RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 TJP1Q07157 1748 aa11.85□□□□□ -0.51
HMGCLL1-205ENST00000398661 WTIPA6NIX2 430 aaPredicted RBP11.85□□□□□ -0.51
HMGCLL1-205ENST00000398661 NPHP1O15259 732 aa11.85□□□□□ -0.51
HMGCLL1-205ENST00000398661 NEMFO60524 1076 aa11.85□□□□□ -0.51
HMGCLL1-205ENST00000398661 FOXO4P98177 505 aa11.85□□□□□ -0.51
HMGCLL1-205ENST00000398661 MUM1L1Q5H9M0 696 aa11.85□□□□□ -0.51
HMGCLL1-205ENST00000398661 TXLNBQ8N3L3 684 aa11.85□□□□□ -0.51
HMGCLL1-205ENST00000398661 SSH3Q8TE77 659 aa11.85□□□□□ -0.51
HMGCLL1-205ENST00000398661 ZBTB9Q96C00 473 aa11.85□□□□□ -0.51
HMGCLL1-205ENST00000398661 SALL3Q9BXA9 1300 aa11.85□□□□□ -0.51
HMGCLL1-205ENST00000398661 LIMCH1Q9UPQ0 1083 aa11.85□□□□□ -0.51
HMGCLL1-205ENST00000398661 MTMR6Q9Y217 621 aa11.85□□□□□ -0.51
HMGCLL1-205ENST00000398661 ARFGEF2Q9Y6D5 1785 aa11.84□□□□□ -0.51
HMGCLL1-205ENST00000398661 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.84□□□□□ -0.51
HMGCLL1-205ENST00000398661 LIG1P18858 919 aa11.84□□□□□ -0.51
HMGCLL1-205ENST00000398661 AK2P54819 239 aa11.84□□□□□ -0.51
HMGCLL1-205ENST00000398661 ZNF827Q17R98 1081 aa11.84□□□□□ -0.51
HMGCLL1-205ENST00000398661 LRRC24Q50LG9 513 aa11.84□□□□□ -0.51
HMGCLL1-205ENST00000398661 CKAP2LQ8IYA6 745 aa11.84□□□□□ -0.51
HMGCLL1-205ENST00000398661 NEK11Q8NG66 645 aa11.84□□□□□ -0.51
HMGCLL1-205ENST00000398661 TTC14Q96N46 770 aa11.84□□□□□ -0.51
HMGCLL1-205ENST00000398661 ISCA1Q9BUE6 129 aa11.84□□□□□ -0.51
HMGCLL1-205ENST00000398661 CCDC8Q9H0W5 538 aaPredicted RBP11.84□□□□□ -0.51
HMGCLL1-205ENST00000398661 TNMDQ9H2S6 317 aa11.84□□□□□ -0.51
HMGCLL1-205ENST00000398661 H7C1W4 665 aa11.84□□□□□ -0.51
HMGCLL1-205ENST00000398661 EPB41L2O43491 1005 aaKnown RBP11.84□□□□□ -0.51
HMGCLL1-205ENST00000398661 PNMA6AP0CW24 399 aaPredicted RBP11.84□□□□□ -0.51
HMGCLL1-205ENST00000398661 CLCN6P51797 869 aa11.84□□□□□ -0.51
HMGCLL1-205ENST00000398661 MSL1Q68DK7 614 aa11.84□□□□□ -0.51
HMGCLL1-205ENST00000398661 AK7Q96M32 723 aa11.84□□□□□ -0.51
HMGCLL1-205ENST00000398661 LARP6Q9BRS8 491 aaKnown RBP11.84□□□□□ -0.51
HMGCLL1-205ENST00000398661 LAMB4A4D0S4 1761 aa11.83□□□□□ -0.52
HMGCLL1-205ENST00000398661 EZH2Q15910 746 aaKnown RBP11.83□□□□□ -0.52
HMGCLL1-205ENST00000398661 RUFY3Q7L099 469 aa11.83□□□□□ -0.52
HMGCLL1-205ENST00000398661 GREM2Q9H772 168 aa11.83□□□□□ -0.52
HMGCLL1-205ENST00000398661 RTCBQ9Y3I0 505 aaKnown RBP11.83□□□□□ -0.52
HMGCLL1-205ENST00000398661 SASH1O94885 1247 aa11.83□□□□□ -0.52
HMGCLL1-205ENST00000398661 SKILP12757 684 aa11.83□□□□□ -0.52
HMGCLL1-205ENST00000398661 GJB2P29033 226 aa11.83□□□□□ -0.52
HMGCLL1-205ENST00000398661 NOP2P46087 812 aaKnown RBP11.83□□□□□ -0.52
HMGCLL1-205ENST00000398661 POLA2Q14181 598 aa11.83□□□□□ -0.52
HMGCLL1-205ENST00000398661 ARID5BQ14865 1188 aa11.83□□□□□ -0.52
HMGCLL1-205ENST00000398661 ERCC6LQ2NKX8 1250 aa11.83□□□□□ -0.52
HMGCLL1-205ENST00000398661 SYT10Q6XYQ8 523 aa11.83□□□□□ -0.52
HMGCLL1-205ENST00000398661 TTC6Q86TZ1 520 aa11.83□□□□□ -0.52
HMGCLL1-205ENST00000398661 CCDC191Q8NCU4 936 aa11.83□□□□□ -0.52
HMGCLL1-205ENST00000398661 HELBQ8NG08 1087 aaPredicted RBP11.83□□□□□ -0.52
HMGCLL1-205ENST00000398661 SEC31BQ9NQW1 1179 aa11.83□□□□□ -0.52
HMGCLL1-205ENST00000398661 SBF2Q86WG5 1849 aa11.82□□□□□ -0.52
HMGCLL1-205ENST00000398661 IRS4O14654 1257 aaPredicted RBP11.82□□□□□ -0.52
HMGCLL1-205ENST00000398661 TPM4P67936 248 aa11.82□□□□□ -0.52
HMGCLL1-205ENST00000398661 PTPN12Q05209 780 aaKnown RBP11.82□□□□□ -0.52
HMGCLL1-205ENST00000398661 KRBA2Q6ZNG9 492 aa11.82□□□□□ -0.52
HMGCLL1-205ENST00000398661 CCAR2Q8N163 923 aaKnown RBP11.82□□□□□ -0.52
HMGCLL1-205ENST00000398661 RHPN1Q8TCX5 695 aa11.82□□□□□ -0.52
HMGCLL1-205ENST00000398661 LRRCC1Q9C099 1032 aa11.82□□□□□ -0.52
HMGCLL1-205ENST00000398661 TRMT1Q9NXH9 659 aaKnown RBP11.82□□□□□ -0.52
HMGCLL1-205ENST00000398661 AFDNP55196 1824 aaKnown RBP11.82□□□□□ -0.52
HMGCLL1-205ENST00000398661 KIF2AO00139 706 aaPredicted RBP11.82□□□□□ -0.52
HMGCLL1-205ENST00000398661 CHGBP05060 677 aa11.82□□□□□ -0.52
HMGCLL1-205ENST00000398661 RFC4P35249 363 aa11.82□□□□□ -0.52
HMGCLL1-205ENST00000398661 ZNF165P49910 485 aa11.82□□□□□ -0.52
HMGCLL1-205ENST00000398661 TFCP2L1Q9NZI6 479 aa11.82□□□□□ -0.52
HMGCLL1-205ENST00000398661 WWC3Q9ULE0 1092 aa11.82□□□□□ -0.52
HMGCLL1-205ENST00000398661 SNX14Q9Y5W7 946 aa11.82□□□□□ -0.52
HMGCLL1-205ENST00000398661 PXDNLA1KZ92 1463 aa11.82□□□□□ -0.52
HMGCLL1-205ENST00000398661 POLR3GO15318 223 aaPredicted RBP11.81□□□□□ -0.52
HMGCLL1-205ENST00000398661 ERFEQ4G0M1 354 aa11.81□□□□□ -0.52
HMGCLL1-205ENST00000398661 RBM43Q6ZSC3 357 aaKnown RBP11.81□□□□□ -0.52
HMGCLL1-205ENST00000398661 IL25Q9H293 177 aa11.81□□□□□ -0.52
HMGCLL1-205ENST00000398661 GEMIN8Q9NWZ8 242 aaKnown RBP11.81□□□□□ -0.52
HMGCLL1-205ENST00000398661 DACT1Q9NYF0 836 aa11.81□□□□□ -0.52
HMGCLL1-205ENST00000398661 ELP1O95163 1332 aa11.81□□□□□ -0.52
HMGCLL1-205ENST00000398661 VPS37CA5D8V6 355 aaPredicted RBP11.81□□□□□ -0.52
HMGCLL1-205ENST00000398661 DHX16O60231 1041 aaKnown RBP11.81□□□□□ -0.52
HMGCLL1-205ENST00000398661 ZPR1O75312 459 aa11.81□□□□□ -0.52
HMGCLL1-205ENST00000398661 LARGE1O95461 756 aa11.81□□□□□ -0.52
HMGCLL1-205ENST00000398661 TIMM10P62072 90 aa11.81□□□□□ -0.52
HMGCLL1-205ENST00000398661 KRT85P78386 507 aa11.81□□□□□ -0.52
HMGCLL1-205ENST00000398661 CCZ1BP86790 482 aa11.81□□□□□ -0.52
HMGCLL1-205ENST00000398661 CCZ1P86791 482 aaPredicted RBP11.81□□□□□ -0.52
HMGCLL1-205ENST00000398661 TFCP2Q12800 502 aa11.81□□□□□ -0.52
HMGCLL1-205ENST00000398661 CCDC83Q8IWF9 413 aa11.81□□□□□ -0.52
HMGCLL1-205ENST00000398661 EDC3Q96F86 508 aaKnown RBP11.81□□□□□ -0.52
HMGCLL1-205ENST00000398661 DNAJC25Q9H1X3 360 aa11.81□□□□□ -0.52
HMGCLL1-205ENST00000398661 L2HGDHQ9H9P8 463 aa11.81□□□□□ -0.52
HMGCLL1-205ENST00000398661 KCND1Q9NSA2 647 aa11.81□□□□□ -0.52
HMGCLL1-205ENST00000398661 UTYO14607 1347 aa11.8□□□□□ -0.52
HMGCLL1-205ENST00000398661 ZRANB2O95218 330 aaKnown RBP eCLIP11.8□□□□□ -0.52
HMGCLL1-205ENST00000398661 ZNF34Q8IZ26 560 aa11.8□□□□□ -0.52
HMGCLL1-205ENST00000398661 ZBTB38Q8NAP3 1195 aaPredicted RBP11.8□□□□□ -0.52
HMGCLL1-205ENST00000398661 EAF2Q96CJ1 260 aaPredicted RBP11.8□□□□□ -0.52
HMGCLL1-205ENST00000398661 CLSTN2Q9H4D0 955 aa11.8□□□□□ -0.52
HMGCLL1-205ENST00000398661 DDX19AQ9NUU7 478 aaKnown RBP11.8□□□□□ -0.52
HMGCLL1-205ENST00000398661 CCDC69A6NI79 296 aa11.8□□□□□ -0.52
HMGCLL1-205ENST00000398661 MYO1CO00159 1063 aa11.8□□□□□ -0.52
HMGCLL1-205ENST00000398661 RPS6KA4O75676 772 aa11.8□□□□□ -0.52
HMGCLL1-205ENST00000398661 RFX5P48382 616 aaPredicted RBP11.8□□□□□ -0.52
HMGCLL1-205ENST00000398661 TRAPPC3LQ5T215 181 aa11.8□□□□□ -0.52
HMGCLL1-205ENST00000398661 CTR9Q6PD62 1173 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms