RNA–Protein interactions for RNA: ENST00000407008.7

NLK-201, Transcript of nemo like kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLK, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-201ENST00000407008 MRC1P22897 1456 aa9.7□□□□□ -0.86
NLK-201ENST00000407008 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.69□□□□□ -0.86
NLK-201ENST00000407008 POLR3DP05423 398 aaPredicted RBP9.69□□□□□ -0.86
NLK-201ENST00000407008 PDE6BP35913 854 aa9.69□□□□□ -0.86
NLK-201ENST00000407008 ZAP70P43403 619 aa9.69□□□□□ -0.86
NLK-201ENST00000407008 UBE3CQ15386 1083 aa9.69□□□□□ -0.86
NLK-201ENST00000407008 ESR2Q92731 530 aa9.69□□□□□ -0.86
NLK-201ENST00000407008 PUS3Q9BZE2 481 aaKnown RBP9.69□□□□□ -0.86
NLK-201ENST00000407008 IFIT3O14879 490 aaKnown RBP9.69□□□□□ -0.86
NLK-201ENST00000407008 CHRNDQ07001 517 aa9.69□□□□□ -0.86
NLK-201ENST00000407008 LRRC37A3O60309 1634 aa9.69□□□□□ -0.86
NLK-201ENST00000407008 CARMIL3Q8ND23 1372 aa9.69□□□□□ -0.86
NLK-201ENST00000407008 GOLGA8BA8MQT2 603 aa9.69□□□□□ -0.86
NLK-201ENST00000407008 GPAA1O43292 621 aa9.69□□□□□ -0.86
NLK-201ENST00000407008 CSF1RP07333 972 aa9.69□□□□□ -0.86
NLK-201ENST00000407008 PLCB2Q00722 1185 aa9.69□□□□□ -0.86
NLK-201ENST00000407008 LEMD3Q9Y2U8 911 aa9.69□□□□□ -0.86
NLK-201ENST00000407008 SLC12A7Q9Y666 1083 aa9.69□□□□□ -0.86
NLK-201ENST00000407008 PRPF40AO75400 957 aaKnown RBP9.68□□□□□ -0.86
NLK-201ENST00000407008 CAMTA2O94983 1202 aa9.68□□□□□ -0.86
NLK-201ENST00000407008 LDHBP07195 334 aaKnown RBP9.68□□□□□ -0.86
NLK-201ENST00000407008 ATP2B4P23634 1241 aa9.68□□□□□ -0.86
NLK-201ENST00000407008 AK2P54819 239 aa9.68□□□□□ -0.86
NLK-201ENST00000407008 PPP4R3BQ5MIZ7 849 aa9.68□□□□□ -0.86
NLK-201ENST00000407008 TBC1D22AQ8WUA7 517 aa9.68□□□□□ -0.86
NLK-201ENST00000407008 TNPO1Q92973 898 aaKnown RBP9.68□□□□□ -0.86
NLK-201ENST00000407008 SCAND2PQ9GZW5 306 aaPredicted RBP9.68□□□□□ -0.86
NLK-201ENST00000407008 MKNK2Q9HBH9 465 aa9.68□□□□□ -0.86
NLK-201ENST00000407008 STX6O43752 255 aa9.68□□□□□ -0.86
NLK-201ENST00000407008 IGSF3O75054 1194 aa9.68□□□□□ -0.86
NLK-201ENST00000407008 RPS6KB1P23443 525 aa9.68□□□□□ -0.86
NLK-201ENST00000407008 ZMYM1Q5SVZ6 1142 aa9.68□□□□□ -0.86
NLK-201ENST00000407008 BRF1Q92994 677 aa9.68□□□□□ -0.86
NLK-201ENST00000407008 TLR7Q9NYK1 1049 aaKnown RBP9.68□□□□□ -0.86
NLK-201ENST00000407008 TAF5LO75529 589 aa9.68□□□□□ -0.86
NLK-201ENST00000407008 CLCN1P35523 988 aa9.68□□□□□ -0.86
NLK-201ENST00000407008 HAND2P61296 217 aa9.68□□□□□ -0.86
NLK-201ENST00000407008 TMEM67Q5HYA8 995 aa9.68□□□□□ -0.86
NLK-201ENST00000407008 SMAP1Q8IYB5 467 aaPredicted RBP9.68□□□□□ -0.86
NLK-201ENST00000407008 MAP4K1Q92918 833 aa9.68□□□□□ -0.86
NLK-201ENST00000407008 LSG1Q9H089 658 aaKnown RBP9.68□□□□□ -0.86
NLK-201ENST00000407008 BSDC1Q9NW68 430 aaPredicted RBP9.68□□□□□ -0.86
NLK-201ENST00000407008 MAST3O60307 1309 aa9.67□□□□□ -0.86
NLK-201ENST00000407008 A0A0D9SFI3 127 aa9.67□□□□□ -0.86
NLK-201ENST00000407008 FIBPO43427 364 aa9.67□□□□□ -0.86
NLK-201ENST00000407008 UFL1O94874 794 aa9.67□□□□□ -0.86
NLK-201ENST00000407008 ERFEQ4G0M1 354 aa9.67□□□□□ -0.86
NLK-201ENST00000407008 ZNF444Q8N0Y2 327 aaPredicted RBP9.67□□□□□ -0.86
NLK-201ENST00000407008 CTCFLQ8NI51 663 aaPredicted RBP9.67□□□□□ -0.86
NLK-201ENST00000407008 STRCQ7RTU9 1775 aa9.67□□□□□ -0.86
NLK-201ENST00000407008 BBOX1O75936 387 aa9.67□□□□□ -0.86
NLK-201ENST00000407008 MBD4O95243 580 aa9.67□□□□□ -0.86
NLK-201ENST00000407008 GJB2P29033 226 aa9.67□□□□□ -0.86
NLK-201ENST00000407008 CATIPQ7Z7H3 387 aa9.67□□□□□ -0.86
NLK-201ENST00000407008 NUP133Q8WUM0 1156 aa9.67□□□□□ -0.86
NLK-201ENST00000407008 IQSEC3Q9UPP2 1182 aaPredicted RBP9.67□□□□□ -0.86
NLK-201ENST00000407008 GOLGA8AA7E2F4 631 aa9.67□□□□□ -0.86
NLK-201ENST00000407008 RBM5P52756 815 aaKnown RBP eCLIP9.67□□□□□ -0.86
NLK-201ENST00000407008 ITPK1Q13572 414 aa9.67□□□□□ -0.86
NLK-201ENST00000407008 RAB3GAP1Q15042 981 aa9.67□□□□□ -0.86
NLK-201ENST00000407008 STK38Q15208 465 aa9.67□□□□□ -0.86
NLK-201ENST00000407008 Q6ZUG5 572 aa9.67□□□□□ -0.86
NLK-201ENST00000407008 TMEM87BQ96K49 555 aa9.67□□□□□ -0.86
NLK-201ENST00000407008 XDHP47989 1333 aa9.67□□□□□ -0.86
NLK-201ENST00000407008 RANBP6O60518 1105 aaKnown RBP9.66□□□□□ -0.86
NLK-201ENST00000407008 SERPINB2P05120 415 aa9.66□□□□□ -0.86
NLK-201ENST00000407008 POLD1P28340 1107 aa9.66□□□□□ -0.86
NLK-201ENST00000407008 FAM182BQ5T319 152 aa9.66□□□□□ -0.86
NLK-201ENST00000407008 RASSF8Q8NHQ8 419 aa9.66□□□□□ -0.86
NLK-201ENST00000407008 ZSCAN16Q9H4T2 348 aaPredicted RBP9.66□□□□□ -0.86
NLK-201ENST00000407008 NHSL1Q5SYE7 1610 aa9.66□□□□□ -0.86
NLK-201ENST00000407008 H0YIN7 160 aa9.66□□□□□ -0.86
NLK-201ENST00000407008 PRC1O43663 620 aa9.66□□□□□ -0.86
NLK-201ENST00000407008 RFX5P48382 616 aaPredicted RBP9.66□□□□□ -0.86
NLK-201ENST00000407008 MRE11P49959 708 aa9.66□□□□□ -0.86
NLK-201ENST00000407008 SUPT20HQ8NEM7 779 aa9.66□□□□□ -0.86
NLK-201ENST00000407008 C8orf76Q96K31 380 aa9.66□□□□□ -0.86
NLK-201ENST00000407008 ZNF532Q9HCE3 1301 aa9.66□□□□□ -0.86
NLK-201ENST00000407008 PDE6AP16499 860 aa9.66□□□□□ -0.86
NLK-201ENST00000407008 KIF5BP33176 963 aa9.66□□□□□ -0.86
NLK-201ENST00000407008 METAP2P50579 478 aaKnown RBP eCLIP9.66□□□□□ -0.86
NLK-201ENST00000407008 WTAPQ15007 396 aa9.66□□□□□ -0.86
NLK-201ENST00000407008 SF3B3Q15393 1217 aaKnown RBP9.66□□□□□ -0.86
NLK-201ENST00000407008 LLPHQ9BRT6 129 aaKnown RBP9.66□□□□□ -0.86
NLK-201ENST00000407008 NOL7Q9UMY1 257 aaKnown RBP9.66□□□□□ -0.86
NLK-201ENST00000407008 KLF18A0A0U1RQI7 1052 aa9.66□□□□□ -0.86
NLK-201ENST00000407008 BAG4O95429 457 aaKnown RBP9.66□□□□□ -0.86
NLK-201ENST00000407008 HLA-DOAP06340 250 aa9.66□□□□□ -0.86
NLK-201ENST00000407008 FOSBP53539 338 aa9.66□□□□□ -0.86
NLK-201ENST00000407008 INTS5Q6P9B9 1019 aaKnown RBP9.66□□□□□ -0.86
NLK-201ENST00000407008 ZNF804BA4D1E1 1349 aa9.65□□□□□ -0.86
NLK-201ENST00000407008 RTL9Q8NET4 1388 aa9.65□□□□□ -0.86
NLK-201ENST00000407008 ZBTB43O43298 467 aa9.65□□□□□ -0.86
NLK-201ENST00000407008 MARCH6O60337 910 aa9.65□□□□□ -0.86
NLK-201ENST00000407008 ZSCAN22P10073 491 aaPredicted RBP9.65□□□□□ -0.86
NLK-201ENST00000407008 ADORA1P30542 326 aa9.65□□□□□ -0.86
NLK-201ENST00000407008 PHKA1P46020 1223 aa9.65□□□□□ -0.86
NLK-201ENST00000407008 ARHGEF1Q92888 912 aaKnown RBP9.65□□□□□ -0.86
NLK-201ENST00000407008 EDC3Q96F86 508 aaKnown RBP9.65□□□□□ -0.86
NLK-201ENST00000407008 SPATA32Q96LK8 384 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms