RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 GTF2IP78347 998 aa18.24■□□□□ 0.51
NIF3L1-205ENST00000409588 ANGEL2Q5VTE6 544 aaKnown RBP18.24■□□□□ 0.51
NIF3L1-205ENST00000409588 DIEXFQ68CQ4 756 aaKnown RBP18.24■□□□□ 0.51
NIF3L1-205ENST00000409588 HELBQ8NG08 1087 aaPredicted RBP18.24■□□□□ 0.51
NIF3L1-205ENST00000409588 FBXW7Q969H0 707 aa18.24■□□□□ 0.51
NIF3L1-205ENST00000409588 CCDC102AQ96A19 550 aa18.24■□□□□ 0.51
NIF3L1-205ENST00000409588 ZNF408Q9H9D4 720 aa18.24■□□□□ 0.51
NIF3L1-205ENST00000409588 GBA2Q9HCG7 927 aaPredicted RBP18.24■□□□□ 0.51
NIF3L1-205ENST00000409588 GGA3Q9NZ52 723 aa18.24■□□□□ 0.51
NIF3L1-205ENST00000409588 CA12O43570 354 aa18.23■□□□□ 0.51
NIF3L1-205ENST00000409588 COL13A1Q5TAT6 717 aaPredicted RBP18.23■□□□□ 0.51
NIF3L1-205ENST00000409588 CYP4F22Q6NT55 531 aa18.23■□□□□ 0.51
NIF3L1-205ENST00000409588 FBXO3Q9UK99 471 aa18.23■□□□□ 0.51
NIF3L1-205ENST00000409588 NOB1Q9ULX3 412 aaKnown RBP18.23■□□□□ 0.51
NIF3L1-205ENST00000409588 SPEF2Q9C093 1822 aa18.22■□□□□ 0.51
NIF3L1-205ENST00000409588 IPO8O15397 1037 aaKnown RBP18.22■□□□□ 0.51
NIF3L1-205ENST00000409588 PLIN1O60240 522 aa18.22■□□□□ 0.51
NIF3L1-205ENST00000409588 HUNKP57058 714 aa18.22■□□□□ 0.51
NIF3L1-205ENST00000409588 NOGQ13253 232 aa18.22■□□□□ 0.51
NIF3L1-205ENST00000409588 MTMR14Q8NCE2 650 aa18.22■□□□□ 0.51
NIF3L1-205ENST00000409588 KIF16BQ96L93 1317 aa18.22■□□□□ 0.51
NIF3L1-205ENST00000409588 WNT10BO00744 389 aa18.21■□□□□ 0.51
NIF3L1-205ENST00000409588 KLRK1P26718 216 aa18.21■□□□□ 0.51
NIF3L1-205ENST00000409588 HIBADHP31937 336 aaKnown RBP18.21■□□□□ 0.51
NIF3L1-205ENST00000409588 RARSP54136 660 aaKnown RBP18.21■□□□□ 0.51
NIF3L1-205ENST00000409588 ANKRD44Q8N8A2 993 aa18.21■□□□□ 0.51
NIF3L1-205ENST00000409588 ADM5C9JUS6 153 aa18.2■□□□□ 0.5
NIF3L1-205ENST00000409588 FOXN1O15353 648 aa18.2■□□□□ 0.5
NIF3L1-205ENST00000409588 PDE8BO95263 885 aa18.2■□□□□ 0.5
NIF3L1-205ENST00000409588 CAVIN4Q5BKX8 364 aa18.2■□□□□ 0.5
NIF3L1-205ENST00000409588 RGMBQ6NW40 437 aa18.2■□□□□ 0.5
NIF3L1-205ENST00000409588 TDRD7Q8NHU6 1098 aaKnown RBP18.2■□□□□ 0.5
NIF3L1-205ENST00000409588 CDCA5Q96FF9 252 aa18.2■□□□□ 0.5
NIF3L1-205ENST00000409588 FAM205AQ6ZU69 1335 aa18.2■□□□□ 0.5
NIF3L1-205ENST00000409588 SNAP23O00161 211 aa18.19■□□□□ 0.5
NIF3L1-205ENST00000409588 UBTFL1P0CB47 393 aaPredicted RBP18.19■□□□□ 0.5
NIF3L1-205ENST00000409588 DLGAP5Q15398 846 aa18.19■□□□□ 0.5
NIF3L1-205ENST00000409588 NBPF9Q3BBW0 867 aa18.19■□□□□ 0.5
NIF3L1-205ENST00000409588 APOBEC3FQ8IUX4 373 aaKnown RBP18.19■□□□□ 0.5
NIF3L1-205ENST00000409588 KIAA0825Q8IV33 1275 aa18.19■□□□□ 0.5
NIF3L1-205ENST00000409588 MYO1BO43795 1136 aa18.18■□□□□ 0.5
NIF3L1-205ENST00000409588 GABBR2O75899 941 aa18.18■□□□□ 0.5
NIF3L1-205ENST00000409588 NF2P35240 595 aa18.18■□□□□ 0.5
NIF3L1-205ENST00000409588 METTL24Q5JXM2 366 aa18.18■□□□□ 0.5
NIF3L1-205ENST00000409588 VPS37DQ86XT2 251 aa18.18■□□□□ 0.5
NIF3L1-205ENST00000409588 TNS4Q8IZW8 715 aa18.18■□□□□ 0.5
NIF3L1-205ENST00000409588 ZBED3Q96IU2 234 aaPredicted RBP18.18■□□□□ 0.5
NIF3L1-205ENST00000409588 FAM84BQ96KN1 310 aaPredicted RBP18.18■□□□□ 0.5
NIF3L1-205ENST00000409588 MXD3Q9BW11 206 aa18.18■□□□□ 0.5
NIF3L1-205ENST00000409588 PUS3Q9BZE2 481 aaKnown RBP18.18■□□□□ 0.5
NIF3L1-205ENST00000409588 POLR2AP24928 1970 aaKnown RBP18.18■□□□□ 0.5
NIF3L1-205ENST00000409588 GRM1Q13255 1194 aa18.17■□□□□ 0.5
NIF3L1-205ENST00000409588 INTS3Q68E01 1043 aaKnown RBP18.17■□□□□ 0.5
NIF3L1-205ENST00000409588 FBXO33Q7Z6M2 555 aa18.17■□□□□ 0.5
NIF3L1-205ENST00000409588 MIER1Q8N108 512 aa18.17■□□□□ 0.5
NIF3L1-205ENST00000409588 ASTN2O75129 1339 aaPredicted RBP18.17■□□□□ 0.5
NIF3L1-205ENST00000409588 EYA2O00167 538 aa18.16■□□□□ 0.5
NIF3L1-205ENST00000409588 GNAI3P08754 354 aa18.16■□□□□ 0.5
NIF3L1-205ENST00000409588 ZNF157P51786 506 aaPredicted RBP18.16■□□□□ 0.5
NIF3L1-205ENST00000409588 TBC1D22AQ8WUA7 517 aa18.16■□□□□ 0.5
NIF3L1-205ENST00000409588 IFIT1P09914 478 aaKnown RBP18.15■□□□□ 0.5
NIF3L1-205ENST00000409588 PUM3Q15397 648 aaKnown RBP18.15■□□□□ 0.5
NIF3L1-205ENST00000409588 LRRC24Q50LG9 513 aa18.15■□□□□ 0.5
NIF3L1-205ENST00000409588 CERS5Q8N5B7 392 aa18.15■□□□□ 0.5
NIF3L1-205ENST00000409588 VGLL2Q8N8G2 317 aa18.15■□□□□ 0.5
NIF3L1-205ENST00000409588 MRIQ9BWK5 157 aa18.15■□□□□ 0.5
NIF3L1-205ENST00000409588 SERPINA10Q9UK55 444 aa18.15■□□□□ 0.5
NIF3L1-205ENST00000409588 PPP2R3BQ9Y5P8 575 aa18.15■□□□□ 0.5
NIF3L1-205ENST00000409588 UNCXA6NJT0 531 aa18.14■□□□□ 0.49
NIF3L1-205ENST00000409588 AOC2O75106 756 aa18.14■□□□□ 0.49
NIF3L1-205ENST00000409588 CIAO1O76071 339 aa18.14■□□□□ 0.49
NIF3L1-205ENST00000409588 GYG1P46976 350 aa18.14■□□□□ 0.49
NIF3L1-205ENST00000409588 RFX5P48382 616 aaPredicted RBP18.14■□□□□ 0.49
NIF3L1-205ENST00000409588 LBX1P52954 281 aa18.14■□□□□ 0.49
NIF3L1-205ENST00000409588 PTPN12Q05209 780 aaKnown RBP18.14■□□□□ 0.49
NIF3L1-205ENST00000409588 MFSD14BQ5SR56 506 aa18.14■□□□□ 0.49
NIF3L1-205ENST00000409588 DLK2Q6UY11 383 aa18.14■□□□□ 0.49
NIF3L1-205ENST00000409588 SUGT1Q9Y2Z0 365 aa18.14■□□□□ 0.49
NIF3L1-205ENST00000409588 THSD7BQ9C0I4 1608 aa18.13■□□□□ 0.49
NIF3L1-205ENST00000409588 FRAT2O75474 233 aaPredicted RBP18.13■□□□□ 0.49
NIF3L1-205ENST00000409588 HSPA8P11142 646 aaKnown RBP18.13■□□□□ 0.49
NIF3L1-205ENST00000409588 HDLBPQ00341 1268 aaKnown RBP18.13■□□□□ 0.49
NIF3L1-205ENST00000409588 LPIN2Q92539 896 aa18.13■□□□□ 0.49
NIF3L1-205ENST00000409588 FAM155AB1AL88 458 aaPredicted RBP18.12■□□□□ 0.49
NIF3L1-205ENST00000409588 FGFR2P21802 821 aa18.12■□□□□ 0.49
NIF3L1-205ENST00000409588 SUPT20HL1Q3ZLR7 823 aa18.12■□□□□ 0.49
NIF3L1-205ENST00000409588 CFAP100Q494V2 611 aa18.12■□□□□ 0.49
NIF3L1-205ENST00000409588 ATF7IPQ6VMQ6 1270 aa18.12■□□□□ 0.49
NIF3L1-205ENST00000409588 CEP126Q9P2H0 1117 aa18.12■□□□□ 0.49
NIF3L1-205ENST00000409588 COL1A1P02452 1464 aaPredicted RBP18.12■□□□□ 0.49
NIF3L1-205ENST00000409588 SLC10A3P09131 477 aa18.11■□□□□ 0.49
NIF3L1-205ENST00000409588 SLC5A1P13866 664 aa18.11■□□□□ 0.49
NIF3L1-205ENST00000409588 IL15P40933 162 aaPredicted RBP18.11■□□□□ 0.49
NIF3L1-205ENST00000409588 HNRNPUQ00839 825 aaKnown RBP eCLIP18.11■□□□□ 0.49
NIF3L1-205ENST00000409588 TNFAIP1Q13829 316 aa18.11■□□□□ 0.49
NIF3L1-205ENST00000409588 ARMC9Q7Z3E5 817 aa18.11■□□□□ 0.49
NIF3L1-205ENST00000409588 DEFB129Q9H1M3 183 aa18.11■□□□□ 0.49
NIF3L1-205ENST00000409588 COPRSQ9NQ92 184 aa18.11■□□□□ 0.49
NIF3L1-205ENST00000409588 SAGE1Q9NXZ1 904 aa18.11■□□□□ 0.49
NIF3L1-205ENST00000409588 ZNF646O15015 1829 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms