RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 HDAC9Q9UKV0 1011 aa23.02■■□□□ 1.28
FXN-203ENST00000396366 ZNF157P51786 506 aaPredicted RBP23.01■■□□□ 1.27
FXN-203ENST00000396366 UBE4AQ14139 1066 aa23.01■■□□□ 1.27
FXN-203ENST00000396366 MIER1Q8N108 512 aa23.01■■□□□ 1.27
FXN-203ENST00000396366 FAM84BQ96KN1 310 aaPredicted RBP23.01■■□□□ 1.27
FXN-203ENST00000396366 NOGQ13253 232 aa23■■□□□ 1.27
FXN-203ENST00000396366 MROH5Q6ZUA9 1318 aa23■■□□□ 1.27
FXN-203ENST00000396366 CT47B1P0C2W7 299 aaPredicted RBP22.99■■□□□ 1.27
FXN-203ENST00000396366 HIBADHP31937 336 aaKnown RBP22.99■■□□□ 1.27
FXN-203ENST00000396366 BRPF1P55201 1214 aaPredicted RBP22.99■■□□□ 1.27
FXN-203ENST00000396366 TDRD7Q8NHU6 1098 aaKnown RBP22.99■■□□□ 1.27
FXN-203ENST00000396366 MMP14P50281 582 aa22.98■■□□□ 1.27
FXN-203ENST00000396366 RARSP54136 660 aaKnown RBP22.98■■□□□ 1.27
FXN-203ENST00000396366 KIF23Q02241 960 aaPredicted RBP22.98■■□□□ 1.27
FXN-203ENST00000396366 METTL24Q5JXM2 366 aa22.98■■□□□ 1.27
FXN-203ENST00000396366 AOX1Q06278 1338 aa22.98■■□□□ 1.27
FXN-203ENST00000396366 UBE2Q2LH0YL09 131 aa22.97■■□□□ 1.27
FXN-203ENST00000396366 RFX5P48382 616 aaPredicted RBP22.97■■□□□ 1.27
FXN-203ENST00000396366 DLGAP5Q15398 846 aa22.97■■□□□ 1.27
FXN-203ENST00000396366 VGLL2Q8N8G2 317 aa22.97■■□□□ 1.27
FXN-203ENST00000396366 CCDC102AQ96A19 550 aa22.97■■□□□ 1.27
FXN-203ENST00000396366 IQSEC3Q9UPP2 1182 aaPredicted RBP22.97■■□□□ 1.27
FXN-203ENST00000396366 FKBP1AP62942 108 aaKnown RBP22.96■■□□□ 1.27
FXN-203ENST00000396366 PRMT6Q96LA8 375 aaPredicted RBP22.96■■□□□ 1.27
FXN-203ENST00000396366 FAM205AQ6ZU69 1335 aa22.96■■□□□ 1.27
FXN-203ENST00000396366 PDE8BO95263 885 aa22.95■■□□□ 1.26
FXN-203ENST00000396366 SLC10A3P09131 477 aa22.95■■□□□ 1.26
FXN-203ENST00000396366 CFAP100Q494V2 611 aa22.95■■□□□ 1.26
FXN-203ENST00000396366 FBXO33Q7Z6M2 555 aa22.95■■□□□ 1.26
FXN-203ENST00000396366 MTMR14Q8NCE2 650 aa22.95■■□□□ 1.26
FXN-203ENST00000396366 PAPPA2Q9BXP8 1791 aa22.95■■□□□ 1.26
FXN-203ENST00000396366 API5Q9BZZ5 524 aaKnown RBP22.95■■□□□ 1.26
FXN-203ENST00000396366 FKBP1BP68106 108 aa22.94■■□□□ 1.26
FXN-203ENST00000396366 PRKG1Q13976 671 aa22.94■■□□□ 1.26
FXN-203ENST00000396366 MFSD14BQ5SR56 506 aa22.94■■□□□ 1.26
FXN-203ENST00000396366 FZD1Q9UP38 647 aa22.94■■□□□ 1.26
FXN-203ENST00000396366 CLRN2A0PK11 232 aa22.93■■□□□ 1.26
FXN-203ENST00000396366 UBTFL1P0CB47 393 aaPredicted RBP22.93■■□□□ 1.26
FXN-203ENST00000396366 BCAMP50895 628 aa22.93■■□□□ 1.26
FXN-203ENST00000396366 PTPN12Q05209 780 aaKnown RBP22.93■■□□□ 1.26
FXN-203ENST00000396366 TTLL12Q14166 644 aaPredicted RBP22.93■■□□□ 1.26
FXN-203ENST00000396366 GRIK5Q16478 980 aa22.93■■□□□ 1.26
FXN-203ENST00000396366 DIEXFQ68CQ4 756 aaKnown RBP22.93■■□□□ 1.26
FXN-203ENST00000396366 RASAL3Q86YV0 1011 aa22.93■■□□□ 1.26
FXN-203ENST00000396366 APOBEC3FQ8IUX4 373 aaKnown RBP22.93■■□□□ 1.26
FXN-203ENST00000396366 SPDYE2BA6NHP3 402 aa22.92■■□□□ 1.26
FXN-203ENST00000396366 EYA2O00167 538 aa22.92■■□□□ 1.26
FXN-203ENST00000396366 SPDYE6P0CI01 402 aa22.92■■□□□ 1.26
FXN-203ENST00000396366 RBM5P52756 815 aaKnown RBP eCLIP22.92■■□□□ 1.26
FXN-203ENST00000396366 CSRNP1Q96S65 589 aa22.92■■□□□ 1.26
FXN-203ENST00000396366 DEFB129Q9H1M3 183 aa22.92■■□□□ 1.26
FXN-203ENST00000396366 TNNQ9UQP3 1299 aa22.92■■□□□ 1.26
FXN-203ENST00000396366 LRRFIP2Q9Y608 721 aaKnown RBP22.92■■□□□ 1.26
FXN-203ENST00000396366 CASP8AP2Q9UKL3 1982 aa22.91■■□□□ 1.26
FXN-203ENST00000396366 CA12O43570 354 aa22.91■■□□□ 1.26
FXN-203ENST00000396366 CHAF1AQ13111 956 aaPredicted RBP22.91■■□□□ 1.26
FXN-203ENST00000396366 ATG9AQ7Z3C6 839 aa22.91■■□□□ 1.26
FXN-203ENST00000396366 VPS37DQ86XT2 251 aa22.91■■□□□ 1.26
FXN-203ENST00000396366 MEIS3Q99687 375 aa22.91■■□□□ 1.26
FXN-203ENST00000396366 TTF2Q9UNY4 1162 aaKnown RBP22.91■■□□□ 1.26
FXN-203ENST00000396366 ECM29Q5VYK3 1845 aa22.9■■□□□ 1.26
FXN-203ENST00000396366 BCAR3O75815 825 aa22.9■■□□□ 1.26
FXN-203ENST00000396366 FGFR2P21802 821 aa22.9■■□□□ 1.26
FXN-203ENST00000396366 SIL1Q9H173 461 aa22.9■■□□□ 1.26
FXN-203ENST00000396366 NF2P35240 595 aa22.89■■□□□ 1.25
FXN-203ENST00000396366 CAVIN4Q5BKX8 364 aa22.89■■□□□ 1.25
FXN-203ENST00000396366 VEZTQ9HBM0 779 aa22.89■■□□□ 1.25
FXN-203ENST00000396366 RNF186Q9NXI6 227 aa22.89■■□□□ 1.25
FXN-203ENST00000396366 TRPA1O75762 1119 aa22.88■■□□□ 1.25
FXN-203ENST00000396366 PUM3Q15397 648 aaKnown RBP22.88■■□□□ 1.25
FXN-203ENST00000396366 ARHGAP45Q92619 1136 aa22.88■■□□□ 1.25
FXN-203ENST00000396366 MYO1BO43795 1136 aa22.87■■□□□ 1.25
FXN-203ENST00000396366 FRAT2O75474 233 aaPredicted RBP22.87■■□□□ 1.25
FXN-203ENST00000396366 HNRNPUQ00839 825 aaKnown RBP eCLIP22.87■■□□□ 1.25
FXN-203ENST00000396366 MKRN3Q13064 507 aaKnown RBP22.87■■□□□ 1.25
FXN-203ENST00000396366 INTS3Q68E01 1043 aaKnown RBP22.87■■□□□ 1.25
FXN-203ENST00000396366 TDRD3Q9H7E2 651 aaKnown RBP22.87■■□□□ 1.25
FXN-203ENST00000396366 ANGEL1Q9UNK9 670 aaKnown RBP22.87■■□□□ 1.25
FXN-203ENST00000396366 PA2G4Q9UQ80 394 aaKnown RBP22.87■■□□□ 1.25
FXN-203ENST00000396366 KIF16BQ96L93 1317 aa22.86■■□□□ 1.25
FXN-203ENST00000396366 ARAP2Q8WZ64 1704 aa22.86■■□□□ 1.25
FXN-203ENST00000396366 IFIT1P09914 478 aaKnown RBP22.86■■□□□ 1.25
FXN-203ENST00000396366 FRAT1Q92837 279 aaPredicted RBP22.86■■□□□ 1.25
FXN-203ENST00000396366 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.86■■□□□ 1.25
FXN-203ENST00000396366 SERPINA10Q9UK55 444 aa22.86■■□□□ 1.25
FXN-203ENST00000396366 AKAP11Q9UKA4 1901 aa22.86■■□□□ 1.25
FXN-203ENST00000396366 SSC5DA1L4H1 1573 aa22.85■■□□□ 1.25
FXN-203ENST00000396366 TRIM27P14373 513 aa22.85■■□□□ 1.25
FXN-203ENST00000396366 CRKP46108 304 aa22.85■■□□□ 1.25
FXN-203ENST00000396366 NBPF12Q5TAG4 269 aaPredicted RBP22.85■■□□□ 1.25
FXN-203ENST00000396366 ARMC9Q7Z3E5 817 aa22.85■■□□□ 1.25
FXN-203ENST00000396366 DZIP1LQ8IYY4 767 aaKnown RBP22.85■■□□□ 1.25
FXN-203ENST00000396366 ZNF70Q9UC06 446 aaPredicted RBP22.85■■□□□ 1.25
FXN-203ENST00000396366 RASA3Q14644 834 aa22.84■■□□□ 1.25
FXN-203ENST00000396366 LDLRAD1Q5T700 205 aa22.84■■□□□ 1.25
FXN-203ENST00000396366 LPIN2Q92539 896 aa22.84■■□□□ 1.25
FXN-203ENST00000396366 ABHD8Q96I13 439 aa22.84■■□□□ 1.25
FXN-203ENST00000396366 COL1A1P02452 1464 aaPredicted RBP22.84■■□□□ 1.25
FXN-203ENST00000396366 CIAO1O76071 339 aa22.83■■□□□ 1.25
FXN-203ENST00000396366 SLC5A1P13866 664 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms