RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 MYOZ2Q9NPC6 264 aa12.16□□□□□ -0.46
NIF3L1-202ENST00000409020 TRPM7Q96QT4 1865 aa12.15□□□□□ -0.46
NIF3L1-202ENST00000409020 NBPF9Q3BBW0 867 aa12.15□□□□□ -0.46
NIF3L1-202ENST00000409020 ANGEL2Q5VTE6 544 aaKnown RBP12.15□□□□□ -0.46
NIF3L1-202ENST00000409020 LDHAL6AQ6ZMR3 332 aa12.15□□□□□ -0.46
NIF3L1-202ENST00000409020 KLHDC4Q8TBB5 520 aa12.15□□□□□ -0.46
NIF3L1-202ENST00000409020 CAPNS2Q96L46 248 aa12.15□□□□□ -0.46
NIF3L1-202ENST00000409020 USP44Q9H0E7 712 aa12.15□□□□□ -0.46
NIF3L1-202ENST00000409020 TULP1O00294 542 aaPredicted RBP12.14□□□□□ -0.47
NIF3L1-202ENST00000409020 GTF2IP78347 998 aa12.14□□□□□ -0.47
NIF3L1-202ENST00000409020 ALDH1L2Q3SY69 923 aa12.14□□□□□ -0.47
NIF3L1-202ENST00000409020 STRIP1Q5VSL9 837 aa12.14□□□□□ -0.47
NIF3L1-202ENST00000409020 CERS5Q8N5B7 392 aa12.14□□□□□ -0.47
NIF3L1-202ENST00000409020 CD209Q9NNX6 404 aa12.14□□□□□ -0.47
NIF3L1-202ENST00000409020 CNNM1Q9NRU3 951 aa12.14□□□□□ -0.47
NIF3L1-202ENST00000409020 NOB1Q9ULX3 412 aaKnown RBP12.14□□□□□ -0.47
NIF3L1-202ENST00000409020 CENPFP49454 3210 aa12.14□□□□□ -0.47
NIF3L1-202ENST00000409020 SASH1O94885 1247 aa12.13□□□□□ -0.47
NIF3L1-202ENST00000409020 RABL6Q3YEC7 729 aaPredicted RBP12.13□□□□□ -0.47
NIF3L1-202ENST00000409020 LRRC24Q50LG9 513 aa12.13□□□□□ -0.47
NIF3L1-202ENST00000409020 KIAA0825Q8IV33 1275 aa12.13□□□□□ -0.47
NIF3L1-202ENST00000409020 ZIC5Q96T25 663 aa12.13□□□□□ -0.47
NIF3L1-202ENST00000409020 WBP1LQ9NX94 342 aa12.13□□□□□ -0.47
NIF3L1-202ENST00000409020 PCDHAC2Q9Y5I4 1007 aa12.13□□□□□ -0.47
NIF3L1-202ENST00000409020 THSD7BQ9C0I4 1608 aa12.13□□□□□ -0.47
NIF3L1-202ENST00000409020 POLR2AP24928 1970 aaKnown RBP12.13□□□□□ -0.47
NIF3L1-202ENST00000409020 PRAMEF18Q5VWM3 479 aa12.13□□□□□ -0.47
NIF3L1-202ENST00000409020 TTLL5Q6EMB2 1281 aa12.13□□□□□ -0.47
NIF3L1-202ENST00000409020 DCPSQ96C86 337 aaKnown RBP12.13□□□□□ -0.47
NIF3L1-202ENST00000409020 RARSP54136 660 aaKnown RBP12.12□□□□□ -0.47
NIF3L1-202ENST00000409020 CDCA5Q96FF9 252 aa12.12□□□□□ -0.47
NIF3L1-202ENST00000409020 TNNQ9UQP3 1299 aa12.12□□□□□ -0.47
NIF3L1-202ENST00000409020 RIPOR2Q9Y4F9 1068 aa12.12□□□□□ -0.47
NIF3L1-202ENST00000409020 AOX1Q06278 1338 aa12.12□□□□□ -0.47
NIF3L1-202ENST00000409020 WNT10BO00744 389 aa12.11□□□□□ -0.47
NIF3L1-202ENST00000409020 GYG1P46976 350 aa12.11□□□□□ -0.47
NIF3L1-202ENST00000409020 HUNKP57058 714 aa12.11□□□□□ -0.47
NIF3L1-202ENST00000409020 C15orf52Q6ZUT6 534 aaKnown RBP12.11□□□□□ -0.47
NIF3L1-202ENST00000409020 HTTP42858 3142 aa12.11□□□□□ -0.47
NIF3L1-202ENST00000409020 BRCA2P51587 3418 aa12.11□□□□□ -0.47
NIF3L1-202ENST00000409020 F8W031 263 aaPredicted RBP12.1□□□□□ -0.47
NIF3L1-202ENST00000409020 IL1R1P14778 569 aa12.1□□□□□ -0.47
NIF3L1-202ENST00000409020 MOB2Q70IA6 237 aa12.1□□□□□ -0.47
NIF3L1-202ENST00000409020 SULF1Q8IWU6 871 aa12.1□□□□□ -0.47
NIF3L1-202ENST00000409020 TSKSQ9UJT2 592 aa12.1□□□□□ -0.47
NIF3L1-202ENST00000409020 RFX5P48382 616 aaPredicted RBP12.1□□□□□ -0.47
NIF3L1-202ENST00000409020 VGLL2Q8N8G2 317 aa12.1□□□□□ -0.47
NIF3L1-202ENST00000409020 GBA2Q9HCG7 927 aaPredicted RBP12.1□□□□□ -0.47
NIF3L1-202ENST00000409020 MYO3BQ8WXR4 1341 aa12.09□□□□□ -0.47
NIF3L1-202ENST00000409020 BCAR3O75815 825 aa12.09□□□□□ -0.47
NIF3L1-202ENST00000409020 HSPA8P11142 646 aaKnown RBP12.09□□□□□ -0.47
NIF3L1-202ENST00000409020 ECE1P42892 770 aa12.09□□□□□ -0.47
NIF3L1-202ENST00000409020 LBX1P52954 281 aa12.09□□□□□ -0.47
NIF3L1-202ENST00000409020 ZNF804AQ7Z570 1209 aa12.09□□□□□ -0.47
NIF3L1-202ENST00000409020 OGFOD1Q8N543 542 aa12.09□□□□□ -0.47
NIF3L1-202ENST00000409020 AIDAQ96BJ3 306 aa12.09□□□□□ -0.47
NIF3L1-202ENST00000409020 ZBED3Q96IU2 234 aaPredicted RBP12.09□□□□□ -0.47
NIF3L1-202ENST00000409020 FAM84BQ96KN1 310 aaPredicted RBP12.09□□□□□ -0.47
NIF3L1-202ENST00000409020 IQSEC3Q9UPP2 1182 aaPredicted RBP12.09□□□□□ -0.47
NIF3L1-202ENST00000409020 FAM155AB1AL88 458 aaPredicted RBP12.08□□□□□ -0.48
NIF3L1-202ENST00000409020 CT47B1P0C2W7 299 aaPredicted RBP12.08□□□□□ -0.48
NIF3L1-202ENST00000409020 GRIK5Q16478 980 aa12.08□□□□□ -0.48
NIF3L1-202ENST00000409020 METTL24Q5JXM2 366 aa12.08□□□□□ -0.48
NIF3L1-202ENST00000409020 TNS4Q8IZW8 715 aa12.08□□□□□ -0.48
NIF3L1-202ENST00000409020 HHIPL1Q96JK4 782 aa12.08□□□□□ -0.48
NIF3L1-202ENST00000409020 MEIS3Q99687 375 aa12.08□□□□□ -0.48
NIF3L1-202ENST00000409020 FZD1Q9UP38 647 aa12.08□□□□□ -0.48
NIF3L1-202ENST00000409020 MROH5Q6ZUA9 1318 aa12.08□□□□□ -0.48
NIF3L1-202ENST00000409020 CTCFP49711 727 aaPredicted RBP12.07□□□□□ -0.48
NIF3L1-202ENST00000409020 BRPF1P55201 1214 aaPredicted RBP12.07□□□□□ -0.48
NIF3L1-202ENST00000409020 HNRNPUQ00839 825 aaKnown RBP eCLIP12.07□□□□□ -0.48
NIF3L1-202ENST00000409020 MAP2K1Q02750 393 aaPredicted RBP12.07□□□□□ -0.48
NIF3L1-202ENST00000409020 PTPN12Q05209 780 aaKnown RBP12.07□□□□□ -0.48
NIF3L1-202ENST00000409020 UBE4AQ14139 1066 aa12.07□□□□□ -0.48
NIF3L1-202ENST00000409020 LRRFIP2Q9Y608 721 aaKnown RBP12.07□□□□□ -0.48
NIF3L1-202ENST00000409020 PITPNM2Q9BZ72 1349 aa12.07□□□□□ -0.48
NIF3L1-202ENST00000409020 HIBADHP31937 336 aaKnown RBP12.06□□□□□ -0.48
NIF3L1-202ENST00000409020 RGMBQ6NW40 437 aa12.06□□□□□ -0.48
NIF3L1-202ENST00000409020 C2orf69Q8N8R5 385 aa12.06□□□□□ -0.48
NIF3L1-202ENST00000409020 TDRD7Q8NHU6 1098 aaKnown RBP12.06□□□□□ -0.48
NIF3L1-202ENST00000409020 SIL1Q9H173 461 aa12.06□□□□□ -0.48
NIF3L1-202ENST00000409020 CLRN2A0PK11 232 aa12.06□□□□□ -0.48
NIF3L1-202ENST00000409020 RRP9O43818 475 aaKnown RBP12.06□□□□□ -0.48
NIF3L1-202ENST00000409020 PDE8BO95263 885 aa12.06□□□□□ -0.48
NIF3L1-202ENST00000409020 UBTFL1P0CB47 393 aaPredicted RBP12.06□□□□□ -0.48
NIF3L1-202ENST00000409020 MAP2K2P36507 400 aa12.06□□□□□ -0.48
NIF3L1-202ENST00000409020 BCAMP50895 628 aa12.06□□□□□ -0.48
NIF3L1-202ENST00000409020 ATG9AQ7Z3C6 839 aa12.06□□□□□ -0.48
NIF3L1-202ENST00000409020 FBXO33Q7Z6M2 555 aa12.06□□□□□ -0.48
NIF3L1-202ENST00000409020 API5Q9BZZ5 524 aaKnown RBP12.06□□□□□ -0.48
NIF3L1-202ENST00000409020 PA2G4Q9UQ80 394 aaKnown RBP12.06□□□□□ -0.48
NIF3L1-202ENST00000409020 TRIM27P14373 513 aa12.05□□□□□ -0.48
NIF3L1-202ENST00000409020 FGFR2P21802 821 aa12.05□□□□□ -0.48
NIF3L1-202ENST00000409020 ZNF157P51786 506 aaPredicted RBP12.05□□□□□ -0.48
NIF3L1-202ENST00000409020 CFAP100Q494V2 611 aa12.05□□□□□ -0.48
NIF3L1-202ENST00000409020 MFSD14BQ5SR56 506 aa12.05□□□□□ -0.48
NIF3L1-202ENST00000409020 PRMT6Q96LA8 375 aaPredicted RBP12.05□□□□□ -0.48
NIF3L1-202ENST00000409020 HDAC9Q9UKV0 1011 aa12.05□□□□□ -0.48
NIF3L1-202ENST00000409020 FAM205AQ6ZU69 1335 aa12.05□□□□□ -0.48
NIF3L1-202ENST00000409020 SPDYE2BA6NHP3 402 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms