RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 MMP14P50281 582 aa16.86■□□□□ 0.29
VCX3A-202ENST00000398729 GTF2IP78347 998 aa16.86■□□□□ 0.29
VCX3A-202ENST00000398729 RABL6Q3YEC7 729 aaPredicted RBP16.86■□□□□ 0.29
VCX3A-202ENST00000398729 MOB2Q70IA6 237 aa16.86■□□□□ 0.29
VCX3A-202ENST00000398729 ZNF804AQ7Z570 1209 aa16.86■□□□□ 0.29
VCX3A-202ENST00000398729 MXD3Q9BW11 206 aa16.86■□□□□ 0.29
VCX3A-202ENST00000398729 USP44Q9H0E7 712 aa16.86■□□□□ 0.29
VCX3A-202ENST00000398729 SCAF8Q9UPN6 1271 aaKnown RBP16.86■□□□□ 0.29
VCX3A-202ENST00000398729 IRS2Q9Y4H2 1338 aa16.86■□□□□ 0.29
VCX3A-202ENST00000398729 DIEXFQ68CQ4 756 aaKnown RBP16.85■□□□□ 0.29
VCX3A-202ENST00000398729 UBE4AQ14139 1066 aa16.84■□□□□ 0.29
VCX3A-202ENST00000398729 REM2Q8IYK8 340 aaPredicted RBP16.84■□□□□ 0.29
VCX3A-202ENST00000398729 ANKRD44Q8N8A2 993 aa16.84■□□□□ 0.29
VCX3A-202ENST00000398729 HDAC9Q9UKV0 1011 aa16.84■□□□□ 0.29
VCX3A-202ENST00000398729 NOB1Q9ULX3 412 aaKnown RBP16.84■□□□□ 0.29
VCX3A-202ENST00000398729 HPS5Q9UPZ3 1129 aa16.84■□□□□ 0.29
VCX3A-202ENST00000398729 PITPNM2Q9BZ72 1349 aa16.84■□□□□ 0.29
VCX3A-202ENST00000398729 IL1R1P14778 569 aa16.83■□□□□ 0.28
VCX3A-202ENST00000398729 FKBP1BP68106 108 aa16.83■□□□□ 0.28
VCX3A-202ENST00000398729 PRAMEF18Q5VWM3 479 aa16.83■□□□□ 0.28
VCX3A-202ENST00000398729 MROH5Q6ZUA9 1318 aa16.83■□□□□ 0.28
VCX3A-202ENST00000398729 KIAA0825Q8IV33 1275 aa16.83■□□□□ 0.28
VCX3A-202ENST00000398729 MIER1Q8N108 512 aa16.83■□□□□ 0.28
VCX3A-202ENST00000398729 PUS3Q9BZE2 481 aaKnown RBP16.83■□□□□ 0.28
VCX3A-202ENST00000398729 API5Q9BZZ5 524 aaKnown RBP16.83■□□□□ 0.28
VCX3A-202ENST00000398729 RIPOR2Q9Y4F9 1068 aa16.83■□□□□ 0.28
VCX3A-202ENST00000398729 UBE2Q2LH0YL09 131 aa16.82■□□□□ 0.28
VCX3A-202ENST00000398729 TBC1D8O95759 1140 aa16.82■□□□□ 0.28
VCX3A-202ENST00000398729 RARSP54136 660 aaKnown RBP16.82■□□□□ 0.28
VCX3A-202ENST00000398729 NBPF9Q3BBW0 867 aa16.82■□□□□ 0.28
VCX3A-202ENST00000398729 WNT10BO00744 389 aa16.81■□□□□ 0.28
VCX3A-202ENST00000398729 ZNF296Q8WUU4 475 aaPredicted RBP16.81■□□□□ 0.28
VCX3A-202ENST00000398729 KIF16BQ96L93 1317 aa16.8■□□□□ 0.28
VCX3A-202ENST00000398729 TM4SF4P48230 202 aa16.8■□□□□ 0.28
VCX3A-202ENST00000398729 FKBP1AP62942 108 aaKnown RBP16.8■□□□□ 0.28
VCX3A-202ENST00000398729 METTL24Q5JXM2 366 aa16.8■□□□□ 0.28
VCX3A-202ENST00000398729 PRPF38BQ5VTL8 546 aaKnown RBP16.8■□□□□ 0.28
VCX3A-202ENST00000398729 MKI67P46013 3256 aaKnown RBP16.8■□□□□ 0.28
VCX3A-202ENST00000398729 UBTFL1P0CB47 393 aaPredicted RBP16.79■□□□□ 0.28
VCX3A-202ENST00000398729 HIBADHP31937 336 aaKnown RBP16.79■□□□□ 0.28
VCX3A-202ENST00000398729 LRRC24Q50LG9 513 aa16.79■□□□□ 0.28
VCX3A-202ENST00000398729 CERS5Q8N5B7 392 aa16.79■□□□□ 0.28
VCX3A-202ENST00000398729 R3HDMLQ9H3Y0 253 aa16.79■□□□□ 0.28
VCX3A-202ENST00000398729 HDAC5Q9UQL6 1122 aa16.79■□□□□ 0.28
VCX3A-202ENST00000398729 SASH1O94885 1247 aa16.78■□□□□ 0.28
VCX3A-202ENST00000398729 GYG1P46976 350 aa16.78■□□□□ 0.28
VCX3A-202ENST00000398729 PKN2Q16513 984 aaKnown RBP16.78■□□□□ 0.28
VCX3A-202ENST00000398729 TDRD7Q8NHU6 1098 aaKnown RBP16.78■□□□□ 0.28
VCX3A-202ENST00000398729 ARHGAP45Q92619 1136 aa16.78■□□□□ 0.28
VCX3A-202ENST00000398729 PDE8BO95263 885 aa16.77■□□□□ 0.28
VCX3A-202ENST00000398729 HNRNPUQ00839 825 aaKnown RBP eCLIP16.77■□□□□ 0.28
VCX3A-202ENST00000398729 DLGAP5Q15398 846 aa16.77■□□□□ 0.28
VCX3A-202ENST00000398729 VPS37DQ86XT2 251 aa16.77■□□□□ 0.28
VCX3A-202ENST00000398729 KLHDC4Q8TBB5 520 aa16.77■□□□□ 0.28
VCX3A-202ENST00000398729 FAM84BQ96KN1 310 aaPredicted RBP16.77■□□□□ 0.28
VCX3A-202ENST00000398729 JAG2Q9Y219 1238 aa16.77■□□□□ 0.28
VCX3A-202ENST00000398729 HTTP42858 3142 aa16.76■□□□□ 0.27
VCX3A-202ENST00000398729 FAM205AQ6ZU69 1335 aa16.76■□□□□ 0.27
VCX3A-202ENST00000398729 F8W031 263 aaPredicted RBP16.76■□□□□ 0.27
VCX3A-202ENST00000398729 GPR25O00155 361 aa16.76■□□□□ 0.27
VCX3A-202ENST00000398729 IPO8O15397 1037 aaKnown RBP16.76■□□□□ 0.27
VCX3A-202ENST00000398729 CAVIN4Q5BKX8 364 aa16.76■□□□□ 0.27
VCX3A-202ENST00000398729 APOBEC3FQ8IUX4 373 aaKnown RBP16.76■□□□□ 0.27
VCX3A-202ENST00000398729 VGLL2Q8N8G2 317 aa16.76■□□□□ 0.27
VCX3A-202ENST00000398729 ZBED3Q96IU2 234 aaPredicted RBP16.76■□□□□ 0.27
VCX3A-202ENST00000398729 PAPPA2Q9BXP8 1791 aa16.76■□□□□ 0.27
VCX3A-202ENST00000398729 CENPFP49454 3210 aa16.75■□□□□ 0.27
VCX3A-202ENST00000398729 MYO1BO43795 1136 aa16.75■□□□□ 0.27
VCX3A-202ENST00000398729 NF2P35240 595 aa16.75■□□□□ 0.27
VCX3A-202ENST00000398729 RFX5P48382 616 aaPredicted RBP16.75■□□□□ 0.27
VCX3A-202ENST00000398729 NOM1Q5C9Z4 860 aaKnown RBP16.75■□□□□ 0.27
VCX3A-202ENST00000398729 MFSD14BQ5SR56 506 aa16.75■□□□□ 0.27
VCX3A-202ENST00000398729 MTMR14Q8NCE2 650 aa16.75■□□□□ 0.27
VCX3A-202ENST00000398729 EYA2O00167 538 aa16.74■□□□□ 0.27
VCX3A-202ENST00000398729 PTPN12Q05209 780 aaKnown RBP16.74■□□□□ 0.27
VCX3A-202ENST00000398729 MKRN3Q13064 507 aaKnown RBP16.74■□□□□ 0.27
VCX3A-202ENST00000398729 PUM3Q15397 648 aaKnown RBP16.74■□□□□ 0.27
VCX3A-202ENST00000398729 CFAP100Q494V2 611 aa16.74■□□□□ 0.27
VCX3A-202ENST00000398729 INTS3Q68E01 1043 aaKnown RBP16.74■□□□□ 0.27
VCX3A-202ENST00000398729 FBXO33Q7Z6M2 555 aa16.74■□□□□ 0.27
VCX3A-202ENST00000398729 LRRFIP2Q9Y608 721 aaKnown RBP16.74■□□□□ 0.27
VCX3A-202ENST00000398729 ECM29Q5VYK3 1845 aa16.73■□□□□ 0.27
VCX3A-202ENST00000398729 FRAT2O75474 233 aaPredicted RBP16.73■□□□□ 0.27
VCX3A-202ENST00000398729 IFIT1P09914 478 aaKnown RBP16.73■□□□□ 0.27
VCX3A-202ENST00000398729 RBM5P52756 815 aaKnown RBP eCLIP16.73■□□□□ 0.27
VCX3A-202ENST00000398729 MEIS3Q99687 375 aa16.73■□□□□ 0.27
VCX3A-202ENST00000398729 CFHR5Q9BXR6 569 aa16.73■□□□□ 0.27
VCX3A-202ENST00000398729 FBXO3Q9UK99 471 aa16.73■□□□□ 0.27
VCX3A-202ENST00000398729 SPDYE2BA6NHP3 402 aa16.72■□□□□ 0.27
VCX3A-202ENST00000398729 GNAI3P08754 354 aa16.72■□□□□ 0.27
VCX3A-202ENST00000398729 SPDYE6P0CI01 402 aa16.72■□□□□ 0.27
VCX3A-202ENST00000398729 TTLL12Q14166 644 aaPredicted RBP16.72■□□□□ 0.27
VCX3A-202ENST00000398729 LDLRAD1Q5T700 205 aa16.72■□□□□ 0.27
VCX3A-202ENST00000398729 FBXO46Q6PJ61 603 aaPredicted RBP16.72■□□□□ 0.27
VCX3A-202ENST00000398729 FRAT1Q92837 279 aaPredicted RBP16.72■□□□□ 0.27
VCX3A-202ENST00000398729 TTF2Q9UNY4 1162 aaKnown RBP16.72■□□□□ 0.27
VCX3A-202ENST00000398729 IQSEC3Q9UPP2 1182 aaPredicted RBP16.72■□□□□ 0.27
VCX3A-202ENST00000398729 COL1A1P02452 1464 aaPredicted RBP16.72■□□□□ 0.27
VCX3A-202ENST00000398729 ARAP2Q8WZ64 1704 aa16.71■□□□□ 0.27
VCX3A-202ENST00000398729 BCAR3O75815 825 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms