RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 TNFRSF10BO14763 440 aa5.47□□□□□ -1.53
CD47-203ENST00000398258 PTPRAP18433 802 aa5.47□□□□□ -1.53
CD47-203ENST00000398258 RXRBP28702 533 aa5.47□□□□□ -1.53
CD47-203ENST00000398258 PIP4K2BP78356 416 aa5.47□□□□□ -1.53
CD47-203ENST00000398258 NFKBIBQ15653 356 aa5.47□□□□□ -1.53
CD47-203ENST00000398258 CPSF6Q16630 551 aaKnown RBP eCLIP5.47□□□□□ -1.53
CD47-203ENST00000398258 ZNF792Q3KQV3 632 aa5.47□□□□□ -1.53
CD47-203ENST00000398258 FAM117BQ6P1L5 589 aa5.47□□□□□ -1.53
CD47-203ENST00000398258 LARP1Q6PKG0 1096 aaKnown RBP5.47□□□□□ -1.53
CD47-203ENST00000398258 ZAR1Q86SH2 424 aa5.47□□□□□ -1.53
CD47-203ENST00000398258 SLC7A3Q8WY07 619 aa5.47□□□□□ -1.53
CD47-203ENST00000398258 PSPNO60542 156 aa5.46□□□□□ -1.54
CD47-203ENST00000398258 SCNN1AP37088 669 aa5.46□□□□□ -1.54
CD47-203ENST00000398258 CAPN12Q6ZSI9 719 aa5.46□□□□□ -1.54
CD47-203ENST00000398258 C2CD4AQ8NCU7 369 aaPredicted RBP5.46□□□□□ -1.54
CD47-203ENST00000398258 BCL7CQ8WUZ0 217 aaPredicted RBP5.46□□□□□ -1.54
CD47-203ENST00000398258 SPACA7Q96KW9 195 aa5.46□□□□□ -1.54
CD47-203ENST00000398258 OSGEPQ9NPF4 335 aa5.46□□□□□ -1.54
CD47-203ENST00000398258 KANSL3Q9P2N6 904 aa5.46□□□□□ -1.54
CD47-203ENST00000398258 UBTFP17480 764 aaKnown RBP5.45□□□□□ -1.54
CD47-203ENST00000398258 C12orf50Q8NA57 414 aaPredicted RBP5.45□□□□□ -1.54
CD47-203ENST00000398258 SMG8Q8ND04 991 aaKnown RBP5.45□□□□□ -1.54
CD47-203ENST00000398258 AGBL5Q8NDL9 886 aa5.45□□□□□ -1.54
CD47-203ENST00000398258 WNT8BQ93098 351 aa5.45□□□□□ -1.54
CD47-203ENST00000398258 TBC1D32Q96NH3 1257 aa5.45□□□□□ -1.54
CD47-203ENST00000398258 CNTN3Q9P232 1028 aa5.45□□□□□ -1.54
CD47-203ENST00000398258 SOX13Q9UN79 622 aa5.45□□□□□ -1.54
CD47-203ENST00000398258 LOC100289279A0A1B0GTE1 492 aa5.44□□□□□ -1.54
CD47-203ENST00000398258 FAM196BA6NMK8 535 aa5.44□□□□□ -1.54
CD47-203ENST00000398258 ZBTB39O15060 712 aa5.44□□□□□ -1.54
CD47-203ENST00000398258 MESP2Q0VG99 397 aa5.44□□□□□ -1.54
CD47-203ENST00000398258 KRTAP19-4Q3LI73 84 aa5.44□□□□□ -1.54
CD47-203ENST00000398258 C1QL4Q86Z23 238 aa5.44□□□□□ -1.54
CD47-203ENST00000398258 FNBP4Q8N3X1 1017 aaPredicted RBP5.44□□□□□ -1.54
CD47-203ENST00000398258 GLIS3Q8NEA6 775 aa5.44□□□□□ -1.54
CD47-203ENST00000398258 GIMAP7Q8NHV1 300 aa5.44□□□□□ -1.54
CD47-203ENST00000398258 VTI1AQ96AJ9 217 aa5.44□□□□□ -1.54
CD47-203ENST00000398258 METTL22Q9BUU2 404 aaPredicted RBP5.44□□□□□ -1.54
CD47-203ENST00000398258 SUGCTQ9HAC7 445 aa5.44□□□□□ -1.54
CD47-203ENST00000398258 TMEM63CQ9P1W3 806 aa5.44□□□□□ -1.54
CD47-203ENST00000398258 ADAMTS6Q9UKP5 1117 aa5.44□□□□□ -1.54
CD47-203ENST00000398258 SUPT5HO00267 1087 aaKnown RBP5.43□□□□□ -1.54
CD47-203ENST00000398258 SOX1O00570 391 aaPredicted RBP5.43□□□□□ -1.54
CD47-203ENST00000398258 FARP2O94887 1054 aaPredicted RBP5.43□□□□□ -1.54
CD47-203ENST00000398258 NUTM2GQ5VZR2 741 aa5.43□□□□□ -1.54
CD47-203ENST00000398258 PAOXQ6QHF9 649 aa5.43□□□□□ -1.54
CD47-203ENST00000398258 ZNF765Q7L2R6 523 aa5.43□□□□□ -1.54
CD47-203ENST00000398258 EZH1Q92800 747 aaPredicted RBP5.43□□□□□ -1.54
CD47-203ENST00000398258 CLUAP1Q96AJ1 413 aa5.43□□□□□ -1.54
CD47-203ENST00000398258 LRRC4CQ9HCJ2 640 aa5.43□□□□□ -1.54
CD47-203ENST00000398258 RAD21O60216 631 aa5.42□□□□□ -1.54
CD47-203ENST00000398258 BNIP3Q12983 259 aa5.42□□□□□ -1.54
CD47-203ENST00000398258 TTC39BQ5VTQ0 682 aaPredicted RBP5.42□□□□□ -1.54
CD47-203ENST00000398258 LCNL1Q6ZST4 164 aa5.42□□□□□ -1.54
CD47-203ENST00000398258 VN1R5Q7Z5H4 357 aa5.42□□□□□ -1.54
CD47-203ENST00000398258 NCAPG2Q86XI2 1143 aa5.42□□□□□ -1.54
CD47-203ENST00000398258 WWC1Q8IX03 1113 aa5.42□□□□□ -1.54
CD47-203ENST00000398258 GLMNQ92990 594 aa5.42□□□□□ -1.54
CD47-203ENST00000398258 PRIMPOLQ96LW4 560 aa5.42□□□□□ -1.54
CD47-203ENST00000398258 DZANK1Q9NVP4 752 aa5.42□□□□□ -1.54
CD47-203ENST00000398258 ABI2Q9NYB9 513 aaPredicted RBP5.42□□□□□ -1.54
CD47-203ENST00000398258 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.42□□□□□ -1.54
CD47-203ENST00000398258 SALL4Q9UJQ4 1053 aa5.42□□□□□ -1.54
CD47-203ENST00000398258 C19orf57Q0VDD7 668 aa5.41□□□□□ -1.54
CD47-203ENST00000398258 PLCL1Q15111 1095 aa5.41□□□□□ -1.54
CD47-203ENST00000398258 GPR152Q8TDT2 470 aa5.41□□□□□ -1.54
CD47-203ENST00000398258 FAM168AQ92567 244 aa5.41□□□□□ -1.54
CD47-203ENST00000398258 CSRNP1Q96S65 589 aa5.41□□□□□ -1.54
CD47-203ENST00000398258 USP26Q9BXU7 913 aa5.41□□□□□ -1.54
CD47-203ENST00000398258 C1orf115Q9H7X2 142 aa5.41□□□□□ -1.54
CD47-203ENST00000398258 MBNL3Q9NUK0 354 aaKnown RBP5.41□□□□□ -1.54
CD47-203ENST00000398258 U3KQE9 123 aa5.41□□□□□ -1.54
CD47-203ENST00000398258 DYNC1LI2O43237 492 aaPredicted RBP5.4□□□□□ -1.54
CD47-203ENST00000398258 RNASE1P07998 156 aaKnown RBP5.4□□□□□ -1.54
CD47-203ENST00000398258 CD96P40200 585 aa5.4□□□□□ -1.54
CD47-203ENST00000398258 ZAP70P43403 619 aa5.4□□□□□ -1.54
CD47-203ENST00000398258 OCLNQ16625 522 aa5.4□□□□□ -1.54
CD47-203ENST00000398258 PIK3R5Q8WYR1 880 aa5.4□□□□□ -1.54
CD47-203ENST00000398258 PPP1R12CQ9BZL4 782 aa5.4□□□□□ -1.54
CD47-203ENST00000398258 PDE2AO00408 941 aaPredicted RBP5.39□□□□□ -1.55
CD47-203ENST00000398258 CTSBP07858 339 aa5.39□□□□□ -1.55
CD47-203ENST00000398258 BRD2P25440 801 aaKnown RBP5.39□□□□□ -1.55
CD47-203ENST00000398258 CFPP27918 469 aa5.39□□□□□ -1.55
CD47-203ENST00000398258 USP11P51784 963 aa5.39□□□□□ -1.55
CD47-203ENST00000398258 CABP4P57796 275 aa5.39□□□□□ -1.55
CD47-203ENST00000398258 ATG4DQ86TL0 474 aaPredicted RBP5.39□□□□□ -1.55
CD47-203ENST00000398258 PROSER2Q86WR7 435 aaPredicted RBP5.39□□□□□ -1.55
CD47-203ENST00000398258 NRSN2Q9GZP1 204 aa5.39□□□□□ -1.55
CD47-203ENST00000398258 SLC5A6Q9Y289 635 aa5.39□□□□□ -1.55
CD47-203ENST00000398258 ACTL7BQ9Y614 415 aa5.39□□□□□ -1.55
CD47-203ENST00000398258 NFICP08651 508 aa5.38□□□□□ -1.55
CD47-203ENST00000398258 SOX4Q06945 474 aaPredicted RBP5.38□□□□□ -1.55
CD47-203ENST00000398258 C16orf46Q6P387 395 aa5.38□□□□□ -1.55
CD47-203ENST00000398258 SEZ6L2Q6UXD5 910 aa5.38□□□□□ -1.55
CD47-203ENST00000398258 KSR1Q8IVT5 923 aa5.38□□□□□ -1.55
CD47-203ENST00000398258 C1orf127Q8N9H9 656 aa5.38□□□□□ -1.55
CD47-203ENST00000398258 SEMA6CQ9H3T2 930 aa5.38□□□□□ -1.55
CD47-203ENST00000398258 ELP3Q9H9T3 547 aa5.38□□□□□ -1.55
CD47-203ENST00000398258 CYP4F12Q9HCS2 524 aa5.38□□□□□ -1.55
CD47-203ENST00000398258 C1GALT1Q9NS00 363 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms