RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 CENPBP07199 599 aaPredicted RBP36.17■■■■□ 3.38
CHCHD4-202ENST00000396914 RHPN1Q8TCX5 695 aa36.17■■■■□ 3.38
CHCHD4-202ENST00000396914 KIF1BPQ96EK5 621 aa36.17■■■■□ 3.38
CHCHD4-202ENST00000396914 PHKA1P46020 1223 aa36.17■■■■□ 3.38
CHCHD4-202ENST00000396914 IL1RAPL2Q9NP60 686 aa36.17■■■■□ 3.38
CHCHD4-202ENST00000396914 ARAP2Q8WZ64 1704 aa36.16■■■■□ 3.38
CHCHD4-202ENST00000396914 MYO3BQ8WXR4 1341 aa36.16■■■■□ 3.38
CHCHD4-202ENST00000396914 SHTN1A0MZ66 631 aa36.16■■■■□ 3.38
CHCHD4-202ENST00000396914 CCDC102BQ68D86 513 aa36.16■■■■□ 3.38
CHCHD4-202ENST00000396914 ADARB2Q9NS39 739 aaKnown RBP36.15■■■■□ 3.38
CHCHD4-202ENST00000396914 CLEC11AQ9Y240 323 aa36.15■■■■□ 3.38
CHCHD4-202ENST00000396914 PNMA8AQ86V59 439 aaPredicted RBP36.14■■■■□ 3.38
CHCHD4-202ENST00000396914 USP17L8P0C7I0 530 aa36.13■■■■□ 3.37
CHCHD4-202ENST00000396914 RBM26Q5T8P6 1007 aaKnown RBP36.13■■■■□ 3.37
CHCHD4-202ENST00000396914 AACSQ86V21 672 aa36.13■■■■□ 3.37
CHCHD4-202ENST00000396914 CCDC8Q9H0W5 538 aaPredicted RBP36.13■■■■□ 3.37
CHCHD4-202ENST00000396914 KIAA0825Q8IV33 1275 aa36.12■■■■□ 3.37
CHCHD4-202ENST00000396914 OGFOD1Q8N543 542 aa36.12■■■■□ 3.37
CHCHD4-202ENST00000396914 FAM205AQ6ZU69 1335 aa36.12■■■■□ 3.37
CHCHD4-202ENST00000396914 MFSD14BQ5SR56 506 aa36.11■■■■□ 3.37
CHCHD4-202ENST00000396914 CLASRPQ8N2M8 674 aaKnown RBP36.11■■■■□ 3.37
CHCHD4-202ENST00000396914 DBNDD2Q9BQY9 259 aa36.11■■■■□ 3.37
CHCHD4-202ENST00000396914 F8W031 263 aaPredicted RBP36.1■■■■□ 3.37
CHCHD4-202ENST00000396914 TOMM70O94826 608 aa36.1■■■■□ 3.37
CHCHD4-202ENST00000396914 EAF2Q96CJ1 260 aaPredicted RBP36.1■■■■□ 3.37
CHCHD4-202ENST00000396914 GMLQ99445 158 aa36.1■■■■□ 3.37
CHCHD4-202ENST00000396914 DCTPP1Q9H773 170 aa36.1■■■■□ 3.37
CHCHD4-202ENST00000396914 TBC1D10BQ4KMP7 808 aaPredicted RBP36.09■■■■□ 3.37
CHCHD4-202ENST00000396914 CCDC158Q5M9N0 1113 aa36.09■■■■□ 3.37
CHCHD4-202ENST00000396914 USP50Q70EL3 339 aaPredicted RBP36.09■■■■□ 3.37
CHCHD4-202ENST00000396914 SAMD7Q7Z3H4 446 aa36.09■■■■□ 3.37
CHCHD4-202ENST00000396914 CERS5Q8N5B7 392 aa36.09■■■■□ 3.37
CHCHD4-202ENST00000396914 LRRCC1Q9C099 1032 aa36.09■■■■□ 3.37
CHCHD4-202ENST00000396914 HDAC9Q9UKV0 1011 aa36.09■■■■□ 3.37
CHCHD4-202ENST00000396914 ZNF646O15015 1829 aaPredicted RBP36.09■■■■□ 3.37
CHCHD4-202ENST00000396914 MYH13Q9UKX3 1938 aa36.09■■■■□ 3.37
CHCHD4-202ENST00000396914 TTC39AQ5SRH9 613 aa36.08■■■■□ 3.37
CHCHD4-202ENST00000396914 DENND2AQ9ULE3 1009 aa36.08■■■■□ 3.37
CHCHD4-202ENST00000396914 POTEIP0CG38 1075 aa36.08■■■■□ 3.37
CHCHD4-202ENST00000396914 POTEJP0CG39 1038 aa36.08■■■■□ 3.37
CHCHD4-202ENST00000396914 FKBP1AP62942 108 aaKnown RBP36.08■■■■□ 3.37
CHCHD4-202ENST00000396914 TBC1D22AQ8WUA7 517 aa36.08■■■■□ 3.37
CHCHD4-202ENST00000396914 TLR7Q9NYK1 1049 aaKnown RBP36.08■■■■□ 3.37
CHCHD4-202ENST00000396914 SEMA3EO15041 775 aa36.07■■■■□ 3.36
CHCHD4-202ENST00000396914 IFIT2P09913 472 aaKnown RBP36.06■■■■□ 3.36
CHCHD4-202ENST00000396914 WDR66Q8TBY9 1149 aa36.06■■■■□ 3.36
CHCHD4-202ENST00000396914 TRPM4Q8TD43 1214 aa36.06■■■■□ 3.36
CHCHD4-202ENST00000396914 DBNLQ9UJU6 430 aaKnown RBP36.06■■■■□ 3.36
CHCHD4-202ENST00000396914 SMARCA5O60264 1052 aaPredicted RBP36.05■■■■□ 3.36
CHCHD4-202ENST00000396914 LDHDQ86WU2 507 aa36.05■■■■□ 3.36
CHCHD4-202ENST00000396914 RBM46Q8TBY0 533 aaKnown RBP36.05■■■■□ 3.36
CHCHD4-202ENST00000396914 UQCRFS1P1P0C7P4 283 aa36.04■■■■□ 3.36
CHCHD4-202ENST00000396914 ZNF280AP59817 542 aaPredicted RBP36.04■■■■□ 3.36
CHCHD4-202ENST00000396914 RASGRF1Q13972 1273 aa36.04■■■■□ 3.36
CHCHD4-202ENST00000396914 KIF4BQ2VIQ3 1234 aa36.04■■■■□ 3.36
CHCHD4-202ENST00000396914 RWDD1Q9H446 243 aaPredicted RBP36.04■■■■□ 3.36
CHCHD4-202ENST00000396914 MYOZ2Q9NPC6 264 aa36.04■■■■□ 3.36
CHCHD4-202ENST00000396914 HDAC1Q13547 482 aaPredicted RBP36.03■■■■□ 3.36
CHCHD4-202ENST00000396914 COL1A1P02452 1464 aaPredicted RBP36.03■■■■□ 3.36
CHCHD4-202ENST00000396914 SMC1BQ8NDV3 1235 aa36.02■■■■□ 3.36
CHCHD4-202ENST00000396914 EGFRP00533 1210 aa36.01■■■■□ 3.36
CHCHD4-202ENST00000396914 ZBTB47Q9UFB7 747 aaPredicted RBP36.01■■■■□ 3.36
CHCHD4-202ENST00000396914 TTF2Q9UNY4 1162 aaKnown RBP36.01■■■■□ 3.36
CHCHD4-202ENST00000396914 ARID4AP29374 1257 aaPredicted RBP36■■■■□ 3.35
CHCHD4-202ENST00000396914 CHADLQ6NUI6 762 aa36■■■■□ 3.35
CHCHD4-202ENST00000396914 RBM5P52756 815 aaKnown RBP eCLIP36■■■■□ 3.35
CHCHD4-202ENST00000396914 HIRAP54198 1017 aaPredicted RBP36■■■■□ 3.35
CHCHD4-202ENST00000396914 SPATA5Q8NB90 893 aa36■■■■□ 3.35
CHCHD4-202ENST00000396914 MMP14P50281 582 aa35.99■■■■□ 3.35
CHCHD4-202ENST00000396914 HMG20BQ9P0W2 317 aa35.99■■■■□ 3.35
CHCHD4-202ENST00000396914 GRIK5Q16478 980 aa35.97■■■■□ 3.35
CHCHD4-202ENST00000396914 MAP1SQ66K74 1059 aaPredicted RBP35.97■■■■□ 3.35
CHCHD4-202ENST00000396914 PI16Q6UXB8 463 aa35.97■■■■□ 3.35
CHCHD4-202ENST00000396914 GCC1Q96CN9 775 aa35.97■■■■□ 3.35
CHCHD4-202ENST00000396914 SNRKQ9NRH2 765 aa35.97■■■■□ 3.35
CHCHD4-202ENST00000396914 ABCF2Q9UG63 623 aa35.97■■■■□ 3.35
CHCHD4-202ENST00000396914 MCAMP43121 646 aa35.96■■■■□ 3.35
CHCHD4-202ENST00000396914 SCARF1Q14162 830 aa35.96■■■■□ 3.35
CHCHD4-202ENST00000396914 DLGAP5Q15398 846 aa35.96■■■■□ 3.35
CHCHD4-202ENST00000396914 ZGPATQ8N5A5 531 aaKnown RBP35.96■■■■□ 3.35
CHCHD4-202ENST00000396914 LDHBP07195 334 aaKnown RBP35.95■■■■□ 3.35
CHCHD4-202ENST00000396914 FSTL1Q12841 308 aa35.95■■■■□ 3.35
CHCHD4-202ENST00000396914 PDS5AQ29RF7 1337 aaKnown RBP35.95■■■■□ 3.34
CHCHD4-202ENST00000396914 C1QTNF8P60827 252 aa35.94■■■■□ 3.34
CHCHD4-202ENST00000396914 ANKRD45Q5TZF3 282 aa35.94■■■■□ 3.34
CHCHD4-202ENST00000396914 SUGT1Q9Y2Z0 365 aa35.94■■■■□ 3.34
CHCHD4-202ENST00000396914 NEFLP07196 543 aa35.93■■■■□ 3.34
CHCHD4-202ENST00000396914 CFAP100Q494V2 611 aa35.93■■■■□ 3.34
CHCHD4-202ENST00000396914 ZC3H15Q8WU90 426 aaKnown RBP35.93■■■■□ 3.34
CHCHD4-202ENST00000396914 SALL1Q9NSC2 1324 aa35.93■■■■□ 3.34
CHCHD4-202ENST00000396914 ADAMTSL1Q8N6G6 1762 aa35.93■■■■□ 3.34
CHCHD4-202ENST00000396914 ZBTB22O15209 634 aa35.92■■■■□ 3.34
CHCHD4-202ENST00000396914 IGHDP01880 384 aa35.92■■■■□ 3.34
CHCHD4-202ENST00000396914 ZNF512BQ96KM6 892 aaPredicted RBP35.92■■■■□ 3.34
CHCHD4-202ENST00000396914 MAST3O60307 1309 aa35.92■■■■□ 3.34
CHCHD4-202ENST00000396914 PRDX5P30044 214 aa35.91■■■■□ 3.34
CHCHD4-202ENST00000396914 NBPF9Q3BBW0 867 aa35.91■■■■□ 3.34
CHCHD4-202ENST00000396914 SPTY2D1Q68D10 685 aaPredicted RBP35.91■■■■□ 3.34
CHCHD4-202ENST00000396914 CNTROBQ8N137 903 aa35.91■■■■□ 3.34
CHCHD4-202ENST00000396914 DCPSQ96C86 337 aaKnown RBP35.91■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms