RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 ZBED3Q96IU2 234 aaPredicted RBP24.22■■□□□ 1.47
SMARCB1-204ENST00000407422 BEGAINQ9BUH8 593 aa24.22■■□□□ 1.47
SMARCB1-204ENST00000407422 FAM155AB1AL88 458 aaPredicted RBP24.21■■□□□ 1.47
SMARCB1-204ENST00000407422 F8W031 263 aaPredicted RBP24.21■■□□□ 1.47
SMARCB1-204ENST00000407422 FAM84BQ96KN1 310 aaPredicted RBP24.21■■□□□ 1.47
SMARCB1-204ENST00000407422 NOGQ13253 232 aa24.21■■□□□ 1.47
SMARCB1-204ENST00000407422 DIEXFQ68CQ4 756 aaKnown RBP24.21■■□□□ 1.47
SMARCB1-204ENST00000407422 TSKSQ9UJT2 592 aa24.21■■□□□ 1.47
SMARCB1-204ENST00000407422 PCDHAC2Q9Y5I4 1007 aa24.21■■□□□ 1.47
SMARCB1-204ENST00000407422 HIBADHP31937 336 aaKnown RBP24.2■■□□□ 1.46
SMARCB1-204ENST00000407422 ZNF157P51786 506 aaPredicted RBP24.2■■□□□ 1.46
SMARCB1-204ENST00000407422 METTL24Q5JXM2 366 aa24.2■■□□□ 1.46
SMARCB1-204ENST00000407422 VGLL2Q8N8G2 317 aa24.2■■□□□ 1.46
SMARCB1-204ENST00000407422 TDRD7Q8NHU6 1098 aaKnown RBP24.2■■□□□ 1.46
SMARCB1-204ENST00000407422 MOB2Q70IA6 237 aa24.19■■□□□ 1.46
SMARCB1-204ENST00000407422 API5Q9BZZ5 524 aaKnown RBP24.19■■□□□ 1.46
SMARCB1-204ENST00000407422 PAPPA2Q9BXP8 1791 aa24.19■■□□□ 1.46
SMARCB1-204ENST00000407422 FAM205AQ6ZU69 1335 aa24.18■■□□□ 1.46
SMARCB1-204ENST00000407422 CAPN15O75808 1086 aa24.18■■□□□ 1.46
SMARCB1-204ENST00000407422 RFX5P48382 616 aaPredicted RBP24.18■■□□□ 1.46
SMARCB1-204ENST00000407422 FKBP1AP62942 108 aaKnown RBP24.18■■□□□ 1.46
SMARCB1-204ENST00000407422 DLGAP5Q15398 846 aa24.18■■□□□ 1.46
SMARCB1-204ENST00000407422 PDE8BO95263 885 aa24.17■■□□□ 1.46
SMARCB1-204ENST00000407422 CCDC102AQ96A19 550 aa24.17■■□□□ 1.46
SMARCB1-204ENST00000407422 ECM29Q5VYK3 1845 aa24.17■■□□□ 1.46
SMARCB1-204ENST00000407422 UBTFL1P0CB47 393 aaPredicted RBP24.17■■□□□ 1.46
SMARCB1-204ENST00000407422 FKBP1BP68106 108 aa24.16■■□□□ 1.46
SMARCB1-204ENST00000407422 CFAP100Q494V2 611 aa24.16■■□□□ 1.46
SMARCB1-204ENST00000407422 FBXO33Q7Z6M2 555 aa24.16■■□□□ 1.46
SMARCB1-204ENST00000407422 MTMR14Q8NCE2 650 aa24.16■■□□□ 1.46
SMARCB1-204ENST00000407422 IQSEC3Q9UPP2 1182 aaPredicted RBP24.16■■□□□ 1.46
SMARCB1-204ENST00000407422 AOX1Q06278 1338 aa24.15■■□□□ 1.46
SMARCB1-204ENST00000407422 PTPN12Q05209 780 aaKnown RBP24.15■■□□□ 1.46
SMARCB1-204ENST00000407422 MFSD14BQ5SR56 506 aa24.15■■□□□ 1.46
SMARCB1-204ENST00000407422 APOBEC3FQ8IUX4 373 aaKnown RBP24.15■■□□□ 1.46
SMARCB1-204ENST00000407422 PRMT6Q96LA8 375 aaPredicted RBP24.15■■□□□ 1.46
SMARCB1-204ENST00000407422 UBE2Q2LH0YL09 131 aa24.14■■□□□ 1.46
SMARCB1-204ENST00000407422 SLC10A3P09131 477 aa24.14■■□□□ 1.46
SMARCB1-204ENST00000407422 KIF23Q02241 960 aaPredicted RBP24.14■■□□□ 1.46
SMARCB1-204ENST00000407422 KIF16BQ96L93 1317 aa24.14■■□□□ 1.45
SMARCB1-204ENST00000407422 ARAP2Q8WZ64 1704 aa24.14■■□□□ 1.45
SMARCB1-204ENST00000407422 SPDYE2BA6NHP3 402 aa24.13■■□□□ 1.45
SMARCB1-204ENST00000407422 EYA2O00167 538 aa24.13■■□□□ 1.45
SMARCB1-204ENST00000407422 SPDYE6P0CI01 402 aa24.13■■□□□ 1.45
SMARCB1-204ENST00000407422 VPS37DQ86XT2 251 aa24.13■■□□□ 1.45
SMARCB1-204ENST00000407422 MEIS3Q99687 375 aa24.13■■□□□ 1.45
SMARCB1-204ENST00000407422 LRRFIP2Q9Y608 721 aaKnown RBP24.13■■□□□ 1.45
SMARCB1-204ENST00000407422 CASP8AP2Q9UKL3 1982 aa24.13■■□□□ 1.45
SMARCB1-204ENST00000407422 RASAL3Q86YV0 1011 aa24.13■■□□□ 1.45
SMARCB1-204ENST00000407422 ARHGAP45Q92619 1136 aa24.13■■□□□ 1.45
SMARCB1-204ENST00000407422 CLRN2A0PK11 232 aa24.12■■□□□ 1.45
SMARCB1-204ENST00000407422 CA12O43570 354 aa24.12■■□□□ 1.45
SMARCB1-204ENST00000407422 BCAR3O75815 825 aa24.12■■□□□ 1.45
SMARCB1-204ENST00000407422 BCAMP50895 628 aa24.12■■□□□ 1.45
SMARCB1-204ENST00000407422 RBM5P52756 815 aaKnown RBP eCLIP24.12■■□□□ 1.45
SMARCB1-204ENST00000407422 HNRNPUQ00839 825 aaKnown RBP eCLIP24.12■■□□□ 1.45
SMARCB1-204ENST00000407422 TTLL12Q14166 644 aaPredicted RBP24.12■■□□□ 1.45
SMARCB1-204ENST00000407422 CAVIN4Q5BKX8 364 aa24.12■■□□□ 1.45
SMARCB1-204ENST00000407422 ATG9AQ7Z3C6 839 aa24.12■■□□□ 1.45
SMARCB1-204ENST00000407422 DEFB129Q9H1M3 183 aa24.12■■□□□ 1.45
SMARCB1-204ENST00000407422 TTF2Q9UNY4 1162 aaKnown RBP24.12■■□□□ 1.45
SMARCB1-204ENST00000407422 FGFR2P21802 821 aa24.11■■□□□ 1.45
SMARCB1-204ENST00000407422 PUM3Q15397 648 aaKnown RBP24.11■■□□□ 1.45
SMARCB1-204ENST00000407422 GRIK5Q16478 980 aa24.11■■□□□ 1.45
SMARCB1-204ENST00000407422 SIL1Q9H173 461 aa24.11■■□□□ 1.45
SMARCB1-204ENST00000407422 NF2P35240 595 aa24.1■■□□□ 1.45
SMARCB1-204ENST00000407422 CHAF1AQ13111 956 aaPredicted RBP24.1■■□□□ 1.45
SMARCB1-204ENST00000407422 PRKG1Q13976 671 aa24.1■■□□□ 1.45
SMARCB1-204ENST00000407422 INTS3Q68E01 1043 aaKnown RBP24.1■■□□□ 1.45
SMARCB1-204ENST00000407422 TNNQ9UQP3 1299 aa24.1■■□□□ 1.45
SMARCB1-204ENST00000407422 AKAP11Q9UKA4 1901 aa24.1■■□□□ 1.45
SMARCB1-204ENST00000407422 FZD1Q9UP38 647 aa24.1■■□□□ 1.45
SMARCB1-204ENST00000407422 MYO1BO43795 1136 aa24.09■■□□□ 1.45
SMARCB1-204ENST00000407422 FRAT2O75474 233 aaPredicted RBP24.09■■□□□ 1.45
SMARCB1-204ENST00000407422 TRIM27P14373 513 aa24.09■■□□□ 1.45
SMARCB1-204ENST00000407422 CSRNP1Q96S65 589 aa24.09■■□□□ 1.45
SMARCB1-204ENST00000407422 VEZTQ9HBM0 779 aa24.09■■□□□ 1.45
SMARCB1-204ENST00000407422 IFIT1P09914 478 aaKnown RBP24.08■■□□□ 1.45
SMARCB1-204ENST00000407422 FRAT1Q92837 279 aaPredicted RBP24.08■■□□□ 1.45
SMARCB1-204ENST00000407422 SERPINA10Q9UK55 444 aa24.08■■□□□ 1.45
SMARCB1-204ENST00000407422 PA2G4Q9UQ80 394 aaKnown RBP24.08■■□□□ 1.45
SMARCB1-204ENST00000407422 COL1A1P02452 1464 aaPredicted RBP24.08■■□□□ 1.44
SMARCB1-204ENST00000407422 MYH13Q9UKX3 1938 aa24.07■■□□□ 1.44
SMARCB1-204ENST00000407422 HDAC5Q9UQL6 1122 aa24.06■■□□□ 1.44
SMARCB1-204ENST00000407422 SSC5DA1L4H1 1573 aa24.06■■□□□ 1.44
SMARCB1-204ENST00000407422 IPO8O15397 1037 aaKnown RBP24.06■■□□□ 1.44
SMARCB1-204ENST00000407422 CIAO1O76071 339 aa24.06■■□□□ 1.44
SMARCB1-204ENST00000407422 ATF7IPQ6VMQ6 1270 aa24.06■■□□□ 1.44
SMARCB1-204ENST00000407422 LPIN2Q92539 896 aa24.06■■□□□ 1.44
SMARCB1-204ENST00000407422 SLC5A1P13866 664 aa24.05■■□□□ 1.44
SMARCB1-204ENST00000407422 CRKP46108 304 aa24.05■■□□□ 1.44
SMARCB1-204ENST00000407422 ARMC9Q7Z3E5 817 aa24.05■■□□□ 1.44
SMARCB1-204ENST00000407422 DZIP1LQ8IYY4 767 aaKnown RBP24.05■■□□□ 1.44
SMARCB1-204ENST00000407422 CLUAP1Q96AJ1 413 aa24.05■■□□□ 1.44
SMARCB1-204ENST00000407422 TDRD3Q9H7E2 651 aaKnown RBP24.05■■□□□ 1.44
SMARCB1-204ENST00000407422 RNF186Q9NXI6 227 aa24.05■■□□□ 1.44
SMARCB1-204ENST00000407422 FBXO3Q9UK99 471 aa24.05■■□□□ 1.44
SMARCB1-204ENST00000407422 ANGEL1Q9UNK9 670 aaKnown RBP24.05■■□□□ 1.44
SMARCB1-204ENST00000407422 TRPA1O75762 1119 aa24.04■■□□□ 1.44
SMARCB1-204ENST00000407422 SPDYE2Q495Y8 402 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms