RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 RAB11FIP4Q86YS3 637 aa16.77■□□□□ 0.27
PRAME-205ENST00000405655 STK11IPQ8N1F8 1099 aa16.77■□□□□ 0.27
PRAME-205ENST00000405655 MAGEB6Q8N7X4 407 aa16.77■□□□□ 0.27
PRAME-205ENST00000405655 TCRBV5S4A2TA0A5A2 114 aa16.76■□□□□ 0.27
PRAME-205ENST00000405655 DDX11L8A8MPP1 907 aa16.76■□□□□ 0.27
PRAME-205ENST00000405655 SMIM22K7EJ46 135 aa16.76■□□□□ 0.27
PRAME-205ENST00000405655 PSMA5P28066 241 aa16.76■□□□□ 0.27
PRAME-205ENST00000405655 TM4SF1P30408 202 aa16.76■□□□□ 0.27
PRAME-205ENST00000405655 TSGA10IPQ3SY00 556 aa16.76■□□□□ 0.27
PRAME-205ENST00000405655 APPBP2Q92624 585 aa16.76■□□□□ 0.27
PRAME-205ENST00000405655 DSCC1Q9BVC3 393 aa16.76■□□□□ 0.27
PRAME-205ENST00000405655 UBR3Q6ZT12 1888 aa16.76■□□□□ 0.27
PRAME-205ENST00000405655 PRKAB2O43741 272 aa16.75■□□□□ 0.27
PRAME-205ENST00000405655 SYT1P21579 422 aa16.75■□□□□ 0.27
PRAME-205ENST00000405655 APOBRQ0VD83 1088 aa16.75■□□□□ 0.27
PRAME-205ENST00000405655 TXNRD3Q86VQ6 643 aa16.75■□□□□ 0.27
PRAME-205ENST00000405655 BRF1Q92994 677 aa16.75■□□□□ 0.27
PRAME-205ENST00000405655 NBPF3Q9H094 633 aa16.75■□□□□ 0.27
PRAME-205ENST00000405655 LMBRD1Q9NUN5 540 aa16.75■□□□□ 0.27
PRAME-205ENST00000405655 SMC3Q9UQE7 1217 aa16.75■□□□□ 0.27
PRAME-205ENST00000405655 COL1A1P02452 1464 aaPredicted RBP16.75■□□□□ 0.27
PRAME-205ENST00000405655 COL24A1Q17RW2 1714 aa16.75■□□□□ 0.27
PRAME-205ENST00000405655 JAK2O60674 1132 aa16.75■□□□□ 0.27
PRAME-205ENST00000405655 SLC10A5Q5PT55 438 aa16.75■□□□□ 0.27
PRAME-205ENST00000405655 ADGRA1Q86SQ6 560 aa16.75■□□□□ 0.27
PRAME-205ENST00000405655 MIGA1Q8NAN2 632 aa16.75■□□□□ 0.27
PRAME-205ENST00000405655 NLRP3Q96P20 1036 aa16.75■□□□□ 0.27
PRAME-205ENST00000405655 CDC5LQ99459 802 aaKnown RBP16.75■□□□□ 0.27
PRAME-205ENST00000405655 FOSBP53539 338 aa16.74■□□□□ 0.27
PRAME-205ENST00000405655 RTL9Q8NET4 1388 aa16.74■□□□□ 0.27
PRAME-205ENST00000405655 ARMT1Q9H993 441 aa16.74■□□□□ 0.27
PRAME-205ENST00000405655 NCLP19338 710 aaKnown RBP16.74■□□□□ 0.27
PRAME-205ENST00000405655 TPTE2Q6XPS3 522 aa16.74■□□□□ 0.27
PRAME-205ENST00000405655 BSDC1Q9NW68 430 aaPredicted RBP16.74■□□□□ 0.27
PRAME-205ENST00000405655 RBM27Q9P2N5 1060 aaKnown RBP16.74■□□□□ 0.27
PRAME-205ENST00000405655 NAP1L2Q9ULW6 460 aaPredicted RBP16.74■□□□□ 0.27
PRAME-205ENST00000405655 APPP05067 770 aa16.73■□□□□ 0.27
PRAME-205ENST00000405655 HSP90B1P14625 803 aaKnown RBP16.73■□□□□ 0.27
PRAME-205ENST00000405655 RPS8P62241 208 aaKnown RBP16.73■□□□□ 0.27
PRAME-205ENST00000405655 ZNF512BQ96KM6 892 aaPredicted RBP16.73■□□□□ 0.27
PRAME-205ENST00000405655 NCOA5Q9HCD5 579 aaKnown RBP16.73■□□□□ 0.27
PRAME-205ENST00000405655 ABCF2Q9UG63 623 aa16.73■□□□□ 0.27
PRAME-205ENST00000405655 TACC3Q9Y6A5 838 aa16.73■□□□□ 0.27
PRAME-205ENST00000405655 UQCRFS1P1P0C7P4 283 aa16.72■□□□□ 0.27
PRAME-205ENST00000405655 GYS1P13807 737 aa16.72■□□□□ 0.27
PRAME-205ENST00000405655 CCT2P78371 535 aaKnown RBP16.72■□□□□ 0.27
PRAME-205ENST00000405655 FAM173BQ6P4H8 233 aa16.72■□□□□ 0.27
PRAME-205ENST00000405655 CLEC17AQ6ZS10 378 aa16.72■□□□□ 0.27
PRAME-205ENST00000405655 FAM84BQ96KN1 310 aaPredicted RBP16.72■□□□□ 0.27
PRAME-205ENST00000405655 CARMIL3Q8ND23 1372 aa16.72■□□□□ 0.27
PRAME-205ENST00000405655 MBD4O95243 580 aa16.72■□□□□ 0.27
PRAME-205ENST00000405655 FERMT3Q86UX7 667 aa16.72■□□□□ 0.27
PRAME-205ENST00000405655 GPT2Q8TD30 523 aa16.72■□□□□ 0.27
PRAME-205ENST00000405655 DDX11Q96FC9 970 aa16.72■□□□□ 0.27
PRAME-205ENST00000405655 DOCK2Q92608 1830 aa16.71■□□□□ 0.27
PRAME-205ENST00000405655 GADD45BO75293 160 aaPredicted RBP16.71■□□□□ 0.27
PRAME-205ENST00000405655 ZNF827Q17R98 1081 aa16.71■□□□□ 0.27
PRAME-205ENST00000405655 TBC1D10CQ8IV04 446 aa16.71■□□□□ 0.27
PRAME-205ENST00000405655 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.71■□□□□ 0.271e-17■□□□□ 9.1
PRAME-205ENST00000405655 DDX49Q9Y6V7 483 aaKnown RBP16.71■□□□□ 0.27
PRAME-205ENST00000405655 STX6O43752 255 aa16.71■□□□□ 0.27
PRAME-205ENST00000405655 ZFYP08048 801 aaPredicted RBP16.71■□□□□ 0.27
PRAME-205ENST00000405655 FGD1P98174 961 aa16.71■□□□□ 0.27
PRAME-205ENST00000405655 EXOSC10Q01780 885 aaKnown RBP16.71■□□□□ 0.27
PRAME-205ENST00000405655 TXNRD1Q16881 649 aa16.71■□□□□ 0.27
PRAME-205ENST00000405655 PRR5LQ6MZQ0 368 aa16.71■□□□□ 0.27
PRAME-205ENST00000405655 LCORLQ8N3X6 602 aa16.71■□□□□ 0.27
PRAME-205ENST00000405655 NYXQ9GZU5 481 aa16.71■□□□□ 0.27
PRAME-205ENST00000405655 EPB41L4AQ9HCS5 686 aaPredicted RBP16.71■□□□□ 0.27
PRAME-205ENST00000405655 VPS37CA5D8V6 355 aaPredicted RBP16.7■□□□□ 0.26
PRAME-205ENST00000405655 GAS2L3Q86XJ1 694 aa16.7■□□□□ 0.26
PRAME-205ENST00000405655 ZNF384Q8TF68 577 aa16.7■□□□□ 0.26
PRAME-205ENST00000405655 SENP2Q9HC62 589 aa16.7■□□□□ 0.26
PRAME-205ENST00000405655 CNPY2Q9Y2B0 182 aa16.7■□□□□ 0.26
PRAME-205ENST00000405655 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.7■□□□□ 0.26
PRAME-205ENST00000405655 MYH13Q9UKX3 1938 aa16.7■□□□□ 0.26
PRAME-205ENST00000405655 ANTXR2P58335 489 aa16.7■□□□□ 0.26
PRAME-205ENST00000405655 EVX2Q03828 476 aa16.7■□□□□ 0.26
PRAME-205ENST00000405655 CTDSPL2Q05D32 466 aa16.7■□□□□ 0.26
PRAME-205ENST00000405655 DDR1Q08345 913 aa16.7■□□□□ 0.26
PRAME-205ENST00000405655 SCRN1Q12765 414 aa16.7■□□□□ 0.26
PRAME-205ENST00000405655 KRT32Q14532 448 aa16.7■□□□□ 0.26
PRAME-205ENST00000405655 DHX32Q7L7V1 743 aaKnown RBP16.7■□□□□ 0.26
PRAME-205ENST00000405655 CNBD1Q8NA66 436 aa16.7■□□□□ 0.26
PRAME-205ENST00000405655 ZSCAN31Q96LW9 406 aaPredicted RBP16.7■□□□□ 0.26
PRAME-205ENST00000405655 STRBPQ96SI9 672 aaKnown RBP16.7■□□□□ 0.26
PRAME-205ENST00000405655 LRP2BPQ9P2M1 347 aa16.7■□□□□ 0.26
PRAME-205ENST00000405655 TTF1Q15361 905 aaPredicted RBP16.69■□□□□ 0.26
PRAME-205ENST00000405655 SH2B1Q9NRF2 756 aaPredicted RBP16.69■□□□□ 0.26
PRAME-205ENST00000405655 MTMR6Q9Y217 621 aa16.69■□□□□ 0.26
PRAME-205ENST00000405655 ZSCAN22P10073 491 aaPredicted RBP16.68■□□□□ 0.26
PRAME-205ENST00000405655 UBE3CQ15386 1083 aa16.68■□□□□ 0.26
PRAME-205ENST00000405655 CDC37L1Q7L3B6 337 aa16.68■□□□□ 0.26
PRAME-205ENST00000405655 AIDAQ96BJ3 306 aa16.68■□□□□ 0.26
PRAME-205ENST00000405655 TAOK2Q9UL54 1235 aa16.68■□□□□ 0.26
PRAME-205ENST00000405655 BRPF3Q9ULD4 1205 aa16.68■□□□□ 0.26
PRAME-205ENST00000405655 DYNLL1P63167 89 aaKnown RBP16.68■□□□□ 0.26
PRAME-205ENST00000405655 CHAF1AQ13111 956 aaPredicted RBP16.68■□□□□ 0.26
PRAME-205ENST00000405655 CAVIN1Q6NZI2 390 aaKnown RBP16.68■□□□□ 0.26
PRAME-205ENST00000405655 VPS37DQ86XT2 251 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms