RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 CDC37L1Q7L3B6 337 aa12.63□□□□□ -0.39
NIFKP1-201ENST00000398317 ZC3H12CQ9C0D7 883 aaKnown RBP12.63□□□□□ -0.39
NIFKP1-201ENST00000398317 ANKIB1Q9P2G1 1089 aa12.63□□□□□ -0.39
NIFKP1-201ENST00000398317 TSKSQ9UJT2 592 aa12.63□□□□□ -0.39
NIFKP1-201ENST00000398317 MAP3K2Q9Y2U5 619 aa12.63□□□□□ -0.39
NIFKP1-201ENST00000398317 SPEF2Q9C093 1822 aa12.62□□□□□ -0.39
NIFKP1-201ENST00000398317 MYH3P11055 1940 aa12.62□□□□□ -0.39
NIFKP1-201ENST00000398317 CASP8AP2Q9UKL3 1982 aa12.62□□□□□ -0.39
NIFKP1-201ENST00000398317 DDX58O95786 925 aaKnown RBP12.62□□□□□ -0.39
NIFKP1-201ENST00000398317 HSP90B1P14625 803 aaKnown RBP12.62□□□□□ -0.39
NIFKP1-201ENST00000398317 BEGAINQ9BUH8 593 aa12.62□□□□□ -0.39
NIFKP1-201ENST00000398317 PODXL2Q9NZ53 605 aa12.62□□□□□ -0.39
NIFKP1-201ENST00000398317 GGA1Q9UJY5 639 aa12.62□□□□□ -0.39
NIFKP1-201ENST00000398317 PI4KAP2A4QPH2 592 aa12.61□□□□□ -0.39
NIFKP1-201ENST00000398317 IGKV5-2P06315 115 aa12.61□□□□□ -0.39
NIFKP1-201ENST00000398317 PPP4R3BQ5MIZ7 849 aa12.61□□□□□ -0.39
NIFKP1-201ENST00000398317 PI4KAP1Q8N8J0 262 aa12.61□□□□□ -0.39
NIFKP1-201ENST00000398317 PCDH10Q9P2E7 1040 aa12.61□□□□□ -0.39
NIFKP1-201ENST00000398317 ADM5C9JUS6 153 aa12.6□□□□□ -0.39
NIFKP1-201ENST00000398317 VIL1P09327 827 aaKnown RBP12.6□□□□□ -0.39
NIFKP1-201ENST00000398317 RPS12P25398 132 aaKnown RBP12.6□□□□□ -0.39
NIFKP1-201ENST00000398317 MAP2K2P36507 400 aa12.6□□□□□ -0.39
NIFKP1-201ENST00000398317 KSR2Q6VAB6 950 aa12.6□□□□□ -0.39
NIFKP1-201ENST00000398317 G2E3Q7L622 706 aa12.6□□□□□ -0.39
NIFKP1-201ENST00000398317 KRT26Q7Z3Y9 468 aa12.6□□□□□ -0.39
NIFKP1-201ENST00000398317 ANKRD18AQ8IVF6 992 aa12.6□□□□□ -0.39
NIFKP1-201ENST00000398317 DDX12PQ92771 950 aa12.6□□□□□ -0.39
NIFKP1-201ENST00000398317 PSME4Q14997 1843 aa12.6□□□□□ -0.39
NIFKP1-201ENST00000398317 WTIPA6NIX2 430 aaPredicted RBP12.59□□□□□ -0.39
NIFKP1-201ENST00000398317 FOSBP53539 338 aa12.59□□□□□ -0.39
NIFKP1-201ENST00000398317 CTSWP56202 376 aa12.59□□□□□ -0.39
NIFKP1-201ENST00000398317 HUNKP57058 714 aa12.59□□□□□ -0.39
NIFKP1-201ENST00000398317 CWF19L2Q2TBE0 894 aaKnown RBP12.59□□□□□ -0.39
NIFKP1-201ENST00000398317 KIF4BQ2VIQ3 1234 aa12.59□□□□□ -0.39
NIFKP1-201ENST00000398317 WWC1Q8IX03 1113 aa12.59□□□□□ -0.39
NIFKP1-201ENST00000398317 DCPSQ96C86 337 aaKnown RBP12.59□□□□□ -0.39
NIFKP1-201ENST00000398317 HHIPL1Q96JK4 782 aa12.59□□□□□ -0.39
NIFKP1-201ENST00000398317 ZIC5Q96T25 663 aa12.59□□□□□ -0.39
NIFKP1-201ENST00000398317 STK31Q9BXU1 1019 aa12.59□□□□□ -0.39
NIFKP1-201ENST00000398317 CHMP4AQ9BY43 222 aa12.59□□□□□ -0.39
NIFKP1-201ENST00000398317 ASTN2O75129 1339 aaPredicted RBP12.59□□□□□ -0.39
NIFKP1-201ENST00000398317 TWISTNBQ3B726 338 aaPredicted RBP12.58□□□□□ -0.4
NIFKP1-201ENST00000398317 TTLL11Q8NHH1 800 aa12.58□□□□□ -0.4
NIFKP1-201ENST00000398317 ABHD8Q96I13 439 aa12.58□□□□□ -0.4
NIFKP1-201ENST00000398317 GREM2Q9H772 168 aa12.58□□□□□ -0.4
NIFKP1-201ENST00000398317 XDHP47989 1333 aa12.58□□□□□ -0.4
NIFKP1-201ENST00000398317 NEURL1BA8MQ27 555 aa12.57□□□□□ -0.4
NIFKP1-201ENST00000398317 ATP2B4P23634 1241 aa12.57□□□□□ -0.4
NIFKP1-201ENST00000398317 PSEN2P49810 448 aa12.57□□□□□ -0.4
NIFKP1-201ENST00000398317 NEXNQ0ZGT2 675 aa12.57□□□□□ -0.4
NIFKP1-201ENST00000398317 CCDC27Q2M243 656 aa12.57□□□□□ -0.4
NIFKP1-201ENST00000398317 RSBN1LQ6PCB5 846 aaPredicted RBP12.57□□□□□ -0.4
NIFKP1-201ENST00000398317 CDC5LQ99459 802 aaKnown RBP12.57□□□□□ -0.4
NIFKP1-201ENST00000398317 GBA2Q9HCG7 927 aaPredicted RBP12.57□□□□□ -0.4
NIFKP1-201ENST00000398317 GGA3Q9NZ52 723 aa12.57□□□□□ -0.4
NIFKP1-201ENST00000398317 SALL2Q9Y467 1007 aaPredicted RBP12.57□□□□□ -0.4
NIFKP1-201ENST00000398317 CACNA1FO60840 1977 aa12.57□□□□□ -0.4
NIFKP1-201ENST00000398317 BRPF1P55201 1214 aaPredicted RBP12.56□□□□□ -0.4
NIFKP1-201ENST00000398317 SCARF1Q14162 830 aa12.56□□□□□ -0.4
NIFKP1-201ENST00000398317 UBE3BQ7Z3V4 1068 aa12.56□□□□□ -0.4
NIFKP1-201ENST00000398317 C2orf69Q8N8R5 385 aa12.56□□□□□ -0.4
NIFKP1-201ENST00000398317 PLSCR2Q9NRY7 297 aa12.56□□□□□ -0.4
NIFKP1-201ENST00000398317 MINPP1Q9UNW1 487 aa12.56□□□□□ -0.4
NIFKP1-201ENST00000398317 PCDHGA10Q9Y5H3 936 aa12.56□□□□□ -0.4
NIFKP1-201ENST00000398317 USP17L3A6NCW0 530 aa12.55□□□□□ -0.4
NIFKP1-201ENST00000398317 USP17L4A6NCW7 530 aa12.55□□□□□ -0.4
NIFKP1-201ENST00000398317 H7C1W4 665 aa12.55□□□□□ -0.4
NIFKP1-201ENST00000398317 ZNF280AP59817 542 aaPredicted RBP12.55□□□□□ -0.4
NIFKP1-201ENST00000398317 RGMBQ6NW40 437 aa12.55□□□□□ -0.4
NIFKP1-201ENST00000398317 USP17L1Q7RTZ2 530 aa12.55□□□□□ -0.4
NIFKP1-201ENST00000398317 SULF1Q8IWU6 871 aa12.55□□□□□ -0.4
NIFKP1-201ENST00000398317 AGBL3Q8NEM8 1001 aa12.55□□□□□ -0.4
NIFKP1-201ENST00000398317 KCNK17Q96T54 332 aa12.55□□□□□ -0.4
NIFKP1-201ENST00000398317 MXD3Q9BW11 206 aa12.55□□□□□ -0.4
NIFKP1-201ENST00000398317 ADAM33Q9BZ11 813 aa12.55□□□□□ -0.4
NIFKP1-201ENST00000398317 BSDC1Q9NW68 430 aaPredicted RBP12.55□□□□□ -0.4
NIFKP1-201ENST00000398317 SCAF8Q9UPN6 1271 aaKnown RBP12.55□□□□□ -0.4
NIFKP1-201ENST00000398317 AKAP11Q9UKA4 1901 aa12.54□□□□□ -0.4
NIFKP1-201ENST00000398317 FAM155AB1AL88 458 aaPredicted RBP12.54□□□□□ -0.4
NIFKP1-201ENST00000398317 CA12O43570 354 aa12.54□□□□□ -0.4
NIFKP1-201ENST00000398317 ZNF157P51786 506 aaPredicted RBP12.54□□□□□ -0.4
NIFKP1-201ENST00000398317 FLIIQ13045 1269 aa12.54□□□□□ -0.4
NIFKP1-201ENST00000398317 NOGQ13253 232 aa12.54□□□□□ -0.4
NIFKP1-201ENST00000398317 ANGEL2Q5VTE6 544 aaKnown RBP12.54□□□□□ -0.4
NIFKP1-201ENST00000398317 FBXW7Q969H0 707 aa12.54□□□□□ -0.4
NIFKP1-201ENST00000398317 CDCA5Q96FF9 252 aa12.54□□□□□ -0.4
NIFKP1-201ENST00000398317 GMLQ99445 158 aa12.54□□□□□ -0.4
NIFKP1-201ENST00000398317 MRS2Q9HD23 443 aa12.54□□□□□ -0.4
NIFKP1-201ENST00000398317 MYOZ2Q9NPC6 264 aa12.54□□□□□ -0.4
NIFKP1-201ENST00000398317 ZNF646O15015 1829 aaPredicted RBP12.53□□□□□ -0.4
NIFKP1-201ENST00000398317 GRXCR2A6NFK2 248 aa12.53□□□□□ -0.4
NIFKP1-201ENST00000398317 CCDC85CA6NKD9 419 aa12.53□□□□□ -0.4
NIFKP1-201ENST00000398317 USP17L8P0C7I0 530 aa12.53□□□□□ -0.4
NIFKP1-201ENST00000398317 IGHMBP2P38935 993 aaKnown RBP12.53□□□□□ -0.4
NIFKP1-201ENST00000398317 CCT4P50991 539 aaKnown RBP12.53□□□□□ -0.4
NIFKP1-201ENST00000398317 FKBP5Q13451 457 aaPredicted RBP12.53□□□□□ -0.4
NIFKP1-201ENST00000398317 GCKRQ14397 625 aa12.53□□□□□ -0.4
NIFKP1-201ENST00000398317 DMRTA1Q5VZB9 504 aa12.53□□□□□ -0.4
NIFKP1-201ENST00000398317 PODNQ7Z5L7 613 aa12.53□□□□□ -0.4
NIFKP1-201ENST00000398317 TXNRD3Q86VQ6 643 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms