RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 PNMA8AQ86V59 439 aaPredicted RBP9.24□□□□□ -0.93
USP16-204ENST00000399976 PA2G4Q9UQ80 394 aaKnown RBP9.24□□□□□ -0.93
USP16-204ENST00000399976 ATP5JP18859 108 aa9.24□□□□□ -0.93
USP16-204ENST00000399976 CXCL9Q07325 125 aa9.24□□□□□ -0.93
USP16-204ENST00000399976 XAGE2Q96GT9 111 aa9.24□□□□□ -0.93
USP16-204ENST00000399976 CCDC85AQ96PX6 553 aaPredicted RBP9.24□□□□□ -0.93
USP16-204ENST00000399976 FKBP1CQ5VVH2 108 aa9.24□□□□□ -0.93
USP16-204ENST00000399976 OLFM4Q6UX06 510 aa9.24□□□□□ -0.93
USP16-204ENST00000399976 EXOC6Q8TAG9 804 aa9.24□□□□□ -0.93
USP16-204ENST00000399976 C1orf115Q9H7X2 142 aa9.24□□□□□ -0.93
USP16-204ENST00000399976 SERPINA10Q9UK55 444 aa9.24□□□□□ -0.93
USP16-204ENST00000399976 LAMA4Q16363 1823 aa9.23□□□□□ -0.93
USP16-204ENST00000399976 ZNF541Q9H0D2 1346 aa9.23□□□□□ -0.93
USP16-204ENST00000399976 NAV1Q8NEY1 1877 aa9.23□□□□□ -0.93
USP16-204ENST00000399976 TTF1Q15361 905 aaPredicted RBP9.23□□□□□ -0.93
USP16-204ENST00000399976 CCDC158Q5M9N0 1113 aa9.23□□□□□ -0.93
USP16-204ENST00000399976 CCDC102BQ68D86 513 aa9.23□□□□□ -0.93
USP16-204ENST00000399976 SLF2Q8IX21 1173 aa9.23□□□□□ -0.93
USP16-204ENST00000399976 KLHDC4Q8TBB5 520 aa9.23□□□□□ -0.93
USP16-204ENST00000399976 GPATCH3Q96I76 525 aa9.23□□□□□ -0.93
USP16-204ENST00000399976 GPRC5DQ9NZD1 345 aa9.23□□□□□ -0.93
USP16-204ENST00000399976 NUCB1Q02818 461 aa9.23□□□□□ -0.93
USP16-204ENST00000399976 HHIPL2Q6UWX4 724 aa9.23□□□□□ -0.93
USP16-204ENST00000399976 CENPQQ7L2Z9 268 aaPredicted RBP9.23□□□□□ -0.93
USP16-204ENST00000399976 RBM46Q8TBY0 533 aaKnown RBP9.23□□□□□ -0.93
USP16-204ENST00000399976 ADARB2Q9NS39 739 aaKnown RBP9.23□□□□□ -0.93
USP16-204ENST00000399976 PPP2R3BQ9Y5P8 575 aa9.23□□□□□ -0.93
USP16-204ENST00000399976 TAF5LO75529 589 aa9.22□□□□□ -0.93
USP16-204ENST00000399976 FSTL1Q12841 308 aa9.22□□□□□ -0.93
USP16-204ENST00000399976 HACL1Q9UJ83 578 aa9.22□□□□□ -0.93
USP16-204ENST00000399976 HDAC9Q9UKV0 1011 aa9.22□□□□□ -0.93
USP16-204ENST00000399976 GAKO14976 1311 aa9.22□□□□□ -0.93
USP16-204ENST00000399976 UNCXA6NJT0 531 aa9.22□□□□□ -0.93
USP16-204ENST00000399976 VEGFAP15692 232 aaPredicted RBP9.22□□□□□ -0.93
USP16-204ENST00000399976 TXNRD3Q86VQ6 643 aa9.22□□□□□ -0.93
USP16-204ENST00000399976 EAF2Q96CJ1 260 aaPredicted RBP9.22□□□□□ -0.93
USP16-204ENST00000399976 DBNLQ9UJU6 430 aaKnown RBP9.22□□□□□ -0.93
USP16-204ENST00000399976 PSMD14O00487 310 aa9.21□□□□□ -0.93
USP16-204ENST00000399976 SCNN1DP51172 638 aa9.21□□□□□ -0.93
USP16-204ENST00000399976 OS9Q13438 667 aaPredicted RBP9.21□□□□□ -0.93
USP16-204ENST00000399976 NEFLP07196 543 aa9.21□□□□□ -0.94
USP16-204ENST00000399976 LMOD1P29536 600 aaPredicted RBP9.21□□□□□ -0.94
USP16-204ENST00000399976 GSTO1P78417 241 aa9.21□□□□□ -0.94
USP16-204ENST00000399976 SIL1Q9H173 461 aa9.21□□□□□ -0.94
USP16-204ENST00000399976 POTECB2RU33 542 aa9.21□□□□□ -0.94
USP16-204ENST00000399976 G3V3G9 751 aa9.21□□□□□ -0.94
USP16-204ENST00000399976 ERC2O15083 957 aa9.21□□□□□ -0.94
USP16-204ENST00000399976 DCAF8Q5TAQ9 597 aa9.21□□□□□ -0.94
USP16-204ENST00000399976 TTLL5Q6EMB2 1281 aa9.21□□□□□ -0.94
USP16-204ENST00000399976 LDHDQ86WU2 507 aa9.21□□□□□ -0.94
USP16-204ENST00000399976 HAUS7Q99871 368 aa9.21□□□□□ -0.94
USP16-204ENST00000399976 EXOC6BQ9Y2D4 811 aa9.21□□□□□ -0.94
USP16-204ENST00000399976 KLRK1P26718 216 aa9.2□□□□□ -0.94
USP16-204ENST00000399976 LRRFIP1Q32MZ4 808 aaKnown RBP9.2□□□□□ -0.94
USP16-204ENST00000399976 VPS37DQ86XT2 251 aa9.2□□□□□ -0.94
USP16-204ENST00000399976 SPATA5Q8NB90 893 aa9.2□□□□□ -0.94
USP16-204ENST00000399976 ECHDC1Q9NTX5 307 aa9.2□□□□□ -0.94
USP16-204ENST00000399976 IFIT2P09913 472 aaKnown RBP9.2□□□□□ -0.94
USP16-204ENST00000399976 YY1P25490 414 aa9.2□□□□□ -0.94
USP16-204ENST00000399976 HELBQ8NG08 1087 aaPredicted RBP9.2□□□□□ -0.94
USP16-204ENST00000399976 ZDHHC15Q96MV8 337 aa9.2□□□□□ -0.94
USP16-204ENST00000399976 TAF1DQ9H5J8 278 aaPredicted RBP9.2□□□□□ -0.94
USP16-204ENST00000399976 DBNDD1Q9H9R9 158 aa9.2□□□□□ -0.94
USP16-204ENST00000399976 H7C1D1 291 aa9.19□□□□□ -0.94
USP16-204ENST00000399976 PHKA1P46020 1223 aa9.19□□□□□ -0.94
USP16-204ENST00000399976 GYG1P46976 350 aa9.19□□□□□ -0.94
USP16-204ENST00000399976 AACSQ86V21 672 aa9.19□□□□□ -0.94
USP16-204ENST00000399976 ZNF219Q9P2Y4 722 aaPredicted RBP9.19□□□□□ -0.94
USP16-204ENST00000399976 MYH1P12882 1939 aa9.19□□□□□ -0.94
USP16-204ENST00000399976 SIPA1L1O43166 1804 aa9.19□□□□□ -0.94
USP16-204ENST00000399976 GLRX3O76003 335 aaKnown RBP9.19□□□□□ -0.94
USP16-204ENST00000399976 USP17L8P0C7I0 530 aa9.19□□□□□ -0.94
USP16-204ENST00000399976 GMPSP49915 693 aaPredicted RBP9.19□□□□□ -0.94
USP16-204ENST00000399976 RASGRF1Q13972 1273 aa9.19□□□□□ -0.94
USP16-204ENST00000399976 TTC39AQ5SRH9 613 aa9.19□□□□□ -0.94
USP16-204ENST00000399976 CHD1LQ86WJ1 897 aa9.19□□□□□ -0.94
USP16-204ENST00000399976 HMG20BQ9P0W2 317 aa9.19□□□□□ -0.94
USP16-204ENST00000399976 KIF3CO14782 793 aa9.18□□□□□ -0.94
USP16-204ENST00000399976 RIMBP2O15034 1052 aa9.18□□□□□ -0.94
USP16-204ENST00000399976 LDHCP07864 332 aa9.18□□□□□ -0.94
USP16-204ENST00000399976 NT5C2P49902 561 aa9.18□□□□□ -0.94
USP16-204ENST00000399976 BCAMP50895 628 aa9.18□□□□□ -0.94
USP16-204ENST00000399976 PPP4CP60510 307 aa9.18□□□□□ -0.94
USP16-204ENST00000399976 ZSCAN25Q6NSZ9 544 aa9.18□□□□□ -0.94
USP16-204ENST00000399976 DBNDD2Q9BQY9 259 aa9.18□□□□□ -0.94
USP16-204ENST00000399976 ZFYP08048 801 aaPredicted RBP9.18□□□□□ -0.94
USP16-204ENST00000399976 ADORA1P30542 326 aa9.18□□□□□ -0.94
USP16-204ENST00000399976 MCAMP43121 646 aa9.18□□□□□ -0.94
USP16-204ENST00000399976 DOK7Q18PE1 504 aa9.18□□□□□ -0.94
USP16-204ENST00000399976 SLC51AQ86UW1 340 aa9.18□□□□□ -0.94
USP16-204ENST00000399976 APOBEC3FQ8IUX4 373 aaKnown RBP9.18□□□□□ -0.94
USP16-204ENST00000399976 OTOFQ9HC10 1997 aa9.18□□□□□ -0.94
USP16-204ENST00000399976 PPP4R2Q9NY27 417 aa9.18□□□□□ -0.94
USP16-204ENST00000399976 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.18□□□□□ -0.94
USP16-204ENST00000399976 PLCG2P16885 1265 aa9.18□□□□□ -0.94
USP16-204ENST00000399976 EPHX2P34913 555 aa9.18□□□□□ -0.94
USP16-204ENST00000399976 TIMM10P62072 90 aa9.18□□□□□ -0.94
USP16-204ENST00000399976 OGFOD1Q8N543 542 aa9.18□□□□□ -0.94
USP16-204ENST00000399976 CERS5Q8N5B7 392 aa9.18□□□□□ -0.94
USP16-204ENST00000399976 ZNF784Q8NCA9 323 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms