RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 CAP1Q01518 475 aa16.16■□□□□ 0.18
CHRNA1-205ENST00000409542 CHRNDQ07001 517 aa16.16■□□□□ 0.18
CHRNA1-205ENST00000409542 NEXNQ0ZGT2 675 aa16.16■□□□□ 0.18
CHRNA1-205ENST00000409542 PLA2G12BQ9BX93 195 aa16.16■□□□□ 0.18
CHRNA1-205ENST00000409542 TAF5LO75529 589 aa16.15■□□□□ 0.18
CHRNA1-205ENST00000409542 CSF1RP07333 972 aa16.15■□□□□ 0.18
CHRNA1-205ENST00000409542 GJA5P36382 358 aa16.15■□□□□ 0.18
CHRNA1-205ENST00000409542 GCKRQ14397 625 aa16.15■□□□□ 0.18
CHRNA1-205ENST00000409542 MAP3K11Q16584 847 aa16.15■□□□□ 0.18
CHRNA1-205ENST00000409542 HELBQ8NG08 1087 aaPredicted RBP16.15■□□□□ 0.18
CHRNA1-205ENST00000409542 SLC10A4Q96EP9 437 aa16.15■□□□□ 0.18
CHRNA1-205ENST00000409542 WNK4Q96J92 1243 aa16.15■□□□□ 0.18
CHRNA1-205ENST00000409542 ANKRD2Q9GZV1 360 aa16.15■□□□□ 0.18
CHRNA1-205ENST00000409542 TRIM17Q9Y577 477 aa16.15■□□□□ 0.18
CHRNA1-205ENST00000409542 MMP14P50281 582 aa16.14■□□□□ 0.17
CHRNA1-205ENST00000409542 DLGAP5Q15398 846 aa16.14■□□□□ 0.17
CHRNA1-205ENST00000409542 OTOP1Q7RTM1 612 aa16.14■□□□□ 0.17
CHRNA1-205ENST00000409542 MPHOSPH8Q99549 860 aa16.14■□□□□ 0.17
CHRNA1-205ENST00000409542 BRCA2P51587 3418 aa16.13■□□□□ 0.17
CHRNA1-205ENST00000409542 CLRN2A0PK11 232 aa16.13■□□□□ 0.17
CHRNA1-205ENST00000409542 MANSC4A6NHS7 340 aaPredicted RBP16.13■□□□□ 0.17
CHRNA1-205ENST00000409542 F8W031 263 aaPredicted RBP16.13■□□□□ 0.17
CHRNA1-205ENST00000409542 SLC4A2P04920 1241 aa16.13■□□□□ 0.17
CHRNA1-205ENST00000409542 PRMT6Q96LA8 375 aaPredicted RBP16.13■□□□□ 0.17
CHRNA1-205ENST00000409542 JAG2Q9Y219 1238 aa16.13■□□□□ 0.17
CHRNA1-205ENST00000409542 ALDH1A1P00352 501 aa16.12■□□□□ 0.17
CHRNA1-205ENST00000409542 CFAP100Q494V2 611 aa16.12■□□□□ 0.17
CHRNA1-205ENST00000409542 NBPF12Q5TAG4 269 aaPredicted RBP16.12■□□□□ 0.17
CHRNA1-205ENST00000409542 MTMR14Q8NCE2 650 aa16.12■□□□□ 0.17
CHRNA1-205ENST00000409542 STK31Q9BXU1 1019 aa16.12■□□□□ 0.17
CHRNA1-205ENST00000409542 A0A1B0GUL6 1792 aa16.11■□□□□ 0.17
CHRNA1-205ENST00000409542 LAMB1P07942 1786 aa16.11■□□□□ 0.17
CHRNA1-205ENST00000409542 USP2O75604 605 aaPredicted RBP16.11■□□□□ 0.17
CHRNA1-205ENST00000409542 KCNJ4P48050 445 aa16.11■□□□□ 0.17
CHRNA1-205ENST00000409542 TWISTNBQ3B726 338 aaPredicted RBP16.11■□□□□ 0.17
CHRNA1-205ENST00000409542 CD99L2Q8TCZ2 262 aa16.11■□□□□ 0.17
CHRNA1-205ENST00000409542 PTPN18Q99952 460 aa16.11■□□□□ 0.17
CHRNA1-205ENST00000409542 ECM29Q5VYK3 1845 aa16.11■□□□□ 0.17
CHRNA1-205ENST00000409542 COL1A1P02452 1464 aaPredicted RBP16.11■□□□□ 0.17
CHRNA1-205ENST00000409542 ZBTB48P10074 688 aaPredicted RBP16.1■□□□□ 0.17
CHRNA1-205ENST00000409542 INHBEP58166 350 aa16.1■□□□□ 0.17
CHRNA1-205ENST00000409542 CHMP4AQ9BY43 222 aa16.1■□□□□ 0.17
CHRNA1-205ENST00000409542 SPDYE2BA6NHP3 402 aa16.1■□□□□ 0.17
CHRNA1-205ENST00000409542 PPP1R12BO60237 982 aaPredicted RBP16.1■□□□□ 0.17
CHRNA1-205ENST00000409542 SPDYE6P0CI01 402 aa16.1■□□□□ 0.17
CHRNA1-205ENST00000409542 IL1R1P14778 569 aa16.1■□□□□ 0.17
CHRNA1-205ENST00000409542 FOXO4P98177 505 aa16.1■□□□□ 0.17
CHRNA1-205ENST00000409542 FLIIQ13045 1269 aa16.1■□□□□ 0.17
CHRNA1-205ENST00000409542 CRHR2Q13324 411 aa16.1■□□□□ 0.17
CHRNA1-205ENST00000409542 C15orf52Q6ZUT6 534 aaKnown RBP16.1■□□□□ 0.17
CHRNA1-205ENST00000409542 VEZTQ9HBM0 779 aa16.1■□□□□ 0.17
CHRNA1-205ENST00000409542 PTPN22Q9Y2R2 807 aa16.1■□□□□ 0.17
CHRNA1-205ENST00000409542 ANKRD18BA2A2Z9 1011 aa16.09■□□□□ 0.17
CHRNA1-205ENST00000409542 EN2P19622 333 aaPredicted RBP16.09■□□□□ 0.17
CHRNA1-205ENST00000409542 HABP4Q5JVS0 413 aaKnown RBP16.09■□□□□ 0.17
CHRNA1-205ENST00000409542 DNAAF4Q8WXU2 420 aa16.09■□□□□ 0.17
CHRNA1-205ENST00000409542 PPP2R3BQ9Y5P8 575 aa16.09■□□□□ 0.17
CHRNA1-205ENST00000409542 RASA3Q14644 834 aa16.08■□□□□ 0.16
CHRNA1-205ENST00000409542 EPHA10Q5JZY3 1008 aa16.08■□□□□ 0.16
CHRNA1-205ENST00000409542 CDAN1Q8IWY9 1227 aa16.08■□□□□ 0.16
CHRNA1-205ENST00000409542 ZNF594Q96JF6 807 aaPredicted RBP16.08■□□□□ 0.16
CHRNA1-205ENST00000409542 KIAA0100Q14667 2235 aaKnown RBP16.07■□□□□ 0.16
CHRNA1-205ENST00000409542 TESPA1A2RU30 521 aaPredicted RBP16.07■□□□□ 0.16
CHRNA1-205ENST00000409542 FKBP5Q13451 457 aaPredicted RBP16.07■□□□□ 0.16
CHRNA1-205ENST00000409542 SUPT20HL1Q3ZLR7 823 aa16.07■□□□□ 0.16
CHRNA1-205ENST00000409542 INTS3Q68E01 1043 aaKnown RBP16.07■□□□□ 0.16
CHRNA1-205ENST00000409542 WWC1Q8IX03 1113 aa16.07■□□□□ 0.16
CHRNA1-205ENST00000409542 LINS1Q8NG48 757 aa16.07■□□□□ 0.16
CHRNA1-205ENST00000409542 CNKSR2Q8WXI2 1034 aa16.07■□□□□ 0.16
CHRNA1-205ENST00000409542 OTOFQ9HC10 1997 aa16.07■□□□□ 0.16
CHRNA1-205ENST00000409542 PLIN1O60240 522 aa16.06■□□□□ 0.16
CHRNA1-205ENST00000409542 IREB2P48200 963 aaKnown RBP16.06■□□□□ 0.16
CHRNA1-205ENST00000409542 FKBP1AP62942 108 aaKnown RBP16.06■□□□□ 0.16
CHRNA1-205ENST00000409542 ERO1AQ96HE7 468 aa16.06■□□□□ 0.16
CHRNA1-205ENST00000409542 MS4A4AQ96JQ5 239 aa16.06■□□□□ 0.16
CHRNA1-205ENST00000409542 MYH16Q9H6N6 1097 aa16.06■□□□□ 0.16
CHRNA1-205ENST00000409542 ELP3Q9H9T3 547 aa16.06■□□□□ 0.16
CHRNA1-205ENST00000409542 F6X3S4 739 aa16.05■□□□□ 0.16
CHRNA1-205ENST00000409542 RBM5P52756 815 aaKnown RBP eCLIP16.05■□□□□ 0.16
CHRNA1-205ENST00000409542 ZNF804AQ7Z570 1209 aa16.05■□□□□ 0.16
CHRNA1-205ENST00000409542 ARMC5Q96C12 935 aa16.05■□□□□ 0.16
CHRNA1-205ENST00000409542 GCC1Q96CN9 775 aa16.05■□□□□ 0.16
CHRNA1-205ENST00000409542 EFCC1Q9HA90 598 aa16.05■□□□□ 0.16
CHRNA1-205ENST00000409542 CHMP3Q9Y3E7 222 aa16.05■□□□□ 0.16
CHRNA1-205ENST00000409542 RBBP6Q7Z6E9 1792 aaKnown RBP16.05■□□□□ 0.16
CHRNA1-205ENST00000409542 UNCXA6NJT0 531 aa16.04■□□□□ 0.16
CHRNA1-205ENST00000409542 MYO1BO43795 1136 aa16.04■□□□□ 0.16
CHRNA1-205ENST00000409542 SP3Q02447 781 aa16.04■□□□□ 0.16
CHRNA1-205ENST00000409542 IFIT5Q13325 482 aaKnown RBP16.04■□□□□ 0.16
CHRNA1-205ENST00000409542 LMBR1LQ6UX01 489 aa16.04■□□□□ 0.16
CHRNA1-205ENST00000409542 ANKRD13AQ8IZ07 590 aa16.04■□□□□ 0.16
CHRNA1-205ENST00000409542 OPTNQ96CV9 577 aa16.04■□□□□ 0.16
CHRNA1-205ENST00000409542 TEPSINQ96N21 525 aa16.04■□□□□ 0.16
CHRNA1-205ENST00000409542 TDRD3Q9H7E2 651 aaKnown RBP16.04■□□□□ 0.16
CHRNA1-205ENST00000409542 ZNF70Q9UC06 446 aaPredicted RBP16.04■□□□□ 0.16
CHRNA1-205ENST00000409542 RBM19Q9Y4C8 960 aaKnown RBP16.04■□□□□ 0.16
CHRNA1-205ENST00000409542 CCDC27Q2M243 656 aa16.03■□□□□ 0.16
CHRNA1-205ENST00000409542 SPDYE2Q495Y8 402 aa16.03■□□□□ 0.16
CHRNA1-205ENST00000409542 BEND3Q5T5X7 828 aa16.03■□□□□ 0.16
CHRNA1-205ENST00000409542 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms