RNA–Protein interactions for RNA: ENST00000402394.5

CGREF1-203, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene CGREF1, Length 1,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-203ENST00000402394 CCDC173Q0VFZ6 552 aa31.2■■■□□ 2.59
CGREF1-203ENST00000402394 PPP1R9BQ96SB3 815 aa31.2■■■□□ 2.59
CGREF1-203ENST00000402394 IGHMBP2P38935 993 aaKnown RBP31.2■■■□□ 2.58
CGREF1-203ENST00000402394 ZNF274Q96GC6 653 aaPredicted RBP31.2■■■□□ 2.58
CGREF1-203ENST00000402394 KRT85P78386 507 aa31.19■■■□□ 2.58
CGREF1-203ENST00000402394 FERMT3Q86UX7 667 aa31.19■■■□□ 2.58
CGREF1-203ENST00000402394 ANP32BQ92688 251 aaKnown RBP31.19■■■□□ 2.58
CGREF1-203ENST00000402394 CNTNAP4Q9C0A0 1308 aa31.19■■■□□ 2.58
CGREF1-203ENST00000402394 RGL2O15211 777 aa31.18■■■□□ 2.58
CGREF1-203ENST00000402394 IDH1O75874 414 aaKnown RBP31.18■■■□□ 2.58
CGREF1-203ENST00000402394 EVCP57679 992 aa31.18■■■□□ 2.58
CGREF1-203ENST00000402394 CCDC183Q5T5S1 534 aa31.18■■■□□ 2.58
CGREF1-203ENST00000402394 PDE6AP16499 860 aa31.18■■■□□ 2.58
CGREF1-203ENST00000402394 HAND2P61296 217 aa31.18■■■□□ 2.58
CGREF1-203ENST00000402394 SPATA5Q8NB90 893 aa31.18■■■□□ 2.58
CGREF1-203ENST00000402394 NSUN7Q8NE18 718 aaKnown RBP31.18■■■□□ 2.58
CGREF1-203ENST00000402394 MYO5AQ9Y4I1 1855 aaKnown RBP31.17■■■□□ 2.58
CGREF1-203ENST00000402394 TCRBV5S4A2TA0A5A2 114 aa31.17■■■□□ 2.58
CGREF1-203ENST00000402394 ELP1O95163 1332 aa31.17■■■□□ 2.58
CGREF1-203ENST00000402394 ZNF532Q9HCE3 1301 aa31.17■■■□□ 2.58
CGREF1-203ENST00000402394 CTDNEP1O95476 244 aa31.16■■■□□ 2.58
CGREF1-203ENST00000402394 PDIA3P30101 505 aaKnown RBP31.16■■■□□ 2.58
CGREF1-203ENST00000402394 HMGN5P82970 282 aaKnown RBP31.16■■■□□ 2.58
CGREF1-203ENST00000402394 RASGRF1Q13972 1273 aa31.16■■■□□ 2.58
CGREF1-203ENST00000402394 MB21D2Q8IYB1 491 aaPredicted RBP31.16■■■□□ 2.58
CGREF1-203ENST00000402394 CHMP4CQ96CF2 233 aa31.16■■■□□ 2.58
CGREF1-203ENST00000402394 ZNF213O14771 459 aa31.15■■■□□ 2.58
CGREF1-203ENST00000402394 CHST3Q7LGC8 479 aa31.15■■■□□ 2.58
CGREF1-203ENST00000402394 TSPY26PQ9H489 355 aa31.15■■■□□ 2.58
CGREF1-203ENST00000402394 WWC3Q9ULE0 1092 aa31.15■■■□□ 2.58
CGREF1-203ENST00000402394 USP21Q9UK80 565 aa31.14■■■□□ 2.58
CGREF1-203ENST00000402394 DOCK2Q92608 1830 aa31.14■■■□□ 2.58
CGREF1-203ENST00000402394 SNAP23O00161 211 aa31.14■■■□□ 2.57
CGREF1-203ENST00000402394 LETM1O95202 739 aaPredicted RBP31.14■■■□□ 2.57
CGREF1-203ENST00000402394 MEX3CQ5U5Q3 659 aaKnown RBP31.14■■■□□ 2.57
CGREF1-203ENST00000402394 FAM184AQ8NB25 1140 aa31.14■■■□□ 2.57
CGREF1-203ENST00000402394 NCOA7Q8NI08 942 aa31.14■■■□□ 2.57
CGREF1-203ENST00000402394 DDX11Q96FC9 970 aa31.14■■■□□ 2.57
CGREF1-203ENST00000402394 WDR19Q8NEZ3 1342 aa31.13■■■□□ 2.57
CGREF1-203ENST00000402394 MCM5P33992 734 aa31.13■■■□□ 2.57
CGREF1-203ENST00000402394 TTC6Q86TZ1 520 aa31.13■■■□□ 2.57
CGREF1-203ENST00000402394 KLHL34Q8N239 644 aa31.13■■■□□ 2.57
CGREF1-203ENST00000402394 SALL1Q9NSC2 1324 aa31.13■■■□□ 2.57
CGREF1-203ENST00000402394 SCN7AQ01118 1682 aa31.13■■■□□ 2.57
CGREF1-203ENST00000402394 PTPDC1A2A3K4 754 aa31.12■■■□□ 2.57
CGREF1-203ENST00000402394 RESTQ13127 1097 aa31.12■■■□□ 2.57
CGREF1-203ENST00000402394 FAM173BQ6P4H8 233 aa31.12■■■□□ 2.57
CGREF1-203ENST00000402394 CDC5LQ99459 802 aaKnown RBP31.12■■■□□ 2.57
CGREF1-203ENST00000402394 SCAND2PQ9GZW5 306 aaPredicted RBP31.12■■■□□ 2.57
CGREF1-203ENST00000402394 CHRNDQ07001 517 aa31.12■■■□□ 2.57
CGREF1-203ENST00000402394 KIF3AQ9Y496 699 aa31.12■■■□□ 2.57
CGREF1-203ENST00000402394 PRC1O43663 620 aa31.11■■■□□ 2.57
CGREF1-203ENST00000402394 SF3B3Q15393 1217 aaKnown RBP31.11■■■□□ 2.57
CGREF1-203ENST00000402394 ERFEQ4G0M1 354 aa31.11■■■□□ 2.57
CGREF1-203ENST00000402394 NAA16Q6N069 864 aaPredicted RBP31.11■■■□□ 2.57
CGREF1-203ENST00000402394 THSD7AQ9UPZ6 1657 aa31.11■■■□□ 2.57
CGREF1-203ENST00000402394 H3BQV1 296 aa31.1■■■□□ 2.57
CGREF1-203ENST00000402394 CCT2P78371 535 aaKnown RBP31.1■■■□□ 2.57
CGREF1-203ENST00000402394 MAP3K12Q12852 859 aa31.1■■■□□ 2.57
CGREF1-203ENST00000402394 RC3H1Q5TC82 1133 aaKnown RBP31.1■■■□□ 2.57
CGREF1-203ENST00000402394 IFFO2Q5TF58 517 aa31.1■■■□□ 2.57
CGREF1-203ENST00000402394 PTF1AQ7RTS3 328 aa31.1■■■□□ 2.57
CGREF1-203ENST00000402394 NBPF3Q9H094 633 aa31.1■■■□□ 2.57
CGREF1-203ENST00000402394 ZSCAN16Q9H4T2 348 aaPredicted RBP31.1■■■□□ 2.57
CGREF1-203ENST00000402394 RRAGDQ9NQL2 400 aaPredicted RBP31.1■■■□□ 2.57
CGREF1-203ENST00000402394 COL4A1P02462 1669 aa31.1■■■□□ 2.57
CGREF1-203ENST00000402394 KCNQ4P56696 695 aa31.1■■■□□ 2.57
CGREF1-203ENST00000402394 RALYLQ86SE5 291 aaKnown RBP31.1■■■□□ 2.57
CGREF1-203ENST00000402394 STRBPQ96SI9 672 aaKnown RBP31.1■■■□□ 2.57
CGREF1-203ENST00000402394 ANTXR2P58335 489 aa31.09■■■□□ 2.57
CGREF1-203ENST00000402394 TRIM44Q96DX7 344 aaPredicted RBP31.09■■■□□ 2.57
CGREF1-203ENST00000402394 NCOA5Q9HCD5 579 aaKnown RBP31.09■■■□□ 2.57
CGREF1-203ENST00000402394 ALX1Q15699 326 aa31.08■■■□□ 2.57
CGREF1-203ENST00000402394 GPHNQ9NQX3 736 aaPredicted RBP31.08■■■□□ 2.57
CGREF1-203ENST00000402394 ZMYM6O95789 1325 aa31.08■■■□□ 2.57
CGREF1-203ENST00000402394 BCAMP50895 628 aa31.08■■■□□ 2.57
CGREF1-203ENST00000402394 AIDAQ96BJ3 306 aa31.08■■■□□ 2.57
CGREF1-203ENST00000402394 BTAF1O14981 1849 aa31.07■■■□□ 2.56
CGREF1-203ENST00000402394 NHSQ6T4R5 1651 aa31.07■■■□□ 2.56
CGREF1-203ENST00000402394 BCL2L12Q9HB09 334 aa31.07■■■□□ 2.56
CGREF1-203ENST00000402394 NAP1L2Q9ULW6 460 aaPredicted RBP31.07■■■□□ 2.56
CGREF1-203ENST00000402394 C3orf67Q6ZVT6 689 aa31.06■■■□□ 2.56
CGREF1-203ENST00000402394 MAGEB6Q8N7X4 407 aa31.06■■■□□ 2.56
CGREF1-203ENST00000402394 PDLIM2Q96JY6 352 aa31.06■■■□□ 2.56
CGREF1-203ENST00000402394 SLC10A5Q5PT55 438 aa31.06■■■□□ 2.56
CGREF1-203ENST00000402394 TBC1D10CQ8IV04 446 aa31.06■■■□□ 2.56
CGREF1-203ENST00000402394 ANKRD18AQ8IVF6 992 aa31.06■■■□□ 2.56
CGREF1-203ENST00000402394 LEO1Q8WVC0 666 aaPredicted RBP31.06■■■□□ 2.56
CGREF1-203ENST00000402394 RPS6KA4O75676 772 aa31.05■■■□□ 2.56
CGREF1-203ENST00000402394 APPP05067 770 aa31.05■■■□□ 2.56
CGREF1-203ENST00000402394 TPRNQ4KMQ1 711 aa31.05■■■□□ 2.56
CGREF1-203ENST00000402394 SPATA32Q96LK8 384 aa31.05■■■□□ 2.56
CGREF1-203ENST00000402394 NARFQ9UHQ1 456 aa31.05■■■□□ 2.56
CGREF1-203ENST00000402394 TBC1D9BQ66K14 1250 aa31.04■■■□□ 2.56
CGREF1-203ENST00000402394 TFIP11Q9UBB9 837 aaKnown RBP31.04■■■□□ 2.56
CGREF1-203ENST00000402394 A0A1B0GUL6 1792 aa31.04■■■□□ 2.56
CGREF1-203ENST00000402394 TRDNQ13061 729 aa31.04■■■□□ 2.56
CGREF1-203ENST00000402394 BSDC1Q9NW68 430 aaPredicted RBP31.04■■■□□ 2.56
CGREF1-203ENST00000402394 CASZ1Q86V15 1759 aa31.03■■■□□ 2.56
CGREF1-203ENST00000402394 HPS5Q9UPZ3 1129 aa31.03■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms