RNA–Protein interactions for RNA: ENST00000405053.7

PDE4D-206, Transcript of phosphodiesterase 4D, humanhuman

TSL 5

Gene PDE4D, Length 512 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-206ENST00000405053 CHD4Q14839 1912 aa13.17□□□□□ -0.3
PDE4D-206ENST00000405053 SBF1O95248 1867 aa13.16□□□□□ -0.3
PDE4D-206ENST00000405053 SALL1Q9NSC2 1324 aa13.16□□□□□ -0.3
PDE4D-206ENST00000405053 YDJCA8MPS7 323 aa13.16□□□□□ -0.3
PDE4D-206ENST00000405053 G3V3G9 751 aa13.16□□□□□ -0.3
PDE4D-206ENST00000405053 GSPT1P15170 499 aaKnown RBP13.16□□□□□ -0.3
PDE4D-206ENST00000405053 ZAP70P43403 619 aa13.16□□□□□ -0.3
PDE4D-206ENST00000405053 BMP2KLQ5H9B9 411 aa13.16□□□□□ -0.3
PDE4D-206ENST00000405053 DCAF8Q5TAQ9 597 aa13.16□□□□□ -0.3
PDE4D-206ENST00000405053 PI16Q6UXB8 463 aa13.16□□□□□ -0.3
PDE4D-206ENST00000405053 NIM1KQ8IY84 436 aa13.16□□□□□ -0.3
PDE4D-206ENST00000405053 JDP2Q8WYK2 163 aa13.16□□□□□ -0.3
PDE4D-206ENST00000405053 ZNRF3Q9ULT6 936 aa13.16□□□□□ -0.3
PDE4D-206ENST00000405053 IQSEC3Q9UPP2 1182 aaPredicted RBP13.16□□□□□ -0.3
PDE4D-206ENST00000405053 DICER1Q9UPY3 1922 aaKnown RBP13.15□□□□□ -0.3
PDE4D-206ENST00000405053 SCN9AQ15858 1988 aa13.15□□□□□ -0.3
PDE4D-206ENST00000405053 FZD9O00144 591 aa13.15□□□□□ -0.3
PDE4D-206ENST00000405053 IGSF3O75054 1194 aa13.15□□□□□ -0.3
PDE4D-206ENST00000405053 FRAT2O75474 233 aaPredicted RBP13.15□□□□□ -0.3
PDE4D-206ENST00000405053 CYP2E1P05181 493 aaPredicted RBP13.15□□□□□ -0.3
PDE4D-206ENST00000405053 FKBP1AP62942 108 aaKnown RBP13.15□□□□□ -0.3
PDE4D-206ENST00000405053 STRIP1Q5VSL9 837 aa13.15□□□□□ -0.3
PDE4D-206ENST00000405053 TICAM2Q86XR7 235 aa13.15□□□□□ -0.3
PDE4D-206ENST00000405053 WDR66Q8TBY9 1149 aa13.15□□□□□ -0.3
PDE4D-206ENST00000405053 SNRKQ9NRH2 765 aa13.15□□□□□ -0.3
PDE4D-206ENST00000405053 PAG1Q9NWQ8 432 aa13.15□□□□□ -0.3
PDE4D-206ENST00000405053 ZNF646O15015 1829 aaPredicted RBP13.14□□□□□ -0.31
PDE4D-206ENST00000405053 PSME4Q14997 1843 aa13.14□□□□□ -0.31
PDE4D-206ENST00000405053 MYH13Q9UKX3 1938 aa13.14□□□□□ -0.31
PDE4D-206ENST00000405053 USP17L3A6NCW0 530 aa13.14□□□□□ -0.31
PDE4D-206ENST00000405053 USP17L4A6NCW7 530 aa13.14□□□□□ -0.31
PDE4D-206ENST00000405053 GTF2IP78347 998 aa13.14□□□□□ -0.31
PDE4D-206ENST00000405053 TTF1Q15361 905 aaPredicted RBP13.14□□□□□ -0.31
PDE4D-206ENST00000405053 DACT2Q5SW24 774 aa13.14□□□□□ -0.31
PDE4D-206ENST00000405053 TTLL5Q6EMB2 1281 aa13.14□□□□□ -0.31
PDE4D-206ENST00000405053 USP17L1Q7RTZ2 530 aa13.14□□□□□ -0.31
PDE4D-206ENST00000405053 ZGPATQ8N5A5 531 aaKnown RBP13.14□□□□□ -0.31
PDE4D-206ENST00000405053 TBC1D22AQ8WUA7 517 aa13.14□□□□□ -0.31
PDE4D-206ENST00000405053 EVI5LQ96CN4 794 aa13.14□□□□□ -0.31
PDE4D-206ENST00000405053 DNAJC2Q99543 621 aaKnown RBP13.14□□□□□ -0.31
PDE4D-206ENST00000405053 KCNQ5Q9NR82 932 aa13.14□□□□□ -0.31
PDE4D-206ENST00000405053 NDUFB9Q9Y6M9 179 aa13.14□□□□□ -0.31
PDE4D-206ENST00000405053 CCDC88AQ3V6T2 1871 aa13.13□□□□□ -0.31
PDE4D-206ENST00000405053 GOLIM4O00461 696 aa13.13□□□□□ -0.31
PDE4D-206ENST00000405053 VIL1P09327 827 aaKnown RBP13.13□□□□□ -0.31
PDE4D-206ENST00000405053 SDSP20132 328 aa13.13□□□□□ -0.31
PDE4D-206ENST00000405053 CHAF1AQ13111 956 aaPredicted RBP13.13□□□□□ -0.31
PDE4D-206ENST00000405053 CNTROBQ8N137 903 aa13.13□□□□□ -0.31
PDE4D-206ENST00000405053 KBTBD3Q8NAB2 608 aa13.13□□□□□ -0.31
PDE4D-206ENST00000405053 EDC3Q96F86 508 aaKnown RBP13.13□□□□□ -0.31
PDE4D-206ENST00000405053 ANTXR1Q9H6X2 564 aa13.13□□□□□ -0.31
PDE4D-206ENST00000405053 SUGT1Q9Y2Z0 365 aa13.13□□□□□ -0.31
PDE4D-206ENST00000405053 ZC3H4Q9UPT8 1303 aaKnown RBP13.13□□□□□ -0.31
PDE4D-206ENST00000405053 RFX7Q2KHR2 1363 aa13.12□□□□□ -0.31
PDE4D-206ENST00000405053 CXCL9Q07325 125 aa13.12□□□□□ -0.31
PDE4D-206ENST00000405053 MFSD14BQ5SR56 506 aa13.12□□□□□ -0.31
PDE4D-206ENST00000405053 C9orf131Q5VYM1 1079 aa13.12□□□□□ -0.31
PDE4D-206ENST00000405053 TMED8Q6PL24 325 aaPredicted RBP13.12□□□□□ -0.31
PDE4D-206ENST00000405053 PIH1D3Q9NQM4 214 aaKnown RBP13.12□□□□□ -0.31
PDE4D-206ENST00000405053 RNF181Q9P0P0 153 aa13.12□□□□□ -0.31
PDE4D-206ENST00000405053 DOCK2Q92608 1830 aa13.11□□□□□ -0.31
PDE4D-206ENST00000405053 PSMD14O00487 310 aa13.11□□□□□ -0.31
PDE4D-206ENST00000405053 MAP4K4O95819 1239 aaPredicted RBP13.11□□□□□ -0.31
PDE4D-206ENST00000405053 TNIP1Q15025 636 aa13.11□□□□□ -0.31
PDE4D-206ENST00000405053 SPTY2D1Q68D10 685 aaPredicted RBP13.11□□□□□ -0.31
PDE4D-206ENST00000405053 CIAPIN1Q6FI81 312 aa13.11□□□□□ -0.31
PDE4D-206ENST00000405053 TBC1D9Q6ZT07 1266 aa13.11□□□□□ -0.31
PDE4D-206ENST00000405053 CERS5Q8N5B7 392 aa13.11□□□□□ -0.31
PDE4D-206ENST00000405053 GMLQ99445 158 aa13.11□□□□□ -0.31
PDE4D-206ENST00000405053 JAG2Q9Y219 1238 aa13.11□□□□□ -0.31
PDE4D-206ENST00000405053 MYO3BQ8WXR4 1341 aa13.11□□□□□ -0.31
PDE4D-206ENST00000405053 DCAF8L1A6NGE4 600 aa13.1□□□□□ -0.31
PDE4D-206ENST00000405053 TRIM6-TRIM34B2RNG4 842 aa13.1□□□□□ -0.31
PDE4D-206ENST00000405053 RAD17O75943 681 aa13.1□□□□□ -0.31
PDE4D-206ENST00000405053 EIF6P56537 245 aaKnown RBP13.1□□□□□ -0.31
PDE4D-206ENST00000405053 RSBN1LQ6PCB5 846 aaPredicted RBP13.1□□□□□ -0.31
PDE4D-206ENST00000405053 AGBL3Q8NEM8 1001 aa13.1□□□□□ -0.31
PDE4D-206ENST00000405053 ABCF2Q9UG63 623 aa13.1□□□□□ -0.31
PDE4D-206ENST00000405053 LDHBP07195 334 aaKnown RBP13.09□□□□□ -0.31
PDE4D-206ENST00000405053 RPS12P25398 132 aaKnown RBP13.09□□□□□ -0.31
PDE4D-206ENST00000405053 PRDX5P30044 214 aa13.09□□□□□ -0.31
PDE4D-206ENST00000405053 MMP14P50281 582 aa13.09□□□□□ -0.31
PDE4D-206ENST00000405053 MAP3K12Q12852 859 aa13.09□□□□□ -0.31
PDE4D-206ENST00000405053 GRIK5Q16478 980 aa13.09□□□□□ -0.31
PDE4D-206ENST00000405053 LRRFIP1Q32MZ4 808 aaKnown RBP13.09□□□□□ -0.31
PDE4D-206ENST00000405053 ERICH6Q7L0X2 663 aa13.09□□□□□ -0.31
PDE4D-206ENST00000405053 TIAM2Q8IVF5 1701 aa13.09□□□□□ -0.31
PDE4D-206ENST00000405053 ZNF384Q8TF68 577 aa13.09□□□□□ -0.31
PDE4D-206ENST00000405053 RILPL2Q969X0 211 aa13.09□□□□□ -0.31
PDE4D-206ENST00000405053 NSUN4Q96CB9 384 aaKnown RBP13.09□□□□□ -0.31
PDE4D-206ENST00000405053 FSD1Q9BTV5 496 aa13.09□□□□□ -0.31
PDE4D-206ENST00000405053 MRIQ9BWK5 157 aa13.09□□□□□ -0.31
PDE4D-206ENST00000405053 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.09□□□□□ -0.31
PDE4D-206ENST00000405053 LRP2BPQ9P2M1 347 aa13.09□□□□□ -0.31
PDE4D-206ENST00000405053 ZNF541Q9H0D2 1346 aa13.09□□□□□ -0.31
PDE4D-206ENST00000405053 IDH1O75874 414 aaKnown RBP13.08□□□□□ -0.32
PDE4D-206ENST00000405053 ZFYP08048 801 aaPredicted RBP13.08□□□□□ -0.32
PDE4D-206ENST00000405053 ADD2P35612 726 aa13.08□□□□□ -0.32
PDE4D-206ENST00000405053 UBE3CQ15386 1083 aa13.08□□□□□ -0.32
PDE4D-206ENST00000405053 ZSCAN25Q6NSZ9 544 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms