RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 FSD2A1L4K1 749 aa10.59□□□□□ -0.71
ATL3-201ENST00000398868 KCNA4P22459 653 aa10.59□□□□□ -0.71
ATL3-201ENST00000398868 Q3C1V9 767 aa10.59□□□□□ -0.71
ATL3-201ENST00000398868 GSTA5Q7RTV2 222 aa10.59□□□□□ -0.71
ATL3-201ENST00000398868 CCDC114Q96M63 670 aa10.59□□□□□ -0.71
ATL3-201ENST00000398868 PAXBP1Q9Y5B6 917 aa10.59□□□□□ -0.71
ATL3-201ENST00000398868 TNRQ92752 1358 aa10.59□□□□□ -0.71
ATL3-201ENST00000398868 PSMC4P43686 418 aa10.59□□□□□ -0.71
ATL3-201ENST00000398868 CCDC186Q7Z3E2 898 aa10.59□□□□□ -0.71
ATL3-201ENST00000398868 VPS36Q86VN1 386 aa10.59□□□□□ -0.71
ATL3-201ENST00000398868 CPSF2Q9P2I0 782 aaKnown RBP10.59□□□□□ -0.71
ATL3-201ENST00000398868 FANCAO15360 1455 aa10.59□□□□□ -0.71
ATL3-201ENST00000398868 CCDC169A6NNP5 214 aa10.59□□□□□ -0.71
ATL3-201ENST00000398868 RNASE9P60153 205 aaKnown RBP10.59□□□□□ -0.71
ATL3-201ENST00000398868 ASIC1P78348 528 aa10.59□□□□□ -0.71
ATL3-201ENST00000398868 ARMT1Q9H993 441 aa10.59□□□□□ -0.71
ATL3-201ENST00000398868 KIF14Q15058 1648 aa10.59□□□□□ -0.71
ATL3-201ENST00000398868 SCNN1DP51172 638 aa10.59□□□□□ -0.71
ATL3-201ENST00000398868 SARNPP82979 210 aaKnown RBP10.59□□□□□ -0.71
ATL3-201ENST00000398868 TSPYL6Q8N831 410 aa10.59□□□□□ -0.71
ATL3-201ENST00000398868 MAGI1Q96QZ7 1491 aaPredicted RBP10.59□□□□□ -0.71
ATL3-201ENST00000398868 HFM1A2PYH4 1435 aa10.58□□□□□ -0.71
ATL3-201ENST00000398868 NPHP3Q7Z494 1330 aa10.58□□□□□ -0.71
ATL3-201ENST00000398868 GRM8O00222 908 aa10.58□□□□□ -0.72
ATL3-201ENST00000398868 KRT13P13646 458 aa10.58□□□□□ -0.72
ATL3-201ENST00000398868 ZNF165P49910 485 aa10.58□□□□□ -0.72
ATL3-201ENST00000398868 NMIQ13287 307 aaPredicted RBP10.58□□□□□ -0.72
ATL3-201ENST00000398868 EIF4A2Q14240 407 aaKnown RBP10.58□□□□□ -0.72
ATL3-201ENST00000398868 NOP9Q86U38 636 aaKnown RBP10.58□□□□□ -0.72
ATL3-201ENST00000398868 CCDC63Q8NA47 563 aa10.58□□□□□ -0.72
ATL3-201ENST00000398868 LIMCH1Q9UPQ0 1083 aa10.58□□□□□ -0.72
ATL3-201ENST00000398868 IVLP07476 585 aa10.58□□□□□ -0.72
ATL3-201ENST00000398868 PLCB3Q01970 1234 aa10.58□□□□□ -0.72
ATL3-201ENST00000398868 DIXDC1Q155Q3 683 aa10.58□□□□□ -0.72
ATL3-201ENST00000398868 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.58□□□□□ -0.72
ATL3-201ENST00000398868 PRIMPOLQ96LW4 560 aa10.58□□□□□ -0.72
ATL3-201ENST00000398868 GPHNQ9NQX3 736 aaPredicted RBP10.58□□□□□ -0.72
ATL3-201ENST00000398868 KCNA6P17658 529 aa10.58□□□□□ -0.72
ATL3-201ENST00000398868 SEPT14Q6ZU15 432 aa10.58□□□□□ -0.72
ATL3-201ENST00000398868 RNF34Q969K3 372 aa10.58□□□□□ -0.72
ATL3-201ENST00000398868 CFAP57Q96MR6 1250 aa10.58□□□□□ -0.72
ATL3-201ENST00000398868 TCP10L2B9ZVM9 353 aa10.58□□□□□ -0.72
ATL3-201ENST00000398868 KIFC2Q96AC6 838 aa10.58□□□□□ -0.72
ATL3-201ENST00000398868 RBM17Q96I25 401 aaKnown RBP10.58□□□□□ -0.72
ATL3-201ENST00000398868 PLEKHH2Q8IVE3 1493 aa10.58□□□□□ -0.72
ATL3-201ENST00000398868 TRIM37O94972 964 aa10.58□□□□□ -0.72
ATL3-201ENST00000398868 MCM5P33992 734 aa10.58□□□□□ -0.72
ATL3-201ENST00000398868 CETN1Q12798 172 aa10.58□□□□□ -0.72
ATL3-201ENST00000398868 STX1AQ16623 288 aa10.58□□□□□ -0.72
ATL3-201ENST00000398868 ALS2CR12Q96Q35 445 aa10.58□□□□□ -0.72
ATL3-201ENST00000398868 GTPBP4Q9BZE4 634 aaKnown RBP10.58□□□□□ -0.72
ATL3-201ENST00000398868 PAG1Q9NWQ8 432 aa10.58□□□□□ -0.72
ATL3-201ENST00000398868 AAMPQ13685 434 aa10.58□□□□□ -0.72
ATL3-201ENST00000398868 SEPT6Q14141 434 aa10.58□□□□□ -0.72
ATL3-201ENST00000398868 MYL10Q9BUA6 226 aa10.58□□□□□ -0.72
ATL3-201ENST00000398868 TEX13AQ9BXU3 409 aaPredicted RBP10.58□□□□□ -0.72
ATL3-201ENST00000398868 RASSF4Q9H2L5 321 aa10.58□□□□□ -0.72
ATL3-201ENST00000398868 SH3BP5O60239 455 aa10.57□□□□□ -0.72
ATL3-201ENST00000398868 SKILP12757 684 aa10.57□□□□□ -0.72
ATL3-201ENST00000398868 CLCN1P35523 988 aa10.57□□□□□ -0.72
ATL3-201ENST00000398868 FAM114A2Q9NRY5 505 aa10.57□□□□□ -0.72
ATL3-201ENST00000398868 FAM13AO94988 1023 aa10.57□□□□□ -0.72
ATL3-201ENST00000398868 CMTR1Q8N1G2 835 aaKnown RBP10.57□□□□□ -0.72
ATL3-201ENST00000398868 RHPN1Q8TCX5 695 aa10.57□□□□□ -0.72
ATL3-201ENST00000398868 IFT81Q8WYA0 676 aa10.57□□□□□ -0.72
ATL3-201ENST00000398868 NAA15Q9BXJ9 866 aaKnown RBP10.57□□□□□ -0.72
ATL3-201ENST00000398868 H0YIN7 160 aa10.57□□□□□ -0.72
ATL3-201ENST00000398868 TEX11Q8IYF3 940 aa10.57□□□□□ -0.72
ATL3-201ENST00000398868 PPP1R12CQ9BZL4 782 aa10.57□□□□□ -0.72
ATL3-201ENST00000398868 TSPOAP1O95153 1857 aa10.57□□□□□ -0.72
ATL3-201ENST00000398868 PCF11O94913 1555 aaKnown RBP10.57□□□□□ -0.72
ATL3-201ENST00000398868 ZNF174Q15697 407 aa10.57□□□□□ -0.72
ATL3-201ENST00000398868 LETM2Q2VYF4 491 aa10.57□□□□□ -0.72
ATL3-201ENST00000398868 RBM8AQ9Y5S9 174 aaKnown RBP10.57□□□□□ -0.72
ATL3-201ENST00000398868 UBASH3AP57075 661 aa10.57□□□□□ -0.72
ATL3-201ENST00000398868 GADL1Q6ZQY3 521 aa10.57□□□□□ -0.72
ATL3-201ENST00000398868 TMOD4Q9NZQ9 345 aa10.57□□□□□ -0.72
ATL3-201ENST00000398868 POTEB2H3BUK9 544 aa10.57□□□□□ -0.72
ATL3-201ENST00000398868 ZBTB16Q05516 673 aa10.57□□□□□ -0.72
ATL3-201ENST00000398868 SMCR8Q8TEV9 937 aaPredicted RBP10.57□□□□□ -0.72
ATL3-201ENST00000398868 NYXQ9GZU5 481 aa10.57□□□□□ -0.72
ATL3-201ENST00000398868 CTDSPL2Q05D32 466 aa10.56□□□□□ -0.72
ATL3-201ENST00000398868 RAPGEF1Q13905 1077 aa10.56□□□□□ -0.72
ATL3-201ENST00000398868 CCDC65Q8IXS2 484 aa10.56□□□□□ -0.72
ATL3-201ENST00000398868 NCBP1Q09161 790 aaKnown RBP10.56□□□□□ -0.72
ATL3-201ENST00000398868 DPP8Q6V1X1 898 aaPredicted RBP10.56□□□□□ -0.72
ATL3-201ENST00000398868 TRIM6Q9C030 488 aaPredicted RBP10.56□□□□□ -0.72
ATL3-201ENST00000398868 PLEKHA4Q9H4M7 779 aa10.56□□□□□ -0.72
ATL3-201ENST00000398868 NOP56O00567 594 aaKnown RBP10.56□□□□□ -0.72
ATL3-201ENST00000398868 N4BP3O15049 544 aa10.56□□□□□ -0.72
ATL3-201ENST00000398868 RRP36Q96EU6 259 aaKnown RBP10.56□□□□□ -0.72
ATL3-201ENST00000398868 TTC21BQ7Z4L5 1316 aa10.56□□□□□ -0.72
ATL3-201ENST00000398868 GCP02774 474 aa10.56□□□□□ -0.72
ATL3-201ENST00000398868 GSDMDP57764 484 aa10.56□□□□□ -0.72
ATL3-201ENST00000398868 CCDC25Q86WR0 208 aa10.56□□□□□ -0.72
ATL3-201ENST00000398868 C17orf53Q8N3J3 647 aaPredicted RBP10.56□□□□□ -0.72
ATL3-201ENST00000398868 ESR2Q92731 530 aa10.56□□□□□ -0.72
ATL3-201ENST00000398868 FRMD3A2A2Y4 597 aa10.56□□□□□ -0.72
ATL3-201ENST00000398868 MBD4O95243 580 aa10.56□□□□□ -0.72
ATL3-201ENST00000398868 SDSP20132 328 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms