RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 PDS5AQ29RF7 1337 aaKnown RBP18.2■□□□□ 0.5
SUMO1-207ENST00000409498 PHKA1P46020 1223 aa18.19■□□□□ 0.5
SUMO1-207ENST00000409498 NEUROD6Q96NK8 337 aa18.19■□□□□ 0.5
SUMO1-207ENST00000409498 GNL3LQ9NVN8 582 aaKnown RBP18.19■□□□□ 0.5
SUMO1-207ENST00000409498 ARID4AP29374 1257 aaPredicted RBP18.18■□□□□ 0.5
SUMO1-207ENST00000409498 LMOD1P29536 600 aaPredicted RBP18.18■□□□□ 0.5
SUMO1-207ENST00000409498 EPHX2P34913 555 aa18.18■□□□□ 0.5
SUMO1-207ENST00000409498 EPS15P42566 896 aa18.18■□□□□ 0.5
SUMO1-207ENST00000409498 ZNF280AP59817 542 aaPredicted RBP18.18■□□□□ 0.5
SUMO1-207ENST00000409498 CLASRPQ8N2M8 674 aaKnown RBP18.18■□□□□ 0.5
SUMO1-207ENST00000409498 CNOT7Q9UIV1 285 aaKnown RBP18.18■□□□□ 0.5
SUMO1-207ENST00000409498 DENND2AQ9ULE3 1009 aa18.18■□□□□ 0.5
SUMO1-207ENST00000409498 USP50Q70EL3 339 aaPredicted RBP18.17■□□□□ 0.5
SUMO1-207ENST00000409498 PNMA8AQ86V59 439 aaPredicted RBP18.17■□□□□ 0.5
SUMO1-207ENST00000409498 CERS5Q8N5B7 392 aa18.17■□□□□ 0.5
SUMO1-207ENST00000409498 TBC1D22AQ8WUA7 517 aa18.17■□□□□ 0.5
SUMO1-207ENST00000409498 GCC1Q96CN9 775 aa18.17■□□□□ 0.5
SUMO1-207ENST00000409498 DBNDD2Q9BQY9 259 aa18.17■□□□□ 0.5
SUMO1-207ENST00000409498 LRRCC1Q9C099 1032 aa18.17■□□□□ 0.5
SUMO1-207ENST00000409498 ADARB2Q9NS39 739 aaKnown RBP18.17■□□□□ 0.5
SUMO1-207ENST00000409498 DBNLQ9UJU6 430 aaKnown RBP18.17■□□□□ 0.5
SUMO1-207ENST00000409498 MYH13Q9UKX3 1938 aa18.17■□□□□ 0.5
SUMO1-207ENST00000409498 SALL1Q9NSC2 1324 aa18.17■□□□□ 0.5
SUMO1-207ENST00000409498 ADAMTSL1Q8N6G6 1762 aa18.17■□□□□ 0.5
SUMO1-207ENST00000409498 H7C1D1 291 aa18.16■□□□□ 0.5
SUMO1-207ENST00000409498 UQCRFS1P1P0C7P4 283 aa18.16■□□□□ 0.5
SUMO1-207ENST00000409498 IRX6P78412 446 aaPredicted RBP18.16■□□□□ 0.5
SUMO1-207ENST00000409498 MICALL2Q8IY33 904 aa18.16■□□□□ 0.5
SUMO1-207ENST00000409498 WDR66Q8TBY9 1149 aa18.16■□□□□ 0.5
SUMO1-207ENST00000409498 MXD3Q9BW11 206 aa18.16■□□□□ 0.5
SUMO1-207ENST00000409498 RWDD1Q9H446 243 aaPredicted RBP18.16■□□□□ 0.5
SUMO1-207ENST00000409498 IL1RAPL2Q9NP60 686 aa18.16■□□□□ 0.5
SUMO1-207ENST00000409498 SUGT1Q9Y2Z0 365 aa18.16■□□□□ 0.5
SUMO1-207ENST00000409498 COL1A1P02452 1464 aaPredicted RBP18.15■□□□□ 0.5
SUMO1-207ENST00000409498 USP17L8P0C7I0 530 aa18.15■□□□□ 0.5
SUMO1-207ENST00000409498 CCDC158Q5M9N0 1113 aa18.15■□□□□ 0.5
SUMO1-207ENST00000409498 SMC5Q8IY18 1101 aa18.15■□□□□ 0.5
SUMO1-207ENST00000409498 CCDC8Q9H0W5 538 aaPredicted RBP18.15■□□□□ 0.5
SUMO1-207ENST00000409498 IQSEC3Q9UPP2 1182 aaPredicted RBP18.15■□□□□ 0.5
SUMO1-207ENST00000409498 FRAT2O75474 233 aaPredicted RBP18.14■□□□□ 0.49
SUMO1-207ENST00000409498 TOMM70O94826 608 aa18.14■□□□□ 0.49
SUMO1-207ENST00000409498 RASGRF1Q13972 1273 aa18.14■□□□□ 0.49
SUMO1-207ENST00000409498 MFSD14BQ5SR56 506 aa18.14■□□□□ 0.49
SUMO1-207ENST00000409498 GORABQ5T7V8 394 aa18.14■□□□□ 0.49
SUMO1-207ENST00000409498 AACSQ86V21 672 aa18.14■□□□□ 0.49
SUMO1-207ENST00000409498 FBXW7Q969H0 707 aa18.14■□□□□ 0.49
SUMO1-207ENST00000409498 MRIQ9BWK5 157 aa18.14■□□□□ 0.49
SUMO1-207ENST00000409498 PGAP2Q9UHJ9 254 aa18.14■□□□□ 0.49
SUMO1-207ENST00000409498 AKAP11Q9UKA4 1901 aa18.13■□□□□ 0.49
SUMO1-207ENST00000409498 SHTN1A0MZ66 631 aa18.13■□□□□ 0.49
SUMO1-207ENST00000409498 IGHDP01880 384 aa18.13■□□□□ 0.49
SUMO1-207ENST00000409498 MTMR14Q8NCE2 650 aa18.13■□□□□ 0.49
SUMO1-207ENST00000409498 RBM46Q8TBY0 533 aaKnown RBP18.13■□□□□ 0.49
SUMO1-207ENST00000409498 TLR7Q9NYK1 1049 aaKnown RBP18.13■□□□□ 0.49
SUMO1-207ENST00000409498 HMG20BQ9P0W2 317 aa18.13■□□□□ 0.49
SUMO1-207ENST00000409498 APBB1O00213 710 aa18.12■□□□□ 0.49
SUMO1-207ENST00000409498 IGSF3O75054 1194 aa18.12■□□□□ 0.49
SUMO1-207ENST00000409498 MCAMP43121 646 aa18.12■□□□□ 0.49
SUMO1-207ENST00000409498 HIRAP54198 1017 aaPredicted RBP18.12■□□□□ 0.49
SUMO1-207ENST00000409498 LDHDQ86WU2 507 aa18.12■□□□□ 0.49
SUMO1-207ENST00000409498 OGFOD1Q8N543 542 aa18.12■□□□□ 0.49
SUMO1-207ENST00000409498 ZC3H15Q8WU90 426 aaKnown RBP18.12■□□□□ 0.49
SUMO1-207ENST00000409498 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.12■□□□□ 0.49
SUMO1-207ENST00000409498 HDAC9Q9UKV0 1011 aa18.12■□□□□ 0.49
SUMO1-207ENST00000409498 JAG2Q9Y219 1238 aa18.12■□□□□ 0.49
SUMO1-207ENST00000409498 IFIT2P09913 472 aaKnown RBP18.11■□□□□ 0.49
SUMO1-207ENST00000409498 HDLBPQ00341 1268 aaKnown RBP18.11■□□□□ 0.49
SUMO1-207ENST00000409498 CHAF1AQ13111 956 aaPredicted RBP18.11■□□□□ 0.49
SUMO1-207ENST00000409498 TTC39AQ5SRH9 613 aa18.11■□□□□ 0.49
SUMO1-207ENST00000409498 KIAA0825Q8IV33 1275 aa18.11■□□□□ 0.49
SUMO1-207ENST00000409498 C16orf71Q8IYS4 520 aaPredicted RBP18.11■□□□□ 0.49
SUMO1-207ENST00000409498 ZGPATQ8N5A5 531 aaKnown RBP18.11■□□□□ 0.49
SUMO1-207ENST00000409498 SPATA5Q8NB90 893 aa18.11■□□□□ 0.49
SUMO1-207ENST00000409498 ZBED3Q96IU2 234 aaPredicted RBP18.11■□□□□ 0.49
SUMO1-207ENST00000409498 MYOZ2Q9NPC6 264 aa18.11■□□□□ 0.49
SUMO1-207ENST00000409498 SMARCA5O60264 1052 aaPredicted RBP18.1■□□□□ 0.49
SUMO1-207ENST00000409498 SCARF1Q14162 830 aa18.1■□□□□ 0.49
SUMO1-207ENST00000409498 GRIK5Q16478 980 aa18.1■□□□□ 0.49
SUMO1-207ENST00000409498 SAMD7Q7Z3H4 446 aa18.1■□□□□ 0.49
SUMO1-207ENST00000409498 TRPM4Q8TD43 1214 aa18.1■□□□□ 0.49
SUMO1-207ENST00000409498 EGFRP00533 1210 aa18.09■□□□□ 0.49
SUMO1-207ENST00000409498 POTEIP0CG38 1075 aa18.09■□□□□ 0.49
SUMO1-207ENST00000409498 POTEJP0CG39 1038 aa18.09■□□□□ 0.49
SUMO1-207ENST00000409498 KIF4BQ2VIQ3 1234 aa18.09■□□□□ 0.49
SUMO1-207ENST00000409498 SERPINA10Q9UK55 444 aa18.09■□□□□ 0.49
SUMO1-207ENST00000409498 MAST3O60307 1309 aa18.08■□□□□ 0.49
SUMO1-207ENST00000409498 FSTL1Q12841 308 aa18.08■□□□□ 0.48
SUMO1-207ENST00000409498 TBC1D10BQ4KMP7 808 aaPredicted RBP18.08■□□□□ 0.48
SUMO1-207ENST00000409498 CHADLQ6NUI6 762 aa18.08■□□□□ 0.48
SUMO1-207ENST00000409498 SMC1BQ8NDV3 1235 aa18.08■□□□□ 0.48
SUMO1-207ENST00000409498 TTF2Q9UNY4 1162 aaKnown RBP18.08■□□□□ 0.48
SUMO1-207ENST00000409498 SALL3Q9BXA9 1300 aa18.07■□□□□ 0.48
SUMO1-207ENST00000409498 WNT10BO00744 389 aa18.07■□□□□ 0.48
SUMO1-207ENST00000409498 ATP5JP18859 108 aa18.07■□□□□ 0.48
SUMO1-207ENST00000409498 EAPPQ56P03 285 aaPredicted RBP18.07■□□□□ 0.48
SUMO1-207ENST00000409498 SPTY2D1Q68D10 685 aaPredicted RBP18.07■□□□□ 0.48
SUMO1-207ENST00000409498 HHIPL2Q6UWX4 724 aa18.07■□□□□ 0.48
SUMO1-207ENST00000409498 F8W031 263 aaPredicted RBP18.06■□□□□ 0.48
SUMO1-207ENST00000409498 CYP2E1P05181 493 aaPredicted RBP18.06■□□□□ 0.48
SUMO1-207ENST00000409498 LDHBP07195 334 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms