RNA–Protein interactions for RNA: ENST00000401498.6

PKDCC-202, Transcript of protein kinase domain containing, cytoplasmic, humanhuman

TSL 5

Gene PKDCC, Length 1,550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKDCC-202ENST00000401498 RPS12P25398 132 aaKnown RBP37.01■■■■□ 3.52
PKDCC-202ENST00000401498 AACSQ86V21 672 aa37.01■■■■□ 3.52
PKDCC-202ENST00000401498 CLASRPQ8N2M8 674 aaKnown RBP37.01■■■■□ 3.52
PKDCC-202ENST00000401498 GNL3LQ9NVN8 582 aaKnown RBP37.01■■■■□ 3.52
PKDCC-202ENST00000401498 GPRC5DQ9NZD1 345 aa37.01■■■■□ 3.52
PKDCC-202ENST00000401498 EPS15P42566 896 aa37■■■■□ 3.51
PKDCC-202ENST00000401498 GORABQ5T7V8 394 aa37■■■■□ 3.51
PKDCC-202ENST00000401498 AGBL3Q8NEM8 1001 aa37■■■■□ 3.51
PKDCC-202ENST00000401498 IQCA1LA6NCM1 817 aa37■■■■□ 3.51
PKDCC-202ENST00000401498 SMARCA5O60264 1052 aaPredicted RBP37■■■■□ 3.51
PKDCC-202ENST00000401498 IGHDP01880 384 aa37■■■■□ 3.51
PKDCC-202ENST00000401498 CERS5Q8N5B7 392 aa37■■■■□ 3.51
PKDCC-202ENST00000401498 RWDD1Q9H446 243 aaPredicted RBP37■■■■□ 3.51
PKDCC-202ENST00000401498 HACL1Q9UJ83 578 aa37■■■■□ 3.51
PKDCC-202ENST00000401498 COL1A1P02452 1464 aaPredicted RBP36.99■■■■□ 3.51
PKDCC-202ENST00000401498 SHTN1A0MZ66 631 aa36.98■■■■□ 3.51
PKDCC-202ENST00000401498 KIF3CO14782 793 aa36.98■■■■□ 3.51
PKDCC-202ENST00000401498 LMOD1P29536 600 aaPredicted RBP36.98■■■■□ 3.51
PKDCC-202ENST00000401498 CHAF1AQ13111 956 aaPredicted RBP36.98■■■■□ 3.51
PKDCC-202ENST00000401498 BCL11AQ9H165 835 aa36.98■■■■□ 3.51
PKDCC-202ENST00000401498 CNOT7Q9UIV1 285 aaKnown RBP36.98■■■■□ 3.51
PKDCC-202ENST00000401498 ZBTB22O15209 634 aa36.97■■■■□ 3.51
PKDCC-202ENST00000401498 TAF1DQ9H5J8 278 aaPredicted RBP36.96■■■■□ 3.51
PKDCC-202ENST00000401498 MYO3BQ8WXR4 1341 aa36.96■■■■□ 3.51
PKDCC-202ENST00000401498 SEMA3EO15041 775 aa36.95■■■■□ 3.51
PKDCC-202ENST00000401498 FKBP1AP62942 108 aaKnown RBP36.95■■■■□ 3.51
PKDCC-202ENST00000401498 MICALL2Q8IY33 904 aa36.95■■■■□ 3.51
PKDCC-202ENST00000401498 GCC1Q96CN9 775 aa36.95■■■■□ 3.51
PKDCC-202ENST00000401498 RASGRF1Q13972 1273 aa36.95■■■■□ 3.51
PKDCC-202ENST00000401498 ARID4AP29374 1257 aaPredicted RBP36.94■■■■□ 3.5
PKDCC-202ENST00000401498 EPHX2P34913 555 aa36.94■■■■□ 3.5
PKDCC-202ENST00000401498 MFSD14BQ5SR56 506 aa36.94■■■■□ 3.5
PKDCC-202ENST00000401498 DENND2AQ9ULE3 1009 aa36.94■■■■□ 3.5
PKDCC-202ENST00000401498 CCDC158Q5M9N0 1113 aa36.93■■■■□ 3.5
PKDCC-202ENST00000401498 IFIT2P09913 472 aaKnown RBP36.91■■■■□ 3.5
PKDCC-202ENST00000401498 USP17L8P0C7I0 530 aa36.91■■■■□ 3.5
PKDCC-202ENST00000401498 TTC39AQ5SRH9 613 aa36.91■■■■□ 3.5
PKDCC-202ENST00000401498 KIAA0825Q8IV33 1275 aa36.91■■■■□ 3.5
PKDCC-202ENST00000401498 H7C1D1 291 aa36.91■■■■□ 3.5
PKDCC-202ENST00000401498 UQCRFS1P1P0C7P4 283 aa36.91■■■■□ 3.5
PKDCC-202ENST00000401498 SCARF1Q14162 830 aa36.91■■■■□ 3.5
PKDCC-202ENST00000401498 SMC5Q8IY18 1101 aa36.91■■■■□ 3.5
PKDCC-202ENST00000401498 TBC1D22AQ8WUA7 517 aa36.91■■■■□ 3.5
PKDCC-202ENST00000401498 ADARB2Q9NS39 739 aaKnown RBP36.91■■■■□ 3.5
PKDCC-202ENST00000401498 AKAP11Q9UKA4 1901 aa36.91■■■■□ 3.5
PKDCC-202ENST00000401498 ZNF280AP59817 542 aaPredicted RBP36.9■■■■□ 3.5
PKDCC-202ENST00000401498 HMG20BQ9P0W2 317 aa36.9■■■■□ 3.5
PKDCC-202ENST00000401498 MCAMP43121 646 aa36.89■■■■□ 3.5
PKDCC-202ENST00000401498 GRIK5Q16478 980 aa36.89■■■■□ 3.5
PKDCC-202ENST00000401498 WDR66Q8TBY9 1149 aa36.89■■■■□ 3.5
PKDCC-202ENST00000401498 ZNF512BQ96KM6 892 aaPredicted RBP36.89■■■■□ 3.5
PKDCC-202ENST00000401498 PDS5AQ29RF7 1337 aaKnown RBP36.88■■■■□ 3.5
PKDCC-202ENST00000401498 PI16Q6UXB8 463 aa36.88■■■■□ 3.49
PKDCC-202ENST00000401498 EGFRP00533 1210 aa36.87■■■■□ 3.49
PKDCC-202ENST00000401498 SAMD7Q7Z3H4 446 aa36.87■■■■□ 3.49
PKDCC-202ENST00000401498 SPATA5Q8NB90 893 aa36.87■■■■□ 3.49
PKDCC-202ENST00000401498 ANKRD45Q5TZF3 282 aa36.87■■■■□ 3.49
PKDCC-202ENST00000401498 F8W031 263 aaPredicted RBP36.86■■■■□ 3.49
PKDCC-202ENST00000401498 NEFLP07196 543 aa36.86■■■■□ 3.49
PKDCC-202ENST00000401498 POTEIP0CG38 1075 aa36.86■■■■□ 3.49
PKDCC-202ENST00000401498 POTEJP0CG39 1038 aa36.86■■■■□ 3.49
PKDCC-202ENST00000401498 PNMA8AQ86V59 439 aaPredicted RBP36.86■■■■□ 3.49
PKDCC-202ENST00000401498 TRPM4Q8TD43 1214 aa36.86■■■■□ 3.49
PKDCC-202ENST00000401498 USP50Q70EL3 339 aaPredicted RBP36.85■■■■□ 3.49
PKDCC-202ENST00000401498 OGFOD1Q8N543 542 aa36.85■■■■□ 3.49
PKDCC-202ENST00000401498 SALL1Q9NSC2 1324 aa36.85■■■■□ 3.49
PKDCC-202ENST00000401498 HIRAP54198 1017 aaPredicted RBP36.84■■■■□ 3.49
PKDCC-202ENST00000401498 TBC1D10BQ4KMP7 808 aaPredicted RBP36.84■■■■□ 3.49
PKDCC-202ENST00000401498 EAPPQ56P03 285 aaPredicted RBP36.84■■■■□ 3.49
PKDCC-202ENST00000401498 RBM26Q5T8P6 1007 aaKnown RBP36.83■■■■□ 3.49
PKDCC-202ENST00000401498 C16orf71Q8IYS4 520 aaPredicted RBP36.83■■■■□ 3.49
PKDCC-202ENST00000401498 MYOZ2Q9NPC6 264 aa36.83■■■■□ 3.49
PKDCC-202ENST00000401498 SNRKQ9NRH2 765 aa36.83■■■■□ 3.49
PKDCC-202ENST00000401498 ADAMTSL1Q8N6G6 1762 aa36.83■■■■□ 3.49
PKDCC-202ENST00000401498 TTF2Q9UNY4 1162 aaKnown RBP36.83■■■■□ 3.49
PKDCC-202ENST00000401498 MMP14P50281 582 aa36.82■■■■□ 3.48
PKDCC-202ENST00000401498 HDAC9Q9UKV0 1011 aa36.82■■■■□ 3.48
PKDCC-202ENST00000401498 B4GALNT3Q6L9W6 998 aa36.81■■■■□ 3.48
PKDCC-202ENST00000401498 SUGT1Q9Y2Z0 365 aa36.81■■■■□ 3.48
PKDCC-202ENST00000401498 TOMM70O94826 608 aa36.79■■■■□ 3.48
PKDCC-202ENST00000401498 PRDX5P30044 214 aa36.79■■■■□ 3.48
PKDCC-202ENST00000401498 KIF4BQ2VIQ3 1234 aa36.79■■■■□ 3.48
PKDCC-202ENST00000401498 TBC1D9Q6ZT07 1266 aa36.78■■■■□ 3.48
PKDCC-202ENST00000401498 ZBTB47Q9UFB7 747 aaPredicted RBP36.78■■■■□ 3.48
PKDCC-202ENST00000401498 ABCF2Q9UG63 623 aa36.78■■■■□ 3.48
PKDCC-202ENST00000401498 ZAP70P43403 619 aa36.78■■■■□ 3.48
PKDCC-202ENST00000401498 ZGPATQ8N5A5 531 aaKnown RBP36.78■■■■□ 3.48
PKDCC-202ENST00000401498 OTUD7AQ8TE49 926 aaPredicted RBP36.78■■■■□ 3.48
PKDCC-202ENST00000401498 CYP2E1P05181 493 aaPredicted RBP36.77■■■■□ 3.48
PKDCC-202ENST00000401498 LDHDQ86WU2 507 aa36.77■■■■□ 3.48
PKDCC-202ENST00000401498 NDUFB9Q9Y6M9 179 aa36.77■■■■□ 3.48
PKDCC-202ENST00000401498 LDHBP07195 334 aaKnown RBP36.76■■■■□ 3.48
PKDCC-202ENST00000401498 PPIL4Q8WUA2 492 aaKnown RBP eCLIP36.76■■■■□ 3.48
PKDCC-202ENST00000401498 CLEC11AQ9Y240 323 aa36.76■■■■□ 3.48
PKDCC-202ENST00000401498 ATP5JP18859 108 aa36.75■■■■□ 3.47
PKDCC-202ENST00000401498 NUCB1Q02818 461 aa36.75■■■■□ 3.47
PKDCC-202ENST00000401498 PCDHAC2Q9Y5I4 1007 aa36.75■■■■□ 3.47
PKDCC-202ENST00000401498 RBM46Q8TBY0 533 aaKnown RBP36.74■■■■□ 3.47
PKDCC-202ENST00000401498 ZBED3Q96IU2 234 aaPredicted RBP36.74■■■■□ 3.47
PKDCC-202ENST00000401498 LNPKQ9C0E8 428 aa36.74■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms