RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 PUM3Q15397 648 aaKnown RBP13.91□□□□□ -0.18
COL25A1-202ENST00000399127 BICDL1Q6ZP65 573 aa13.91□□□□□ -0.18
COL25A1-202ENST00000399127 APPBP2Q92624 585 aa13.91□□□□□ -0.18
COL25A1-202ENST00000399127 AKAP11Q9UKA4 1901 aa13.91□□□□□ -0.18
COL25A1-202ENST00000399127 TRIM37O94972 964 aa13.91□□□□□ -0.18
COL25A1-202ENST00000399127 NTSR2O95665 410 aa13.91□□□□□ -0.18
COL25A1-202ENST00000399127 CCT2P78371 535 aaKnown RBP13.91□□□□□ -0.18
COL25A1-202ENST00000399127 GPHNQ9NQX3 736 aaPredicted RBP13.91□□□□□ -0.18
COL25A1-202ENST00000399127 MYO5AQ9Y4I1 1855 aaKnown RBP13.91□□□□□ -0.18
COL25A1-202ENST00000399127 BTAF1O14981 1849 aa13.9□□□□□ -0.18
COL25A1-202ENST00000399127 HMGB1P09429 215 aaKnown RBP13.9□□□□□ -0.18
COL25A1-202ENST00000399127 ZNF772Q68DY9 489 aaPredicted RBP13.9□□□□□ -0.18
COL25A1-202ENST00000399127 LRSAM1Q6UWE0 723 aa13.9□□□□□ -0.18
COL25A1-202ENST00000399127 NCOA5Q9HCD5 579 aaKnown RBP13.9□□□□□ -0.18
COL25A1-202ENST00000399127 MROH5Q6ZUA9 1318 aa13.9□□□□□ -0.18
COL25A1-202ENST00000399127 PDCP20941 246 aa13.9□□□□□ -0.18
COL25A1-202ENST00000399127 EXOSC10Q01780 885 aaKnown RBP13.9□□□□□ -0.18
COL25A1-202ENST00000399127 FAM196AQ6ZSG2 479 aa13.9□□□□□ -0.18
COL25A1-202ENST00000399127 TMEM87AQ8NBN3 555 aa13.9□□□□□ -0.18
COL25A1-202ENST00000399127 RNF214Q8ND24 703 aa13.9□□□□□ -0.18
COL25A1-202ENST00000399127 LPIN2Q92539 896 aa13.9□□□□□ -0.18
COL25A1-202ENST00000399127 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.9□□□□□ -0.18
COL25A1-202ENST00000399127 WWC3Q9ULE0 1092 aa13.9□□□□□ -0.18
COL25A1-202ENST00000399127 PHF14O94880 888 aa13.89□□□□□ -0.19
COL25A1-202ENST00000399127 CCDC152Q4G0S7 254 aa13.89□□□□□ -0.19
COL25A1-202ENST00000399127 PARP10Q53GL7 1025 aa13.89□□□□□ -0.19
COL25A1-202ENST00000399127 TICAM2Q86XR7 235 aa13.89□□□□□ -0.19
COL25A1-202ENST00000399127 KLHL34Q8N239 644 aa13.89□□□□□ -0.19
COL25A1-202ENST00000399127 ZNF652Q9Y2D9 606 aa13.89□□□□□ -0.19
COL25A1-202ENST00000399127 CNTNAP4Q9C0A0 1308 aa13.89□□□□□ -0.19
COL25A1-202ENST00000399127 FGFR2P21802 821 aa13.89□□□□□ -0.19
COL25A1-202ENST00000399127 ADD2P35612 726 aa13.89□□□□□ -0.19
COL25A1-202ENST00000399127 IMMTQ16891 758 aaKnown RBP13.89□□□□□ -0.19
COL25A1-202ENST00000399127 PAXIP1Q6ZW49 1069 aaPredicted RBP13.89□□□□□ -0.19
COL25A1-202ENST00000399127 NHSQ6T4R5 1651 aa13.88□□□□□ -0.19
COL25A1-202ENST00000399127 ABCC12Q96J65 1359 aa13.88□□□□□ -0.19
COL25A1-202ENST00000399127 ZNF532Q9HCE3 1301 aa13.88□□□□□ -0.19
COL25A1-202ENST00000399127 APPP05067 770 aa13.88□□□□□ -0.19
COL25A1-202ENST00000399127 RBM6P78332 1123 aaKnown RBP13.88□□□□□ -0.19
COL25A1-202ENST00000399127 C3orf67Q6ZVT6 689 aa13.88□□□□□ -0.19
COL25A1-202ENST00000399127 AK7Q96M32 723 aa13.88□□□□□ -0.19
COL25A1-202ENST00000399127 TFIP11Q9UBB9 837 aaKnown RBP13.88□□□□□ -0.19
COL25A1-202ENST00000399127 SRP68Q9UHB9 627 aaKnown RBP13.88□□□□□ -0.19
COL25A1-202ENST00000399127 RTCBQ9Y3I0 505 aaKnown RBP13.88□□□□□ -0.19
COL25A1-202ENST00000399127 MYH7P12883 1935 aa13.88□□□□□ -0.19
COL25A1-202ENST00000399127 SLC5A1P13866 664 aa13.88□□□□□ -0.19
COL25A1-202ENST00000399127 UBE2HP62256 183 aa13.88□□□□□ -0.19
COL25A1-202ENST00000399127 RASGRF1Q13972 1273 aa13.88□□□□□ -0.19
COL25A1-202ENST00000399127 ERFEQ4G0M1 354 aa13.88□□□□□ -0.19
COL25A1-202ENST00000399127 SYAP1Q96A49 352 aaPredicted RBP13.88□□□□□ -0.19
COL25A1-202ENST00000399127 CTNNA3Q9UI47 895 aa13.88□□□□□ -0.19
COL25A1-202ENST00000399127 IQSEC3Q9UPP2 1182 aaPredicted RBP13.88□□□□□ -0.19
COL25A1-202ENST00000399127 COL4A1P02462 1669 aa13.87□□□□□ -0.19
COL25A1-202ENST00000399127 WTIPA6NIX2 430 aaPredicted RBP13.87□□□□□ -0.19
COL25A1-202ENST00000399127 PFKFB2O60825 505 aa13.87□□□□□ -0.19
COL25A1-202ENST00000399127 RPS6KA4O75676 772 aa13.87□□□□□ -0.19
COL25A1-202ENST00000399127 PDE6AP16499 860 aa13.87□□□□□ -0.19
COL25A1-202ENST00000399127 ARID4AP29374 1257 aaPredicted RBP13.87□□□□□ -0.19
COL25A1-202ENST00000399127 IGHMBP2P38935 993 aaKnown RBP13.87□□□□□ -0.19
COL25A1-202ENST00000399127 BCAMP50895 628 aa13.87□□□□□ -0.19
COL25A1-202ENST00000399127 RAB11FIP4Q86YS3 637 aa13.87□□□□□ -0.19
COL25A1-202ENST00000399127 SPATA5Q8NB90 893 aa13.87□□□□□ -0.19
COL25A1-202ENST00000399127 DENND2AQ9ULE3 1009 aa13.87□□□□□ -0.19
COL25A1-202ENST00000399127 DDX60Q8IY21 1712 aaKnown RBP13.87□□□□□ -0.19
COL25A1-202ENST00000399127 ZPR1O75312 459 aa13.87□□□□□ -0.19
COL25A1-202ENST00000399127 TTF1Q15361 905 aaPredicted RBP13.87□□□□□ -0.19
COL25A1-202ENST00000399127 RC3H1Q5TC82 1133 aaKnown RBP13.87□□□□□ -0.19
COL25A1-202ENST00000399127 FAM184AQ8NB25 1140 aa13.87□□□□□ -0.19
COL25A1-202ENST00000399127 ZNF512BQ96KM6 892 aaPredicted RBP13.87□□□□□ -0.19
COL25A1-202ENST00000399127 LRP5O75197 1615 aa13.86□□□□□ -0.19
COL25A1-202ENST00000399127 H3BQV1 296 aa13.86□□□□□ -0.19
COL25A1-202ENST00000399127 ZNF213O14771 459 aa13.86□□□□□ -0.19
COL25A1-202ENST00000399127 CTDNEP1O95476 244 aa13.86□□□□□ -0.19
COL25A1-202ENST00000399127 UQCRFS1P1P0C7P4 283 aa13.86□□□□□ -0.19
COL25A1-202ENST00000399127 IFFO2Q5TF58 517 aa13.86□□□□□ -0.19
COL25A1-202ENST00000399127 ZSCAN25Q6NSZ9 544 aa13.86□□□□□ -0.19
COL25A1-202ENST00000399127 TTC6Q86TZ1 520 aa13.86□□□□□ -0.19
COL25A1-202ENST00000399127 AMIGO3Q86WK7 504 aa13.86□□□□□ -0.19
COL25A1-202ENST00000399127 ANP32BQ92688 251 aaKnown RBP13.86□□□□□ -0.19
COL25A1-202ENST00000399127 ZHX1Q9UKY1 873 aaPredicted RBP13.86□□□□□ -0.19
COL25A1-202ENST00000399127 PDIA3P30101 505 aaKnown RBP13.86□□□□□ -0.19
COL25A1-202ENST00000399127 KRT85P78386 507 aa13.86□□□□□ -0.19
COL25A1-202ENST00000399127 CHRNDQ07001 517 aa13.86□□□□□ -0.19
COL25A1-202ENST00000399127 CCDC24Q8N4L8 307 aa13.86□□□□□ -0.19
COL25A1-202ENST00000399127 NSUN7Q8NE18 718 aaKnown RBP13.86□□□□□ -0.19
COL25A1-202ENST00000399127 LRRC4BQ9NT99 713 aa13.86□□□□□ -0.19
COL25A1-202ENST00000399127 COL5A3P25940 1745 aaPredicted RBP13.85□□□□□ -0.19
COL25A1-202ENST00000399127 RREB1Q92766 1687 aa13.85□□□□□ -0.19
COL25A1-202ENST00000399127 PTPDC1A2A3K4 754 aa13.85□□□□□ -0.19
COL25A1-202ENST00000399127 PRC1O43663 620 aa13.85□□□□□ -0.19
COL25A1-202ENST00000399127 MAGEB6Q8N7X4 407 aa13.85□□□□□ -0.19
COL25A1-202ENST00000399127 NKX2-3Q8TAU0 364 aa13.85□□□□□ -0.19
COL25A1-202ENST00000399127 TRIM44Q96DX7 344 aaPredicted RBP13.85□□□□□ -0.19
COL25A1-202ENST00000399127 AGXT2Q9BYV1 514 aa13.85□□□□□ -0.19
COL25A1-202ENST00000399127 TAF1P21675 1872 aa13.85□□□□□ -0.19
COL25A1-202ENST00000399127 TBC1D9BQ66K14 1250 aa13.85□□□□□ -0.19
COL25A1-202ENST00000399127 IPO4Q8TEX9 1081 aaKnown RBP13.85□□□□□ -0.19
COL25A1-202ENST00000399127 ARHGEF1Q92888 912 aaKnown RBP13.85□□□□□ -0.19
COL25A1-202ENST00000399127 NBPF3Q9H094 633 aa13.85□□□□□ -0.19
COL25A1-202ENST00000399127 RXRBP28702 533 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms