RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 HIBADHP31937 336 aaKnown RBP15.31■□□□□ 0.04
TRIM39-204ENST00000396548 RASEFQ8IZ41 740 aa15.31■□□□□ 0.04
TRIM39-204ENST00000396548 TBC1D16Q8TBP0 767 aa15.31■□□□□ 0.04
TRIM39-204ENST00000396548 WWC3Q9ULE0 1092 aa15.31■□□□□ 0.04
TRIM39-204ENST00000396548 SNX14Q9Y5W7 946 aa15.31■□□□□ 0.04
TRIM39-204ENST00000396548 KIAA1211Q6ZU35 1233 aa15.3■□□□□ 0.04
TRIM39-204ENST00000396548 C2CD5Q86YS7 1000 aa15.3■□□□□ 0.04
TRIM39-204ENST00000396548 APPBP2Q92624 585 aa15.3■□□□□ 0.04
TRIM39-204ENST00000396548 PUS7LQ9H0K6 701 aaKnown RBP15.3■□□□□ 0.04
TRIM39-204ENST00000396548 DENND2AQ9ULE3 1009 aa15.3■□□□□ 0.04
TRIM39-204ENST00000396548 BRCA1P38398 1863 aaKnown RBP15.3■□□□□ 0.04
TRIM39-204ENST00000396548 KCNJ4P48050 445 aa15.3■□□□□ 0.04
TRIM39-204ENST00000396548 LRRFIP1Q32MZ4 808 aaKnown RBP15.3■□□□□ 0.04
TRIM39-204ENST00000396548 GNL3LQ9NVN8 582 aaKnown RBP15.3■□□□□ 0.04
TRIM39-204ENST00000396548 RBM8AQ9Y5S9 174 aaKnown RBP15.3■□□□□ 0.04
TRIM39-204ENST00000396548 CCDC88AQ3V6T2 1871 aa15.3■□□□□ 0.04
TRIM39-204ENST00000396548 PDE6AP16499 860 aa15.3■□□□□ 0.04
TRIM39-204ENST00000396548 TDRD7Q8NHU6 1098 aaKnown RBP15.3■□□□□ 0.04
TRIM39-204ENST00000396548 C7orf43Q8WVR3 580 aa15.3■□□□□ 0.04
TRIM39-204ENST00000396548 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.3■□□□□ 0.04
TRIM39-204ENST00000396548 CHD4Q14839 1912 aa15.29■□□□□ 0.04
TRIM39-204ENST00000396548 LAMA4Q16363 1823 aa15.29■□□□□ 0.04
TRIM39-204ENST00000396548 MCCP23508 829 aa15.29■□□□□ 0.04
TRIM39-204ENST00000396548 TSGA10IPQ3SY00 556 aa15.29■□□□□ 0.04
TRIM39-204ENST00000396548 ZSCAN25Q6NSZ9 544 aa15.29■□□□□ 0.04
TRIM39-204ENST00000396548 DSCC1Q9BVC3 393 aa15.29■□□□□ 0.04
TRIM39-204ENST00000396548 SLC9C2Q5TAH2 1124 aa15.29■□□□□ 0.04
TRIM39-204ENST00000396548 VPS53Q5VIR6 699 aa15.29■□□□□ 0.04
TRIM39-204ENST00000396548 ZNF384Q8TF68 577 aa15.29■□□□□ 0.04
TRIM39-204ENST00000396548 GGA1Q9UJY5 639 aa15.29■□□□□ 0.04
TRIM39-204ENST00000396548 IQSEC3Q9UPP2 1182 aaPredicted RBP15.29■□□□□ 0.04
TRIM39-204ENST00000396548 H0YIN7 160 aa15.28■□□□□ 0.04
TRIM39-204ENST00000396548 IL1R1P14778 569 aa15.28■□□□□ 0.04
TRIM39-204ENST00000396548 SLC4A3P48751 1232 aa15.28■□□□□ 0.04
TRIM39-204ENST00000396548 OLFM4Q6UX06 510 aa15.28■□□□□ 0.04
TRIM39-204ENST00000396548 GPR101Q96P66 508 aaPredicted RBP15.28■□□□□ 0.04
TRIM39-204ENST00000396548 NSFL1CQ9UNZ2 370 aaKnown RBP15.28■□□□□ 0.04
TRIM39-204ENST00000396548 ZNF532Q9HCE3 1301 aa15.28■□□□□ 0.04
TRIM39-204ENST00000396548 SALL1Q9NSC2 1324 aa15.28■□□□□ 0.04
TRIM39-204ENST00000396548 KCNA3P22001 575 aa15.28■□□□□ 0.04
TRIM39-204ENST00000396548 CHRNA5P30532 468 aa15.28■□□□□ 0.04
TRIM39-204ENST00000396548 CREB3L3Q68CJ9 461 aa15.28■□□□□ 0.04
TRIM39-204ENST00000396548 SLC27A2O14975 620 aa15.28■□□□□ 0.04
TRIM39-204ENST00000396548 UFL1O94874 794 aa15.28■□□□□ 0.04
TRIM39-204ENST00000396548 RPAP1Q9BWH6 1393 aaPredicted RBP15.27■□□□□ 0.04
TRIM39-204ENST00000396548 HSPD1P10809 573 aaKnown RBP15.27■□□□□ 0.04
TRIM39-204ENST00000396548 SGIP1Q9BQI5 828 aa15.27■□□□□ 0.04
TRIM39-204ENST00000396548 TAF6LQ9Y6J9 622 aa15.27■□□□□ 0.03
TRIM39-204ENST00000396548 IDH1O75874 414 aaKnown RBP15.26■□□□□ 0.03
TRIM39-204ENST00000396548 PRPF40BQ6NWY9 871 aaKnown RBP15.26■□□□□ 0.03
TRIM39-204ENST00000396548 MAP3K12Q12852 859 aa15.26■□□□□ 0.03
TRIM39-204ENST00000396548 VPS37DQ86XT2 251 aa15.26■□□□□ 0.03
TRIM39-204ENST00000396548 BECN1Q14457 450 aa15.26■□□□□ 0.03
TRIM39-204ENST00000396548 ADGRA1Q86SQ6 560 aa15.26■□□□□ 0.03
TRIM39-204ENST00000396548 MAGEB6Q8N7X4 407 aa15.26■□□□□ 0.03
TRIM39-204ENST00000396548 IL27Q8NEV9 243 aa15.26■□□□□ 0.03
TRIM39-204ENST00000396548 RTFDC1Q9BY42 306 aaPredicted RBP15.26■□□□□ 0.03
TRIM39-204ENST00000396548 U3KPZ7 1027 aaPredicted RBP15.26■□□□□ 0.03
TRIM39-204ENST00000396548 ADCK5Q3MIX3 580 aa15.25■□□□□ 0.03
TRIM39-204ENST00000396548 ZNF804AQ7Z570 1209 aa15.25■□□□□ 0.03
TRIM39-204ENST00000396548 TM6SF1Q9BZW5 370 aa15.25■□□□□ 0.03
TRIM39-204ENST00000396548 MTFR1LQ9H019 292 aa15.25■□□□□ 0.03
TRIM39-204ENST00000396548 CD209Q9NNX6 404 aa15.25■□□□□ 0.03
TRIM39-204ENST00000396548 GPAA1O43292 621 aa15.25■□□□□ 0.03
TRIM39-204ENST00000396548 ZNF622Q969S3 477 aaKnown RBP eCLIP15.25■□□□□ 0.03
TRIM39-204ENST00000396548 TTC14Q96N46 770 aa15.25■□□□□ 0.03
TRIM39-204ENST00000396548 WASHC4Q2M389 1173 aa15.24■□□□□ 0.03
TRIM39-204ENST00000396548 CNKSR1Q969H4 720 aa15.24■□□□□ 0.03
TRIM39-204ENST00000396548 STRBPQ96SI9 672 aaKnown RBP15.24■□□□□ 0.03
TRIM39-204ENST00000396548 IGSF3O75054 1194 aa15.24■□□□□ 0.03
TRIM39-204ENST00000396548 COL9A3Q14050 684 aaPredicted RBP15.24■□□□□ 0.03
TRIM39-204ENST00000396548 MPNDQ8N594 471 aa15.24■□□□□ 0.03
TRIM39-204ENST00000396548 ZSWIM6Q9HCJ5 1215 aa15.24■□□□□ 0.03
TRIM39-204ENST00000396548 CYP21A2P08686 494 aa15.24■□□□□ 0.03
TRIM39-204ENST00000396548 NSUN4Q96CB9 384 aaKnown RBP15.24■□□□□ 0.03
TRIM39-204ENST00000396548 ZBTB7AO95365 584 aa15.23■□□□□ 0.03
TRIM39-204ENST00000396548 TMED8Q6PL24 325 aaPredicted RBP15.23■□□□□ 0.03
TRIM39-204ENST00000396548 TIAM2Q8IVF5 1701 aa15.23■□□□□ 0.03
TRIM39-204ENST00000396548 A0A0G2JLW4 131 aa15.23■□□□□ 0.03
TRIM39-204ENST00000396548 R3HDM1Q15032 1099 aaKnown RBP15.23■□□□□ 0.03
TRIM39-204ENST00000396548 LRP2BPQ9P2M1 347 aa15.23■□□□□ 0.03
TRIM39-204ENST00000396548 ZMYM6O95789 1325 aa15.22■□□□□ 0.03
TRIM39-204ENST00000396548 FAM205AQ6ZU69 1335 aa15.22■□□□□ 0.03
TRIM39-204ENST00000396548 PSME4Q14997 1843 aa15.22■□□□□ 0.03
TRIM39-204ENST00000396548 RIOK1Q9BRS2 568 aaKnown RBP15.22■□□□□ 0.03
TRIM39-204ENST00000396548 K7ELQ4 463 aaPredicted RBP15.22■□□□□ 0.03
TRIM39-204ENST00000396548 DPP8Q6V1X1 898 aaPredicted RBP15.22■□□□□ 0.03
TRIM39-204ENST00000396548 HSCBQ8IWL3 235 aa15.22■□□□□ 0.03
TRIM39-204ENST00000396548 CDK5RAP2Q96SN8 1893 aa15.22■□□□□ 0.03
TRIM39-204ENST00000396548 DDIT3P35638 169 aa15.21■□□□□ 0.03
TRIM39-204ENST00000396548 NEK4P51957 841 aa15.21■□□□□ 0.03
TRIM39-204ENST00000396548 MECOMQ03112 1051 aa15.21■□□□□ 0.03
TRIM39-204ENST00000396548 ALX1Q15699 326 aa15.21■□□□□ 0.03
TRIM39-204ENST00000396548 WDR66Q8TBY9 1149 aa15.21■□□□□ 0.03
TRIM39-204ENST00000396548 FGAP02671 866 aa15.21■□□□□ 0.03
TRIM39-204ENST00000396548 DPEP1P16444 411 aa15.21■□□□□ 0.03
TRIM39-204ENST00000396548 PRDX5P30044 214 aa15.21■□□□□ 0.03
TRIM39-204ENST00000396548 PTGER2P43116 358 aa15.21■□□□□ 0.03
TRIM39-204ENST00000396548 GRIK5Q16478 980 aa15.21■□□□□ 0.03
TRIM39-204ENST00000396548 STOX1Q6ZVD7 989 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms