RNA–Protein interactions for RNA: ENST00000402412.5

R3HDM2-204, Transcript of R3H domain containing 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HDM2, Length 4,372 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-204ENST00000402412 ADGRL3Q9HAR2 1447 aa15.76■□□□□ 0.11
R3HDM2-204ENST00000402412 KCNQ3O43525 872 aa15.75■□□□□ 0.11
R3HDM2-204ENST00000402412 RBM25P49756 843 aaKnown RBP15.75■□□□□ 0.11
R3HDM2-204ENST00000402412 STX1AQ16623 288 aa15.75■□□□□ 0.11
R3HDM2-204ENST00000402412 MCMDC2Q4G0Z9 681 aa15.75■□□□□ 0.11
R3HDM2-204ENST00000402412 WTAPQ15007 396 aa15.75■□□□□ 0.11
R3HDM2-204ENST00000402412 TYRO3Q06418 890 aa15.75■□□□□ 0.11
R3HDM2-204ENST00000402412 RAB3GAP1Q15042 981 aa15.75■□□□□ 0.11
R3HDM2-204ENST00000402412 CEP135Q66GS9 1140 aa15.75■□□□□ 0.11
R3HDM2-204ENST00000402412 CEP131Q9UPN4 1083 aa15.75■□□□□ 0.11
R3HDM2-204ENST00000402412 NIP7Q9Y221 180 aaKnown RBP eCLIP15.75■□□□□ 0.11
R3HDM2-204ENST00000402412 ZCRB1Q8TBF4 217 aaKnown RBP15.75■□□□□ 0.11
R3HDM2-204ENST00000402412 STAMQ92783 540 aa15.75■□□□□ 0.11
R3HDM2-204ENST00000402412 NSFL1CQ9UNZ2 370 aaKnown RBP15.75■□□□□ 0.11
R3HDM2-204ENST00000402412 LINS1Q8NG48 757 aa15.74■□□□□ 0.11
R3HDM2-204ENST00000402412 LZTFL1Q9NQ48 299 aa15.74■□□□□ 0.11
R3HDM2-204ENST00000402412 ZNF652Q9Y2D9 606 aa15.74■□□□□ 0.11
R3HDM2-204ENST00000402412 KIAA0754O94854 1291 aa15.74■□□□□ 0.11
R3HDM2-204ENST00000402412 NBPF6Q5VWK0 638 aa15.74■□□□□ 0.11
R3HDM2-204ENST00000402412 NBPF5PQ86XG9 351 aaPredicted RBP15.74■□□□□ 0.11
R3HDM2-204ENST00000402412 NBPF4Q96M43 638 aa15.74■□□□□ 0.11
R3HDM2-204ENST00000402412 LUC7LQ9NQ29 371 aaKnown RBP15.74■□□□□ 0.11
R3HDM2-204ENST00000402412 RDXP35241 583 aaKnown RBP15.74■□□□□ 0.11
R3HDM2-204ENST00000402412 CCDC191Q8NCU4 936 aa15.74■□□□□ 0.11
R3HDM2-204ENST00000402412 RPGRQ92834 1020 aaKnown RBP15.74■□□□□ 0.11
R3HDM2-204ENST00000402412 PAG1Q9NWQ8 432 aa15.74■□□□□ 0.11
R3HDM2-204ENST00000402412 ZSCAN12O43309 604 aa15.73■□□□□ 0.11
R3HDM2-204ENST00000402412 EIF3JO75822 258 aaKnown RBP15.73■□□□□ 0.11
R3HDM2-204ENST00000402412 SEPT7Q16181 437 aaKnown RBP15.73■□□□□ 0.11
R3HDM2-204ENST00000402412 TTC16Q8NEE8 873 aa15.73■□□□□ 0.11
R3HDM2-204ENST00000402412 SAMM50Q9Y512 469 aa15.73■□□□□ 0.11
R3HDM2-204ENST00000402412 LMAN1P49257 510 aa15.73■□□□□ 0.11
R3HDM2-204ENST00000402412 CCDC40Q4G0X9 1142 aa15.73■□□□□ 0.11
R3HDM2-204ENST00000402412 RRAGBQ5VZM2 374 aa15.73■□□□□ 0.11
R3HDM2-204ENST00000402412 FAM200AQ8TCP9 573 aa15.73■□□□□ 0.11
R3HDM2-204ENST00000402412 TRIM47Q96LD4 638 aa15.73■□□□□ 0.11
R3HDM2-204ENST00000402412 MSH6P52701 1360 aa15.73■□□□□ 0.11
R3HDM2-204ENST00000402412 PTPDC1A2A3K4 754 aa15.73■□□□□ 0.11
R3HDM2-204ENST00000402412 AKR1B10O60218 316 aa15.73■□□□□ 0.11
R3HDM2-204ENST00000402412 IL13P35225 146 aa15.73■□□□□ 0.11
R3HDM2-204ENST00000402412 ATP6V1AP38606 617 aa15.73■□□□□ 0.11
R3HDM2-204ENST00000402412 CLCN1P35523 988 aa15.73■□□□□ 0.11
R3HDM2-204ENST00000402412 AKNAD1Q5T1N1 836 aa15.73■□□□□ 0.11
R3HDM2-204ENST00000402412 HEATR3Q7Z4Q2 680 aa15.73■□□□□ 0.11
R3HDM2-204ENST00000402412 ADGRB2O60241 1585 aa15.72■□□□□ 0.11
R3HDM2-204ENST00000402412 IL16Q14005 1332 aa15.72■□□□□ 0.11
R3HDM2-204ENST00000402412 DNAJC21Q5F1R6 531 aaKnown RBP15.72■□□□□ 0.11
R3HDM2-204ENST00000402412 IFNKQ9P0W0 207 aa15.72■□□□□ 0.11
R3HDM2-204ENST00000402412 TRIM21P19474 475 aaKnown RBP15.72■□□□□ 0.11
R3HDM2-204ENST00000402412 KAT14Q9H8E8 782 aa15.72■□□□□ 0.11
R3HDM2-204ENST00000402412 ZKSCAN5Q9Y2L8 839 aa15.72■□□□□ 0.11
R3HDM2-204ENST00000402412 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.72■□□□□ 0.11
R3HDM2-204ENST00000402412 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.72■□□□□ 0.112e-6■■□□□ 12.5
R3HDM2-204ENST00000402412 JAK2O60674 1132 aa15.71■□□□□ 0.11
R3HDM2-204ENST00000402412 MRPS27Q92552 414 aaKnown RBP15.71■□□□□ 0.11
R3HDM2-204ENST00000402412 FEZ1Q99689 392 aa15.71■□□□□ 0.11
R3HDM2-204ENST00000402412 TCP11L1Q9NUJ3 509 aa15.71■□□□□ 0.11
R3HDM2-204ENST00000402412 GSTTP1A0A1W2PQM5 241 aa15.71■□□□□ 0.11
R3HDM2-204ENST00000402412 TAF5LO75529 589 aa15.71■□□□□ 0.11
R3HDM2-204ENST00000402412 ZNF397Q8NF99 534 aaPredicted RBP15.71■□□□□ 0.11
R3HDM2-204ENST00000402412 IPO4Q8TEX9 1081 aaKnown RBP15.71■□□□□ 0.11
R3HDM2-204ENST00000402412 TMOD2Q9NZR1 351 aa15.71■□□□□ 0.11
R3HDM2-204ENST00000402412 TMEM94Q12767 1356 aa15.71■□□□□ 0.11
R3HDM2-204ENST00000402412 ZNF142P52746 1687 aaPredicted RBP15.71■□□□□ 0.11
R3HDM2-204ENST00000402412 MAGEB6Q8N7X4 407 aa15.71■□□□□ 0.11
R3HDM2-204ENST00000402412 CCDC148Q8NFR7 591 aa15.71■□□□□ 0.11
R3HDM2-204ENST00000402412 PUF60Q9UHX1 559 aaKnown RBP15.71■□□□□ 0.11
R3HDM2-204ENST00000402412 ZNF521Q96K83 1311 aa15.71■□□□□ 0.1
R3HDM2-204ENST00000402412 FLT4P35916 1363 aa15.71■□□□□ 0.1
R3HDM2-204ENST00000402412 B4E1Z4 1266 aa15.71■□□□□ 0.1
R3HDM2-204ENST00000402412 ERLIN2O94905 339 aa15.71■□□□□ 0.1
R3HDM2-204ENST00000402412 SF3B2Q13435 895 aaKnown RBP15.71■□□□□ 0.1
R3HDM2-204ENST00000402412 RNF41Q9H4P4 317 aaPredicted RBP15.71■□□□□ 0.1
R3HDM2-204ENST00000402412 SPTLC2O15270 562 aa15.7■□□□□ 0.1
R3HDM2-204ENST00000402412 EIF6P56537 245 aaKnown RBP15.7■□□□□ 0.1
R3HDM2-204ENST00000402412 RTN1Q16799 776 aa15.7■□□□□ 0.1
R3HDM2-204ENST00000402412 EEF2KMTQ96G04 330 aa15.7■□□□□ 0.1
R3HDM2-204ENST00000402412 PNPLA6Q8IY17 1366 aa15.7■□□□□ 0.1
R3HDM2-204ENST00000402412 RIMBP2O15034 1052 aa15.7■□□□□ 0.1
R3HDM2-204ENST00000402412 CAPZA3Q96KX2 299 aa15.7■□□□□ 0.1
R3HDM2-204ENST00000402412 ITSN1Q15811 1721 aa15.7■□□□□ 0.1
R3HDM2-204ENST00000402412 A0A087WWV3 80 aa15.69■□□□□ 0.1
R3HDM2-204ENST00000402412 SF3A3Q12874 501 aaKnown RBP eCLIP15.69■□□□□ 0.1
R3HDM2-204ENST00000402412 IFIT1BQ5T764 474 aaKnown RBP15.69■□□□□ 0.1
R3HDM2-204ENST00000402412 SEC62Q99442 399 aaKnown RBP15.69■□□□□ 0.1
R3HDM2-204ENST00000402412 RABEP2Q9H5N1 569 aa15.69■□□□□ 0.1
R3HDM2-204ENST00000402412 CTAGE5O15320 804 aa15.69■□□□□ 0.1
R3HDM2-204ENST00000402412 DYDC1Q8WWB3 177 aa15.69■□□□□ 0.1
R3HDM2-204ENST00000402412 PALD1Q9ULE6 856 aa15.69■□□□□ 0.1
R3HDM2-204ENST00000402412 CDK12Q9NYV4 1490 aaPredicted RBP15.69■□□□□ 0.1
R3HDM2-204ENST00000402412 SYT10Q6XYQ8 523 aa15.69■□□□□ 0.1
R3HDM2-204ENST00000402412 CMTR1Q8N1G2 835 aaKnown RBP15.69■□□□□ 0.1
R3HDM2-204ENST00000402412 RGS22Q8NE09 1264 aa15.69■□□□□ 0.1
R3HDM2-204ENST00000402412 SCLT1Q96NL6 688 aa15.69■□□□□ 0.1
R3HDM2-204ENST00000402412 SOS1Q07889 1333 aaPredicted RBP15.69■□□□□ 0.1
R3HDM2-204ENST00000402412 SP4Q02446 784 aa15.68■□□□□ 0.1
R3HDM2-204ENST00000402412 RNF187Q5TA31 235 aaPredicted RBP15.68■□□□□ 0.1
R3HDM2-204ENST00000402412 YEATS4O95619 227 aa15.68■□□□□ 0.1
R3HDM2-204ENST00000402412 U2AF2P26368 475 aaKnown RBP eCLIP15.68■□□□□ 0.11e-6■■■□□ 17.3
R3HDM2-204ENST00000402412 MCM7P33993 719 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms