RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 LNPKQ9C0E8 428 aa26.04■■□□□ 1.76
FXN-202ENST00000396364 TLR7Q9NYK1 1049 aaKnown RBP26.04■■□□□ 1.76
FXN-202ENST00000396364 PDS5AQ29RF7 1337 aaKnown RBP26.04■■□□□ 1.76
FXN-202ENST00000396364 KDM2BQ8NHM5 1336 aa26.04■■□□□ 1.76
FXN-202ENST00000396364 ZGPATQ8N5A5 531 aaKnown RBP26.03■■□□□ 1.76
FXN-202ENST00000396364 ECHDC1Q9NTX5 307 aa26.03■■□□□ 1.76
FXN-202ENST00000396364 IQSEC3Q9UPP2 1182 aaPredicted RBP26.03■■□□□ 1.76
FXN-202ENST00000396364 GJA3Q9Y6H8 435 aa26.03■■□□□ 1.76
FXN-202ENST00000396364 FAM205AQ6ZU69 1335 aa26.03■■□□□ 1.76
FXN-202ENST00000396364 GLTPD2A6NH11 291 aa26.02■■□□□ 1.76
FXN-202ENST00000396364 ERC2O15083 957 aa26.02■■□□□ 1.76
FXN-202ENST00000396364 RPS12P25398 132 aaKnown RBP26.02■■□□□ 1.76
FXN-202ENST00000396364 FKBP1AP62942 108 aaKnown RBP26.02■■□□□ 1.76
FXN-202ENST00000396364 CHAF1AQ13111 956 aaPredicted RBP26.02■■□□□ 1.76
FXN-202ENST00000396364 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.02■■□□□ 1.76
FXN-202ENST00000396364 TTC41PQ6P2S7 1318 aa26.02■■□□□ 1.76
FXN-202ENST00000396364 SCN9AQ15858 1988 aa26.02■■□□□ 1.76
FXN-202ENST00000396364 PSMD14O00487 310 aa26.01■■□□□ 1.75
FXN-202ENST00000396364 ZNF541Q9H0D2 1346 aa26.01■■□□□ 1.75
FXN-202ENST00000396364 VIL1P09327 827 aaKnown RBP26■■□□□ 1.75
FXN-202ENST00000396364 MX1P20591 662 aa26■■□□□ 1.75
FXN-202ENST00000396364 MMP14P50281 582 aa26■■□□□ 1.75
FXN-202ENST00000396364 RASGRF1Q13972 1273 aa26■■□□□ 1.75
FXN-202ENST00000396364 RSBN1LQ6PCB5 846 aaPredicted RBP26■■□□□ 1.75
FXN-202ENST00000396364 SPATA5Q8NB90 893 aa26■■□□□ 1.75
FXN-202ENST00000396364 AGBL3Q8NEM8 1001 aa26■■□□□ 1.75
FXN-202ENST00000396364 ATP5JP18859 108 aa25.99■■□□□ 1.75
FXN-202ENST00000396364 DACT2Q5SW24 774 aa25.99■■□□□ 1.75
FXN-202ENST00000396364 LMOD1P29536 600 aaPredicted RBP25.98■■□□□ 1.75
FXN-202ENST00000396364 MFSD14BQ5SR56 506 aa25.98■■□□□ 1.75
FXN-202ENST00000396364 SPTY2D1Q68D10 685 aaPredicted RBP25.98■■□□□ 1.75
FXN-202ENST00000396364 KCNQ5Q9NR82 932 aa25.98■■□□□ 1.75
FXN-202ENST00000396364 SUGT1Q9Y2Z0 365 aa25.98■■□□□ 1.75
FXN-202ENST00000396364 DPF2Q92785 391 aa25.97■■□□□ 1.75
FXN-202ENST00000396364 HMG20BQ9P0W2 317 aa25.97■■□□□ 1.75
FXN-202ENST00000396364 SALL1Q9NSC2 1324 aa25.96■■□□□ 1.75
FXN-202ENST00000396364 IGSF3O75054 1194 aa25.96■■□□□ 1.75
FXN-202ENST00000396364 GLRX3O76003 335 aaKnown RBP25.96■■□□□ 1.75
FXN-202ENST00000396364 DDNO94850 711 aaPredicted RBP25.96■■□□□ 1.75
FXN-202ENST00000396364 MCAMP43121 646 aa25.96■■□□□ 1.75
FXN-202ENST00000396364 TTF1Q15361 905 aaPredicted RBP25.96■■□□□ 1.75
FXN-202ENST00000396364 OGFOD1Q8N543 542 aa25.96■■□□□ 1.75
FXN-202ENST00000396364 HDAC9Q9UKV0 1011 aa25.96■■□□□ 1.75
FXN-202ENST00000396364 MAST3O60307 1309 aa25.95■■□□□ 1.75
FXN-202ENST00000396364 IQCA1LA6NCM1 817 aa25.95■■□□□ 1.74
FXN-202ENST00000396364 C16orf71Q8IYS4 520 aaPredicted RBP25.95■■□□□ 1.74
FXN-202ENST00000396364 JAG2Q9Y219 1238 aa25.95■■□□□ 1.74
FXN-202ENST00000396364 AOX1Q06278 1338 aa25.94■■□□□ 1.74
FXN-202ENST00000396364 L3MBTL3Q96JM7 780 aaPredicted RBP25.94■■□□□ 1.74
FXN-202ENST00000396364 STAP2Q9UGK3 403 aa25.94■■□□□ 1.74
FXN-202ENST00000396364 AKAP11Q9UKA4 1901 aa25.93■■□□□ 1.74
FXN-202ENST00000396364 H7C1D1 291 aa25.93■■□□□ 1.74
FXN-202ENST00000396364 YY1P25490 414 aa25.93■■□□□ 1.74
FXN-202ENST00000396364 GMPSP49915 693 aaPredicted RBP25.93■■□□□ 1.74
FXN-202ENST00000396364 ABCF2Q9UG63 623 aa25.93■■□□□ 1.74
FXN-202ENST00000396364 ZNF646O15015 1829 aaPredicted RBP25.93■■□□□ 1.74
FXN-202ENST00000396364 SCN4AP35499 1836 aa25.93■■□□□ 1.74
FXN-202ENST00000396364 COL1A1P02452 1464 aaPredicted RBP25.92■■□□□ 1.74
FXN-202ENST00000396364 LDHBP07195 334 aaKnown RBP25.92■■□□□ 1.74
FXN-202ENST00000396364 USP17L8P0C7I0 530 aa25.92■■□□□ 1.74
FXN-202ENST00000396364 PDE1AP54750 535 aa25.92■■□□□ 1.74
FXN-202ENST00000396364 SCARF1Q14162 830 aa25.92■■□□□ 1.74
FXN-202ENST00000396364 DNAJC2Q99543 621 aaKnown RBP25.92■■□□□ 1.74
FXN-202ENST00000396364 HAUS7Q99871 368 aa25.92■■□□□ 1.74
FXN-202ENST00000396364 BOLA2Q9H3K6 86 aa25.92■■□□□ 1.74
FXN-202ENST00000396364 SNRKQ9NRH2 765 aa25.92■■□□□ 1.74
FXN-202ENST00000396364 ZBTB12Q9Y330 459 aaPredicted RBP25.92■■□□□ 1.74
FXN-202ENST00000396364 WDR90Q96KV7 1748 aa25.91■■□□□ 1.74
FXN-202ENST00000396364 SALL3Q9BXA9 1300 aa25.91■■□□□ 1.74
FXN-202ENST00000396364 ZAP70P43403 619 aa25.91■■□□□ 1.74
FXN-202ENST00000396364 ERICH6Q7L0X2 663 aa25.91■■□□□ 1.74
FXN-202ENST00000396364 SLF2Q8IX21 1173 aa25.91■■□□□ 1.74
FXN-202ENST00000396364 GPRC5DQ9NZD1 345 aa25.91■■□□□ 1.74
FXN-202ENST00000396364 LRP2BPQ9P2M1 347 aa25.91■■□□□ 1.74
FXN-202ENST00000396364 KIAA0825Q8IV33 1275 aa25.9■■□□□ 1.74
FXN-202ENST00000396364 OTUD7AQ8TE49 926 aaPredicted RBP25.9■■□□□ 1.74
FXN-202ENST00000396364 OSBPL3Q9H4L5 887 aa25.9■■□□□ 1.74
FXN-202ENST00000396364 CNOT7Q9UIV1 285 aaKnown RBP25.9■■□□□ 1.74
FXN-202ENST00000396364 HACL1Q9UJ83 578 aa25.9■■□□□ 1.74
FXN-202ENST00000396364 LRRFIP1Q32MZ4 808 aaKnown RBP25.89■■□□□ 1.74
FXN-202ENST00000396364 TMED8Q6PL24 325 aaPredicted RBP25.89■■□□□ 1.74
FXN-202ENST00000396364 PI16Q6UXB8 463 aa25.89■■□□□ 1.74
FXN-202ENST00000396364 DZIP1Q86YF9 867 aaKnown RBP25.89■■□□□ 1.74
FXN-202ENST00000396364 GMLQ99445 158 aa25.89■■□□□ 1.74
FXN-202ENST00000396364 PAG1Q9NWQ8 432 aa25.89■■□□□ 1.74
FXN-202ENST00000396364 TTF2Q9UNY4 1162 aaKnown RBP25.89■■□□□ 1.74
FXN-202ENST00000396364 VEGFAP15692 232 aaPredicted RBP25.88■■□□□ 1.73
FXN-202ENST00000396364 SCNN1DP51172 638 aa25.88■■□□□ 1.73
FXN-202ENST00000396364 PLEKHM2Q8IWE5 1019 aa25.88■■□□□ 1.73
FXN-202ENST00000396364 MICALL2Q8IY33 904 aa25.88■■□□□ 1.73
FXN-202ENST00000396364 CERS5Q8N5B7 392 aa25.88■■□□□ 1.73
FXN-202ENST00000396364 MXD3Q9BW11 206 aa25.88■■□□□ 1.73
FXN-202ENST00000396364 GPBP1L1Q9HC44 474 aaPredicted RBP25.88■■□□□ 1.73
FXN-202ENST00000396364 F8W031 263 aaPredicted RBP25.87■■□□□ 1.73
FXN-202ENST00000396364 GOLIM4O00461 696 aa25.87■■□□□ 1.73
FXN-202ENST00000396364 CYP2E1P05181 493 aaPredicted RBP25.87■■□□□ 1.73
FXN-202ENST00000396364 GSTO1P78417 241 aa25.87■■□□□ 1.73
FXN-202ENST00000396364 HDLBPQ00341 1268 aaKnown RBP25.87■■□□□ 1.73
FXN-202ENST00000396364 MAP3K12Q12852 859 aa25.87■■□□□ 1.73
FXN-202ENST00000396364 PI4K2BQ8TCG2 481 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms