RNA–Protein interactions for RNA: ENST00000398989.2

TUBA4A-203, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-203ENST00000398989 FBXO33Q7Z6M2 555 aa17.35■□□□□ 0.37
TUBA4A-203ENST00000398989 USP48Q86UV5 1035 aa17.35■□□□□ 0.37
TUBA4A-203ENST00000398989 LPIN2Q92539 896 aa17.35■□□□□ 0.37
TUBA4A-203ENST00000398989 YTHDC1Q96MU7 727 aaKnown RBP17.35■□□□□ 0.37
TUBA4A-203ENST00000398989 C1orf115Q9H7X2 142 aa17.35■□□□□ 0.37
TUBA4A-203ENST00000398989 GGA3Q9NZ52 723 aa17.35■□□□□ 0.37
TUBA4A-203ENST00000398989 IQSEC3Q9UPP2 1182 aaPredicted RBP17.35■□□□□ 0.37
TUBA4A-203ENST00000398989 ASTN2O75129 1339 aaPredicted RBP17.35■□□□□ 0.37
TUBA4A-203ENST00000398989 PNMA6EA0A0J9YXQ4 647 aa17.34■□□□□ 0.37
TUBA4A-203ENST00000398989 ZBTB7BO15156 539 aaPredicted RBP17.34■□□□□ 0.37
TUBA4A-203ENST00000398989 MS4A1P11836 297 aa17.34■□□□□ 0.37
TUBA4A-203ENST00000398989 BCAMP50895 628 aa17.34■□□□□ 0.37
TUBA4A-203ENST00000398989 FAM205AQ6ZU69 1335 aa17.34■□□□□ 0.37
TUBA4A-203ENST00000398989 MKRN1Q9UHC7 482 aaKnown RBP17.34■□□□□ 0.37
TUBA4A-203ENST00000398989 HDAC9Q9UKV0 1011 aa17.34■□□□□ 0.37
TUBA4A-203ENST00000398989 F8W031 263 aaPredicted RBP17.33■□□□□ 0.36
TUBA4A-203ENST00000398989 FRAT2O75474 233 aaPredicted RBP17.33■□□□□ 0.36
TUBA4A-203ENST00000398989 MMP14P50281 582 aa17.33■□□□□ 0.36
TUBA4A-203ENST00000398989 ATP2B3Q16720 1220 aa17.33■□□□□ 0.36
TUBA4A-203ENST00000398989 NBPF9Q3BBW0 867 aa17.33■□□□□ 0.36
TUBA4A-203ENST00000398989 ANGEL2Q5VTE6 544 aaKnown RBP17.33■□□□□ 0.36
TUBA4A-203ENST00000398989 CST9Q5W186 159 aa17.33■□□□□ 0.36
TUBA4A-203ENST00000398989 ZNF408Q9H9D4 720 aa17.33■□□□□ 0.36
TUBA4A-203ENST00000398989 ABT1Q9ULW3 272 aaKnown RBP17.33■□□□□ 0.36
TUBA4A-203ENST00000398989 ADM5C9JUS6 153 aa17.32■□□□□ 0.36
TUBA4A-203ENST00000398989 CELF2O95319 508 aaKnown RBP17.32■□□□□ 0.36
TUBA4A-203ENST00000398989 FKBP1AP62942 108 aaKnown RBP17.32■□□□□ 0.36
TUBA4A-203ENST00000398989 MFSD14BQ5SR56 506 aa17.32■□□□□ 0.36
TUBA4A-203ENST00000398989 DLK2Q6UY11 383 aa17.32■□□□□ 0.36
TUBA4A-203ENST00000398989 SULF1Q8IWU6 871 aa17.32■□□□□ 0.36
TUBA4A-203ENST00000398989 ECM29Q5VYK3 1845 aa17.32■□□□□ 0.36
TUBA4A-203ENST00000398989 CNTNAP1P78357 1384 aa17.31■□□□□ 0.36
TUBA4A-203ENST00000398989 WNT10BO00744 389 aa17.31■□□□□ 0.36
TUBA4A-203ENST00000398989 CHAF1AQ13111 956 aaPredicted RBP17.31■□□□□ 0.36
TUBA4A-203ENST00000398989 ATP8B2P98198 1209 aa17.3■□□□□ 0.36
TUBA4A-203ENST00000398989 TFCP2Q12800 502 aa17.3■□□□□ 0.36
TUBA4A-203ENST00000398989 POLA2Q14181 598 aa17.3■□□□□ 0.36
TUBA4A-203ENST00000398989 MVPQ14764 893 aaKnown RBP17.3■□□□□ 0.36
TUBA4A-203ENST00000398989 COG6Q9Y2V7 657 aa17.3■□□□□ 0.36
TUBA4A-203ENST00000398989 PITPNM2Q9BZ72 1349 aa17.29■□□□□ 0.36
TUBA4A-203ENST00000398989 G3BP1Q13283 466 aaKnown RBP eCLIP17.29■□□□□ 0.36
TUBA4A-203ENST00000398989 DLGAP5Q15398 846 aa17.29■□□□□ 0.36
TUBA4A-203ENST00000398989 SSH3Q8TE77 659 aa17.29■□□□□ 0.36
TUBA4A-203ENST00000398989 SCAF8Q9UPN6 1271 aaKnown RBP17.29■□□□□ 0.36
TUBA4A-203ENST00000398989 RASSF10A6NK89 507 aa17.28■□□□□ 0.36
TUBA4A-203ENST00000398989 ADORA1P30542 326 aa17.28■□□□□ 0.36
TUBA4A-203ENST00000398989 RBM5P52756 815 aaKnown RBP eCLIP17.28■□□□□ 0.36
TUBA4A-203ENST00000398989 DEFB115Q30KQ5 88 aa17.28■□□□□ 0.36
TUBA4A-203ENST00000398989 CFAP100Q494V2 611 aa17.28■□□□□ 0.36
TUBA4A-203ENST00000398989 JMYQ8N9B5 988 aa17.28■□□□□ 0.36
TUBA4A-203ENST00000398989 TBC1D22AQ8WUA7 517 aa17.28■□□□□ 0.36
TUBA4A-203ENST00000398989 ZBED3Q96IU2 234 aaPredicted RBP17.28■□□□□ 0.36
TUBA4A-203ENST00000398989 TTF2Q9UNY4 1162 aaKnown RBP17.28■□□□□ 0.36
TUBA4A-203ENST00000398989 AKAP2Q9Y2D5 859 aa17.28■□□□□ 0.36
TUBA4A-203ENST00000398989 PCDHAC2Q9Y5I4 1007 aa17.28■□□□□ 0.36
TUBA4A-203ENST00000398989 VEGFBP49765 207 aa17.27■□□□□ 0.36
TUBA4A-203ENST00000398989 TIMM10P62072 90 aa17.27■□□□□ 0.36
TUBA4A-203ENST00000398989 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.27■□□□□ 0.36
TUBA4A-203ENST00000398989 CDCA5Q96FF9 252 aa17.27■□□□□ 0.36
TUBA4A-203ENST00000398989 GNL3LQ9NVN8 582 aaKnown RBP17.27■□□□□ 0.36
TUBA4A-203ENST00000398989 DDX19BQ9UMR2 479 aa17.27■□□□□ 0.36
TUBA4A-203ENST00000398989 TLL2Q9Y6L7 1015 aa17.27■□□□□ 0.36
TUBA4A-203ENST00000398989 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.27■□□□□ 0.36
TUBA4A-203ENST00000398989 COL1A1P02452 1464 aaPredicted RBP17.26■□□□□ 0.35
TUBA4A-203ENST00000398989 A0A1B0GUL7 405 aa17.26■□□□□ 0.35
TUBA4A-203ENST00000398989 PHKA1P46020 1223 aa17.26■□□□□ 0.35
TUBA4A-203ENST00000398989 OS9Q13438 667 aaPredicted RBP17.26■□□□□ 0.35
TUBA4A-203ENST00000398989 GRIK5Q16478 980 aa17.26■□□□□ 0.35
TUBA4A-203ENST00000398989 C20orf194Q5TEA3 1177 aa17.26■□□□□ 0.35
TUBA4A-203ENST00000398989 CEP85Q6P2H3 762 aa17.26■□□□□ 0.35
TUBA4A-203ENST00000398989 PAXIP1Q6ZW49 1069 aaPredicted RBP17.26■□□□□ 0.35
TUBA4A-203ENST00000398989 SAPCD2Q86UD0 394 aa17.26■□□□□ 0.35
TUBA4A-203ENST00000398989 MTMR14Q8NCE2 650 aa17.26■□□□□ 0.35
TUBA4A-203ENST00000398989 SPDYE2BA6NHP3 402 aa17.25■□□□□ 0.35
TUBA4A-203ENST00000398989 SURF6O75683 361 aaKnown RBP17.25■□□□□ 0.35
TUBA4A-203ENST00000398989 SPDYE6P0CI01 402 aa17.25■□□□□ 0.35
TUBA4A-203ENST00000398989 CCDC102BQ68D86 513 aa17.25■□□□□ 0.35
TUBA4A-203ENST00000398989 XAGE2Q96GT9 111 aa17.25■□□□□ 0.35
TUBA4A-203ENST00000398989 PRMT6Q96LA8 375 aaPredicted RBP17.25■□□□□ 0.35
TUBA4A-203ENST00000398989 NEUROD6Q96NK8 337 aa17.25■□□□□ 0.35
TUBA4A-203ENST00000398989 SERPINA10Q9UK55 444 aa17.25■□□□□ 0.35
TUBA4A-203ENST00000398989 MYO1BO43795 1136 aa17.24■□□□□ 0.35
TUBA4A-203ENST00000398989 GRM1Q13255 1194 aa17.24■□□□□ 0.35
TUBA4A-203ENST00000398989 PDE3AQ14432 1141 aa17.24■□□□□ 0.35
TUBA4A-203ENST00000398989 APOBEC3FQ8IUX4 373 aaKnown RBP17.24■□□□□ 0.35
TUBA4A-203ENST00000398989 WDR66Q8TBY9 1149 aa17.24■□□□□ 0.35
TUBA4A-203ENST00000398989 GBA2Q9HCG7 927 aaPredicted RBP17.24■□□□□ 0.35
TUBA4A-203ENST00000398989 CLRN2A0PK11 232 aa17.23■□□□□ 0.35
TUBA4A-203ENST00000398989 CRKP46108 304 aa17.23■□□□□ 0.35
TUBA4A-203ENST00000398989 PRAMEF18Q5VWM3 479 aa17.23■□□□□ 0.35
TUBA4A-203ENST00000398989 C2orf69Q8N8R5 385 aa17.23■□□□□ 0.35
TUBA4A-203ENST00000398989 ZBTB40Q9NUA8 1239 aa17.23■□□□□ 0.35
TUBA4A-203ENST00000398989 DENND2AQ9ULE3 1009 aa17.23■□□□□ 0.35
TUBA4A-203ENST00000398989 AOX1Q06278 1338 aa17.22■□□□□ 0.35
TUBA4A-203ENST00000398989 WDR33Q9C0J8 1336 aaKnown RBP17.22■□□□□ 0.35
TUBA4A-203ENST00000398989 SEMA3EO15041 775 aa17.22■□□□□ 0.35
TUBA4A-203ENST00000398989 HUNKP57058 714 aa17.22■□□□□ 0.35
TUBA4A-203ENST00000398989 GORABQ5T7V8 394 aa17.22■□□□□ 0.35
TUBA4A-203ENST00000398989 CYP4F22Q6NT55 531 aa17.22■□□□□ 0.35
TUBA4A-203ENST00000398989 CAPNS2Q96L46 248 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms