RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 LMOD1P29536 600 aaPredicted RBP31.2■■■□□ 2.59
TMEM55B-202ENST00000398020 LRRCC1Q9C099 1032 aa31.2■■■□□ 2.59
TMEM55B-202ENST00000398020 GPRC5DQ9NZD1 345 aa31.2■■■□□ 2.59
TMEM55B-202ENST00000398020 DBNLQ9UJU6 430 aaKnown RBP31.2■■■□□ 2.59
TMEM55B-202ENST00000398020 CLASRPQ8N2M8 674 aaKnown RBP31.19■■■□□ 2.58
TMEM55B-202ENST00000398020 GNL3LQ9NVN8 582 aaKnown RBP31.19■■■□□ 2.58
TMEM55B-202ENST00000398020 HACL1Q9UJ83 578 aa31.19■■■□□ 2.58
TMEM55B-202ENST00000398020 SCN4AP35499 1836 aa31.19■■■□□ 2.58
TMEM55B-202ENST00000398020 MYH13Q9UKX3 1938 aa31.19■■■□□ 2.58
TMEM55B-202ENST00000398020 CERS5Q8N5B7 392 aa31.19■■■□□ 2.58
TMEM55B-202ENST00000398020 CNOT7Q9UIV1 285 aaKnown RBP31.19■■■□□ 2.58
TMEM55B-202ENST00000398020 COL1A1P02452 1464 aaPredicted RBP31.18■■■□□ 2.58
TMEM55B-202ENST00000398020 FAM205AQ6ZU69 1335 aa31.18■■■□□ 2.58
TMEM55B-202ENST00000398020 IQCA1LA6NCM1 817 aa31.18■■■□□ 2.58
TMEM55B-202ENST00000398020 RPS12P25398 132 aaKnown RBP31.18■■■□□ 2.58
TMEM55B-202ENST00000398020 KIF3CO14782 793 aa31.17■■■□□ 2.58
TMEM55B-202ENST00000398020 IGHDP01880 384 aa31.17■■■□□ 2.58
TMEM55B-202ENST00000398020 MICALL2Q8IY33 904 aa31.17■■■□□ 2.58
TMEM55B-202ENST00000398020 AGBL3Q8NEM8 1001 aa31.17■■■□□ 2.58
TMEM55B-202ENST00000398020 GMLQ99445 158 aa31.17■■■□□ 2.58
TMEM55B-202ENST00000398020 DPF2Q92785 391 aa31.16■■■□□ 2.58
TMEM55B-202ENST00000398020 RWDD1Q9H446 243 aaPredicted RBP31.16■■■□□ 2.58
TMEM55B-202ENST00000398020 TAF1DQ9H5J8 278 aaPredicted RBP31.16■■■□□ 2.58
TMEM55B-202ENST00000398020 EPHX2P34913 555 aa31.16■■■□□ 2.58
TMEM55B-202ENST00000398020 RASGRF1Q13972 1273 aa31.16■■■□□ 2.58
TMEM55B-202ENST00000398020 MFSD14BQ5SR56 506 aa31.16■■■□□ 2.58
TMEM55B-202ENST00000398020 KIAA0825Q8IV33 1275 aa31.15■■■□□ 2.58
TMEM55B-202ENST00000398020 MYO3BQ8WXR4 1341 aa31.14■■■□□ 2.58
TMEM55B-202ENST00000398020 F8W031 263 aaPredicted RBP31.13■■■□□ 2.57
TMEM55B-202ENST00000398020 IFIT2P09913 472 aaKnown RBP31.13■■■□□ 2.57
TMEM55B-202ENST00000398020 CCDC158Q5M9N0 1113 aa31.13■■■□□ 2.57
TMEM55B-202ENST00000398020 TTC39AQ5SRH9 613 aa31.13■■■□□ 2.57
TMEM55B-202ENST00000398020 SCARF1Q14162 830 aa31.13■■■□□ 2.57
TMEM55B-202ENST00000398020 PI16Q6UXB8 463 aa31.13■■■□□ 2.57
TMEM55B-202ENST00000398020 H7C1D1 291 aa31.12■■■□□ 2.57
TMEM55B-202ENST00000398020 USP17L8P0C7I0 530 aa31.12■■■□□ 2.57
TMEM55B-202ENST00000398020 EAPPQ56P03 285 aaPredicted RBP31.12■■■□□ 2.57
TMEM55B-202ENST00000398020 DENND2AQ9ULE3 1009 aa31.12■■■□□ 2.57
TMEM55B-202ENST00000398020 SEMA3EO15041 775 aa31.11■■■□□ 2.57
TMEM55B-202ENST00000398020 POTEIP0CG38 1075 aa31.11■■■□□ 2.57
TMEM55B-202ENST00000398020 POTEJP0CG39 1038 aa31.11■■■□□ 2.57
TMEM55B-202ENST00000398020 ARID4AP29374 1257 aaPredicted RBP31.11■■■□□ 2.57
TMEM55B-202ENST00000398020 GRIK5Q16478 980 aa31.11■■■□□ 2.57
TMEM55B-202ENST00000398020 SAMD7Q7Z3H4 446 aa31.11■■■□□ 2.57
TMEM55B-202ENST00000398020 GCC1Q96CN9 775 aa31.11■■■□□ 2.57
TMEM55B-202ENST00000398020 EGFRP00533 1210 aa31.1■■■□□ 2.57
TMEM55B-202ENST00000398020 NEFLP07196 543 aa31.1■■■□□ 2.57
TMEM55B-202ENST00000398020 RBM26Q5T8P6 1007 aaKnown RBP31.1■■■□□ 2.57
TMEM55B-202ENST00000398020 C16orf71Q8IYS4 520 aaPredicted RBP31.1■■■□□ 2.57
TMEM55B-202ENST00000398020 ADARB2Q9NS39 739 aaKnown RBP31.1■■■□□ 2.57
TMEM55B-202ENST00000398020 HMG20BQ9P0W2 317 aa31.1■■■□□ 2.57
TMEM55B-202ENST00000398020 MCAMP43121 646 aa31.09■■■□□ 2.57
TMEM55B-202ENST00000398020 FKBP1AP62942 108 aaKnown RBP31.09■■■□□ 2.57
TMEM55B-202ENST00000398020 TBC1D10BQ4KMP7 808 aaPredicted RBP31.09■■■□□ 2.57
TMEM55B-202ENST00000398020 TRPM4Q8TD43 1214 aa31.09■■■□□ 2.57
TMEM55B-202ENST00000398020 UQCRFS1P1P0C7P4 283 aa31.09■■■□□ 2.57
TMEM55B-202ENST00000398020 ANKRD45Q5TZF3 282 aa31.09■■■□□ 2.57
TMEM55B-202ENST00000398020 WDR66Q8TBY9 1149 aa31.09■■■□□ 2.57
TMEM55B-202ENST00000398020 TBC1D22AQ8WUA7 517 aa31.09■■■□□ 2.57
TMEM55B-202ENST00000398020 SNRKQ9NRH2 765 aa31.09■■■□□ 2.57
TMEM55B-202ENST00000398020 OGFOD1Q8N543 542 aa31.08■■■□□ 2.57
TMEM55B-202ENST00000398020 SPATA5Q8NB90 893 aa31.08■■■□□ 2.57
TMEM55B-202ENST00000398020 B4GALNT3Q6L9W6 998 aa31.07■■■□□ 2.56
TMEM55B-202ENST00000398020 ZNF280AP59817 542 aaPredicted RBP31.06■■■□□ 2.56
TMEM55B-202ENST00000398020 HIRAP54198 1017 aaPredicted RBP31.06■■■□□ 2.56
TMEM55B-202ENST00000398020 PNMA8AQ86V59 439 aaPredicted RBP31.06■■■□□ 2.56
TMEM55B-202ENST00000398020 SMC5Q8IY18 1101 aa31.06■■■□□ 2.56
TMEM55B-202ENST00000398020 MYOZ2Q9NPC6 264 aa31.06■■■□□ 2.56
TMEM55B-202ENST00000398020 TTF2Q9UNY4 1162 aaKnown RBP31.06■■■□□ 2.56
TMEM55B-202ENST00000398020 AKAP11Q9UKA4 1901 aa31.04■■■□□ 2.56
TMEM55B-202ENST00000398020 KIF4BQ2VIQ3 1234 aa31.04■■■□□ 2.56
TMEM55B-202ENST00000398020 USP50Q70EL3 339 aaPredicted RBP31.04■■■□□ 2.56
TMEM55B-202ENST00000398020 ZNF512BQ96KM6 892 aaPredicted RBP31.04■■■□□ 2.56
TMEM55B-202ENST00000398020 ABCF2Q9UG63 623 aa31.04■■■□□ 2.56
TMEM55B-202ENST00000398020 HDAC9Q9UKV0 1011 aa31.04■■■□□ 2.56
TMEM55B-202ENST00000398020 CLEC11AQ9Y240 323 aa31.04■■■□□ 2.56
TMEM55B-202ENST00000398020 NDUFB9Q9Y6M9 179 aa31.04■■■□□ 2.56
TMEM55B-202ENST00000398020 PDS5AQ29RF7 1337 aaKnown RBP31.03■■■□□ 2.56
TMEM55B-202ENST00000398020 ZBTB22O15209 634 aa31.03■■■□□ 2.56
TMEM55B-202ENST00000398020 PRDX5P30044 214 aa31.03■■■□□ 2.56
TMEM55B-202ENST00000398020 TBC1D9Q6ZT07 1266 aa31.03■■■□□ 2.56
TMEM55B-202ENST00000398020 ZBTB47Q9UFB7 747 aaPredicted RBP31.03■■■□□ 2.56
TMEM55B-202ENST00000398020 SALL1Q9NSC2 1324 aa31.02■■■□□ 2.56
TMEM55B-202ENST00000398020 ZAP70P43403 619 aa31.02■■■□□ 2.56
TMEM55B-202ENST00000398020 OTUD7AQ8TE49 926 aaPredicted RBP31.02■■■□□ 2.56
TMEM55B-202ENST00000398020 PCDHAC2Q9Y5I4 1007 aa31.02■■■□□ 2.56
TMEM55B-202ENST00000398020 TOMM70O94826 608 aa31.01■■■□□ 2.55
TMEM55B-202ENST00000398020 ADAMTSL1Q8N6G6 1762 aa31.01■■■□□ 2.55
TMEM55B-202ENST00000398020 LDHBP07195 334 aaKnown RBP31■■■□□ 2.55
TMEM55B-202ENST00000398020 TSHZ3Q63HK5 1081 aa31■■■□□ 2.55
TMEM55B-202ENST00000398020 LDHDQ86WU2 507 aa31■■■□□ 2.55
TMEM55B-202ENST00000398020 LNPKQ9C0E8 428 aa31■■■□□ 2.55
TMEM55B-202ENST00000398020 ASTN2O75129 1339 aaPredicted RBP30.99■■■□□ 2.55
TMEM55B-202ENST00000398020 CYP2E1P05181 493 aaPredicted RBP30.99■■■□□ 2.55
TMEM55B-202ENST00000398020 RBM5P52756 815 aaKnown RBP eCLIP30.99■■■□□ 2.55
TMEM55B-202ENST00000398020 NBPF9Q3BBW0 867 aa30.98■■■□□ 2.55
TMEM55B-202ENST00000398020 CFAP100Q494V2 611 aa30.98■■■□□ 2.55
TMEM55B-202ENST00000398020 ZGPATQ8N5A5 531 aaKnown RBP30.98■■■□□ 2.55
TMEM55B-202ENST00000398020 SUGT1Q9Y2Z0 365 aa30.98■■■□□ 2.55
TMEM55B-202ENST00000398020 DLGAP5Q15398 846 aa30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms