RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 UBE4AQ14139 1066 aa23.74■■□□□ 1.39
MCF2L-207ENST00000397024 SMC4Q9NTJ3 1288 aa23.74■■□□□ 1.39
MCF2L-207ENST00000397024 HDAC9Q9UKV0 1011 aa23.74■■□□□ 1.39
MCF2L-207ENST00000397024 GYG1P46976 350 aa23.73■■□□□ 1.39
MCF2L-207ENST00000397024 LRRC24Q50LG9 513 aa23.73■■□□□ 1.39
MCF2L-207ENST00000397024 FAM84BQ96KN1 310 aaPredicted RBP23.73■■□□□ 1.39
MCF2L-207ENST00000397024 F8W031 263 aaPredicted RBP23.72■■□□□ 1.39
MCF2L-207ENST00000397024 UBE2Q2LH0YL09 131 aa23.72■■□□□ 1.39
MCF2L-207ENST00000397024 SLC10A3P09131 477 aa23.72■■□□□ 1.39
MCF2L-207ENST00000397024 TDRD7Q8NHU6 1098 aaKnown RBP23.72■■□□□ 1.39
MCF2L-207ENST00000397024 KLHDC4Q8TBB5 520 aa23.72■■□□□ 1.39
MCF2L-207ENST00000397024 CA12O43570 354 aa23.71■■□□□ 1.39
MCF2L-207ENST00000397024 FKBP1BP68106 108 aa23.71■■□□□ 1.39
MCF2L-207ENST00000397024 AOX1Q06278 1338 aa23.7■■□□□ 1.38
MCF2L-207ENST00000397024 FAM205AQ6ZU69 1335 aa23.7■■□□□ 1.38
MCF2L-207ENST00000397024 HIBADHP31937 336 aaKnown RBP23.7■■□□□ 1.38
MCF2L-207ENST00000397024 FKBP1AP62942 108 aaKnown RBP23.7■■□□□ 1.38
MCF2L-207ENST00000397024 DLGAP5Q15398 846 aa23.7■■□□□ 1.38
MCF2L-207ENST00000397024 MTMR14Q8NCE2 650 aa23.7■■□□□ 1.38
MCF2L-207ENST00000397024 CSRNP1Q96S65 589 aa23.7■■□□□ 1.38
MCF2L-207ENST00000397024 CASP8AP2Q9UKL3 1982 aa23.7■■□□□ 1.38
MCF2L-207ENST00000397024 MROH5Q6ZUA9 1318 aa23.69■■□□□ 1.38
MCF2L-207ENST00000397024 RASAL3Q86YV0 1011 aa23.69■■□□□ 1.38
MCF2L-207ENST00000397024 PRMT6Q96LA8 375 aaPredicted RBP23.69■■□□□ 1.38
MCF2L-207ENST00000397024 NOB1Q9ULX3 412 aaKnown RBP23.69■■□□□ 1.38
MCF2L-207ENST00000397024 PAPPA2Q9BXP8 1791 aa23.69■■□□□ 1.38
MCF2L-207ENST00000397024 CFAP100Q494V2 611 aa23.68■■□□□ 1.38
MCF2L-207ENST00000397024 FBXO33Q7Z6M2 555 aa23.68■■□□□ 1.38
MCF2L-207ENST00000397024 VGLL2Q8N8G2 317 aa23.68■■□□□ 1.38
MCF2L-207ENST00000397024 RFX5P48382 616 aaPredicted RBP23.67■■□□□ 1.38
MCF2L-207ENST00000397024 METTL24Q5JXM2 366 aa23.67■■□□□ 1.38
MCF2L-207ENST00000397024 APOBEC3FQ8IUX4 373 aaKnown RBP23.67■■□□□ 1.38
MCF2L-207ENST00000397024 SPDYE2BA6NHP3 402 aa23.66■■□□□ 1.38
MCF2L-207ENST00000397024 CT47B1P0C2W7 299 aaPredicted RBP23.66■■□□□ 1.38
MCF2L-207ENST00000397024 SPDYE6P0CI01 402 aa23.66■■□□□ 1.38
MCF2L-207ENST00000397024 TTLL12Q14166 644 aaPredicted RBP23.66■■□□□ 1.38
MCF2L-207ENST00000397024 DEFB129Q9H1M3 183 aa23.66■■□□□ 1.38
MCF2L-207ENST00000397024 RNF186Q9NXI6 227 aa23.66■■□□□ 1.38
MCF2L-207ENST00000397024 CLRN2A0PK11 232 aa23.65■■□□□ 1.38
MCF2L-207ENST00000397024 PDE8BO95263 885 aa23.65■■□□□ 1.38
MCF2L-207ENST00000397024 PRKG1Q13976 671 aa23.65■■□□□ 1.38
MCF2L-207ENST00000397024 GRIK5Q16478 980 aa23.65■■□□□ 1.38
MCF2L-207ENST00000397024 MFSD14BQ5SR56 506 aa23.65■■□□□ 1.38
MCF2L-207ENST00000397024 ABHD8Q96I13 439 aa23.65■■□□□ 1.38
MCF2L-207ENST00000397024 FZD1Q9UP38 647 aa23.65■■□□□ 1.38
MCF2L-207ENST00000397024 IQSEC3Q9UPP2 1182 aaPredicted RBP23.65■■□□□ 1.38
MCF2L-207ENST00000397024 TRPA1O75762 1119 aa23.64■■□□□ 1.37
MCF2L-207ENST00000397024 RARSP54136 660 aaKnown RBP23.64■■□□□ 1.37
MCF2L-207ENST00000397024 PTPN12Q05209 780 aaKnown RBP23.64■■□□□ 1.37
MCF2L-207ENST00000397024 NF2P35240 595 aa23.63■■□□□ 1.37
MCF2L-207ENST00000397024 BCAMP50895 628 aa23.62■■□□□ 1.37
MCF2L-207ENST00000397024 RBM5P52756 815 aaKnown RBP eCLIP23.62■■□□□ 1.37
MCF2L-207ENST00000397024 TTF2Q9UNY4 1162 aaKnown RBP23.62■■□□□ 1.37
MCF2L-207ENST00000397024 FGFR2P21802 821 aa23.61■■□□□ 1.37
MCF2L-207ENST00000397024 LDLRAD1Q5T700 205 aa23.61■■□□□ 1.37
MCF2L-207ENST00000397024 ATG9AQ7Z3C6 839 aa23.61■■□□□ 1.37
MCF2L-207ENST00000397024 API5Q9BZZ5 524 aaKnown RBP23.61■■□□□ 1.37
MCF2L-207ENST00000397024 SAGE1Q9NXZ1 904 aa23.61■■□□□ 1.37
MCF2L-207ENST00000397024 AKAP11Q9UKA4 1901 aa23.61■■□□□ 1.37
MCF2L-207ENST00000397024 EYA2O00167 538 aa23.6■■□□□ 1.37
MCF2L-207ENST00000397024 UBTFL1P0CB47 393 aaPredicted RBP23.6■■□□□ 1.37
MCF2L-207ENST00000397024 CHAF1AQ13111 956 aaPredicted RBP23.6■■□□□ 1.37
MCF2L-207ENST00000397024 ARMC9Q7Z3E5 817 aa23.6■■□□□ 1.37
MCF2L-207ENST00000397024 VPS37DQ86XT2 251 aa23.6■■□□□ 1.37
MCF2L-207ENST00000397024 VEZTQ9HBM0 779 aa23.6■■□□□ 1.37
MCF2L-207ENST00000397024 ANGEL1Q9UNK9 670 aaKnown RBP23.6■■□□□ 1.37
MCF2L-207ENST00000397024 ECM29Q5VYK3 1845 aa23.6■■□□□ 1.37
MCF2L-207ENST00000397024 MYO1BO43795 1136 aa23.59■■□□□ 1.37
MCF2L-207ENST00000397024 MKRN3Q13064 507 aaKnown RBP23.59■■□□□ 1.37
MCF2L-207ENST00000397024 CAVIN4Q5BKX8 364 aa23.59■■□□□ 1.37
MCF2L-207ENST00000397024 SERPINA10Q9UK55 444 aa23.59■■□□□ 1.37
MCF2L-207ENST00000397024 SSC5DA1L4H1 1573 aa23.59■■□□□ 1.37
MCF2L-207ENST00000397024 NBPF12Q5TAG4 269 aaPredicted RBP23.58■■□□□ 1.37
MCF2L-207ENST00000397024 MCOLN1Q9GZU1 580 aa23.58■■□□□ 1.37
MCF2L-207ENST00000397024 TDRD3Q9H7E2 651 aaKnown RBP23.58■■□□□ 1.37
MCF2L-207ENST00000397024 ZNF70Q9UC06 446 aaPredicted RBP23.58■■□□□ 1.37
MCF2L-207ENST00000397024 LRRFIP2Q9Y608 721 aaKnown RBP23.58■■□□□ 1.37
MCF2L-207ENST00000397024 COL1A1P02452 1464 aaPredicted RBP23.57■■□□□ 1.36
MCF2L-207ENST00000397024 RASA3Q14644 834 aa23.57■■□□□ 1.36
MCF2L-207ENST00000397024 PUM3Q15397 648 aaKnown RBP23.57■■□□□ 1.36
MCF2L-207ENST00000397024 REM2Q8IYK8 340 aaPredicted RBP23.57■■□□□ 1.36
MCF2L-207ENST00000397024 DZIP1LQ8IYY4 767 aaKnown RBP23.57■■□□□ 1.36
MCF2L-207ENST00000397024 MIER1Q8N108 512 aa23.57■■□□□ 1.36
MCF2L-207ENST00000397024 MEIS3Q99687 375 aa23.57■■□□□ 1.36
MCF2L-207ENST00000397024 SIL1Q9H173 461 aa23.57■■□□□ 1.36
MCF2L-207ENST00000397024 PPP2R3BQ9Y5P8 575 aa23.57■■□□□ 1.36
MCF2L-207ENST00000397024 FRAT2O75474 233 aaPredicted RBP23.56■■□□□ 1.36
MCF2L-207ENST00000397024 CRKP46108 304 aa23.56■■□□□ 1.36
MCF2L-207ENST00000397024 SPDYE2Q495Y8 402 aa23.56■■□□□ 1.36
MCF2L-207ENST00000397024 IFIT1P09914 478 aaKnown RBP23.55■■□□□ 1.36
MCF2L-207ENST00000397024 TM4SF4P48230 202 aa23.55■■□□□ 1.36
MCF2L-207ENST00000397024 DGKZQ13574 1117 aa23.55■■□□□ 1.36
MCF2L-207ENST00000397024 MAP3K11Q16584 847 aa23.55■■□□□ 1.36
MCF2L-207ENST00000397024 ARHGAP45Q92619 1136 aa23.55■■□□□ 1.36
MCF2L-207ENST00000397024 CLMNQ96JQ2 1002 aa23.55■■□□□ 1.36
MCF2L-207ENST00000397024 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.55■■□□□ 1.36
MCF2L-207ENST00000397024 PA2G4Q9UQ80 394 aaKnown RBP23.55■■□□□ 1.36
MCF2L-207ENST00000397024 TNNQ9UQP3 1299 aa23.55■■□□□ 1.36
MCF2L-207ENST00000397024 USP2O75604 605 aaPredicted RBP23.54■■□□□ 1.36
MCF2L-207ENST00000397024 SUPT20HL1Q3ZLR7 823 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms