown RBP20.3■□□□□ 0.84
SUMO1-208ENST00000409627 SCARF1Q14162 830 aa20.3■□□□□ 0.84
SUMO1-208ENST00000409627 DACT2Q5SW24 774 aa20.3■□□□□ 0.84
SUMO1-208ENST00000409627 SPATA5Q8NB90 893 aa20.3■□□□□ 0.84
SUMO1-208ENST00000409627 HMG20BQ9P0W2 317 aa20.3■□□□□ 0.84
SUMO1-208ENST00000409627 DOCK2Q92608 1830 aa20.3■□□□□ 0.84
SUMO1-208ENST00000409627 AOX1Q06278 1338 aa20.29■□□□□ 0.84
SUMO1-208ENST00000409627 PDE1AP54750 535 aa20.29■□□□□ 0.84
SUMO1-208ENST00000409627 CHAF1AQ13111 956 aaPredicted RBP20.29■□□□□ 0.84
SUMO1-208ENST00000409627 PLEKHM2Q8IWE5 1019 aa20.29■□□□□ 0.84
SUMO1-208ENST00000409627 WDR66Q8TBY9 1149 aa20.29■□□□□ 0.84
SUMO1-208ENST00000409627 TBC1D22AQ8WUA7 517 aa20.29■□□□□ 0.84
SUMO1-208ENST00000409627 FBXW7Q969H0 707 aa20.29■□□□□ 0.84
SUMO1-208ENST00000409627 UTRNP46939 3433 aa20.28■□□□□ 0.84
SUMO1-208ENST00000409627 MYO3BQ8WXR4 1341 aa20.28■□□□□ 0.84
SUMO1-208ENST00000409627 SALL1Q9NSC2 1324 aa20.28■□□□□ 0.84
SUMO1-208ENST00000409627 ERC2O15083 957 aa20.28■□□□□ 0.84
SUMO1-208ENST00000409627 GPC2Q8N158 579 aa20.28■□□□□ 0.84
SUMO1-208ENST00000409627 PI4K2BQ8TCG2 481 aa20.28■□□□□ 0.84
SUMO1-208ENST00000409627 OSBPL3Q9H4L5 887 aa20.28■□□□□ 0.84
SUMO1-208ENST00000409627 MYO5AQ9Y4I1 1855 aaKnown RBP20.27■□□□□ 0.84
SUMO1-208ENST00000409627 MAST2Q6P0Q8 1798 aa20.27■□□□□ 0.84
SUMO1-208ENST00000409627 GLRX3O76003 335 aaKnown RBP20.27■□□□□ 0.84
SUMO1-208ENST00000409627 TSHZ3Q63HK5 1081 aa20.27■□□□□ 0.84
SUMO1-208ENST00000409627 DPY19L2Q6NUT2 758 aa20.27■□□□□ 0.84
SUMO1-208ENST00000409627 RSBN1LQ6PCB5 846 aaPredicted RBP20.27■□□□□ 0.84
SUMO1-208ENST00000409627 PI16Q6UXB8 463 aa20.27■□□□□ 0.84
SUMO1-208ENST00000409627 JAG2Q9Y219 1238 aa20.27■□□□□ 0.84
SUMO1-208ENST00000409627 WDR90Q96KV7 1748 aa20.27■□□□□ 0.83
SUMO1-208ENST00000409627 GLTPD2A6NH11 291 aa20.26■□□□□ 0.83
SUMO1-208ENST00000409627 RPS12P25398 132 aaKnown RBP20.26■□□□□ 0.83
SUMO1-208ENST00000409627 ZAP70P43403 619 aa20.26■□□□□ 0.83
SUMO1-208ENST00000409627 MFSD14BQ5SR56 506 aa20.26■□□□□ 0.83
SUMO1-208ENST00000409627 ZGPATQ8N5A5 531 aaKnown RBP20.26■□□□□ 0.83
SUMO1-208ENST00000409627 AGBL3Q8NEM8 1001 aa20.26■□□□□ 0.83
SUMO1-208ENST00000409627 HAUS7Q99871 368 aa20.26■□□□□ 0.83
SUMO1-208ENST00000409627 BOLA2Q9H3K6 86 aa20.26■□□□□ 0.83
SUMO1-208ENST00000409627 GJA3Q9Y6H8 435 aa20.26■□□□□ 0.83
SUMO1-208ENST00000409627 CERS5Q8N5B7 392 aa20.25■□□□□ 0.83
SUMO1-208ENST00000409627 SNRKQ9NRH2 765 aa20.25■□□□□ 0.83
SUMO1-208ENST00000409627 MYH7P12883 1935 aa20.24■□□□□ 0.83
SUMO1-208ENST00000409627 DDNO94850 711 aaPredicted RBP20.24■□□□□ 0.83
SUMO1-208ENST00000409627 CYP2E1P05181 493 aaPredicted RBP20.24■□□□□ 0.83
SUMO1-208ENST00000409627 GMLQ99445 158 aa20.24■□□□□ 0.83
SUMO1-208ENST00000409627 MXD3Q9BW11 206 aa20.24■□□□□ 0.83
SUMO1-208ENST00000409627 SUGT1Q9Y2Z0 365 aa20.24■□□□□ 0.83
SUMO1-208ENST00000409627 SCN4AP35499 1836 aa20.24■□□□□ 0.83
SUMO1-208ENST00000409627 AK9Q5TCS8 1911 aa20.23■□□□□ 0.83
SUMO1-208ENST00000409627 TTF1Q15361 905 aaPredicted RBP20.23■□□□□ 0.83
SUMO1-208ENST00000409627 DPF2Q92785 391 aa20.23■□□□□ 0.83
SUMO1-208ENST00000409627 L3MBTL3Q96JM7 780 aaPredicted RBP20.23■□□□□ 0.83
SUMO1-208ENST00000409627 DNAJC2Q99543 621 aaKnown RBP20.23■□□□□ 0.83
SUMO1-208ENST00000409627 ZBTB12Q9Y330 459 aaPredicted RBP20.23■□□□□ 0.83
SUMO1-208ENST00000409627 NDUFB9Q9Y6M9 179 aa20.23■□□□□ 0.83
SUMO1-208ENST00000409627 IGSF3O75054 1194 aa20.22■□□□□ 0.83
SUMO1-208ENST00000409627 GMPSP49915 693 aaPredicted RBP20.22■□□□□ 0.83
SUMO1-208ENST00000409627 SPTY2D1Q68D10 685 aaPredicted RBP20.22■□□□□ 0.83
SUMO1-208ENST00000409627 PAG1Q9NWQ8 432 aa20.22■□□□□ 0.83
SUMO1-208ENST00000409627 GOLIM4O00461 696 aa20.21■□□□□ 0.83
SUMO1-208ENST00000409627 MMP14P50281 582 aa20.21■□□□□ 0.83
SUMO1-208ENST00000409627 TBC1D9Q6ZT07 1266 aa20.21■□□□□ 0.83
SUMO1-208ENST00000409627 ANTXR1Q9H6X2 564 aa20.21■□□□□ 0.83
SUMO1-208ENST00000409627 ABCF2Q9UG63 623 aa20.21■□□□□ 0.83
SUMO1-208ENST00000409627 LDHBP07195 334 aaKnown RBP20.2■□□□□ 0.82
SUMO1-208ENST00000409627 PRDX5P30044 214 aa20.2■□□□□ 0.82
SUMO1-208ENST00000409627 SCNN1DP51172 638 aa20.2■□□□□ 0.82
SUMO1-208ENST00000409627 GRIK5Q16478 980 aa20.2■□□□□ 0.82
SUMO1-208ENST00000409627 ERICH6Q7L0X2 663 aa20.2■□□□□ 0.82
SUMO1-208ENST00000409627 PIH1D3Q9NQM4 214 aaKnown RBP20.2■□□□□ 0.82
SUMO1-208ENST00000409627 MAST3O60307 1309 aa20.2■□□□□ 0.82
SUMO1-208ENST00000409627 MYH2Q9UKX2 1941 aa20.19■□□□□ 0.82
SUMO1-208ENST00000409627 ADAMTSL1Q8N6G6 1762 aa20.19■□□□□ 0.82
SUMO1-208ENST00000409627 USP17L8P0C7I0 530 aa20.19■□□□□ 0.82
SUMO1-208ENST00000409627 TTC22Q5TAA0 569 aa20.19■□□□□ 0.82
SUMO1-208ENST00000409627 SKAP1Q86WV1 359 aa20.19■□□□□ 0.82
SUMO1-208ENST00000409627 KIAA0825Q8IV33 1275 aa20.19■□□□□ 0.82
SUMO1-208ENST00000409627 EDC3Q96F86 508 aaKnown RBP20.19■□□□□ 0.82
SUMO1-208ENST00000409627 GPRC5DQ9NZD1 345 aa20.19■□□□□ 0.82
SUMO1-208ENST00000409627 LRP2BPQ9P2M1 347 aa20.19■□□□□ 0.82
SUMO1-208ENST00000409627 ZNF280AP59817 542 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms