RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 VEZTQ9HBM0 779 aa20.59■□□□□ 0.89
DDR1-229ENST00000396342 SCAF8Q9UPN6 1271 aaKnown RBP20.59■□□□□ 0.89
DDR1-229ENST00000396342 PTPRCP08575 1304 aa20.58■□□□□ 0.89
DDR1-229ENST00000396342 HIBADHP31937 336 aaKnown RBP20.58■□□□□ 0.89
DDR1-229ENST00000396342 CFAP100Q494V2 611 aa20.58■□□□□ 0.89
DDR1-229ENST00000396342 ZNF594Q96JF6 807 aaPredicted RBP20.58■□□□□ 0.89
DDR1-229ENST00000396342 SPINK5Q9NQ38 1064 aaPredicted RBP20.58■□□□□ 0.89
DDR1-229ENST00000396342 ANGEL1Q9UNK9 670 aaKnown RBP20.58■□□□□ 0.89
DDR1-229ENST00000396342 MTMR14Q8NCE2 650 aa20.57■□□□□ 0.88
DDR1-229ENST00000396342 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.57■□□□□ 0.88
DDR1-229ENST00000396342 HDAC5Q9UQL6 1122 aa20.57■□□□□ 0.88
DDR1-229ENST00000396342 COL1A1P02452 1464 aaPredicted RBP20.56■□□□□ 0.88
DDR1-229ENST00000396342 ALDH1A1P00352 501 aa20.56■□□□□ 0.88
DDR1-229ENST00000396342 INHBEP58166 350 aa20.56■□□□□ 0.88
DDR1-229ENST00000396342 METTL24Q5JXM2 366 aa20.56■□□□□ 0.88
DDR1-229ENST00000396342 MOB2Q70IA6 237 aa20.56■□□□□ 0.88
DDR1-229ENST00000396342 CTU1Q7Z7A3 348 aaKnown RBP20.56■□□□□ 0.88
DDR1-229ENST00000396342 PAPPA2Q9BXP8 1791 aa20.56■□□□□ 0.88
DDR1-229ENST00000396342 SCN9AQ15858 1988 aa20.55■□□□□ 0.88
DDR1-229ENST00000396342 SNAP23O00161 211 aa20.55■□□□□ 0.88
DDR1-229ENST00000396342 IREB2P48200 963 aaKnown RBP20.55■□□□□ 0.88
DDR1-229ENST00000396342 TNNI2P48788 182 aa20.55■□□□□ 0.88
DDR1-229ENST00000396342 MKRN3Q13064 507 aaKnown RBP20.55■□□□□ 0.88
DDR1-229ENST00000396342 PKN2Q16513 984 aaKnown RBP20.55■□□□□ 0.88
DDR1-229ENST00000396342 EPHA10Q5JZY3 1008 aa20.55■□□□□ 0.88
DDR1-229ENST00000396342 MFSD14BQ5SR56 506 aa20.55■□□□□ 0.88
DDR1-229ENST00000396342 OTUD7BQ6GQQ9 843 aa20.55■□□□□ 0.88
DDR1-229ENST00000396342 MYH3P11055 1940 aa20.55■□□□□ 0.88
DDR1-229ENST00000396342 SPDYE2BA6NHP3 402 aa20.54■□□□□ 0.88
DDR1-229ENST00000396342 UNCXA6NJT0 531 aa20.54■□□□□ 0.88
DDR1-229ENST00000396342 SPDYE6P0CI01 402 aa20.54■□□□□ 0.88
DDR1-229ENST00000396342 TBC1D22AQ8WUA7 517 aa20.54■□□□□ 0.88
DDR1-229ENST00000396342 SUCLG2Q96I99 432 aa20.54■□□□□ 0.88
DDR1-229ENST00000396342 CLRN2A0PK11 232 aa20.53■□□□□ 0.88
DDR1-229ENST00000396342 MANSC4A6NHS7 340 aaPredicted RBP20.53■□□□□ 0.88
DDR1-229ENST00000396342 PTPN12Q05209 780 aaKnown RBP20.53■□□□□ 0.88
DDR1-229ENST00000396342 SERPINA10Q9UK55 444 aa20.53■□□□□ 0.88
DDR1-229ENST00000396342 TTF2Q9UNY4 1162 aaKnown RBP20.53■□□□□ 0.88
DDR1-229ENST00000396342 JAG2Q9Y219 1238 aa20.53■□□□□ 0.88
DDR1-229ENST00000396342 IFIT1P09914 478 aaKnown RBP20.52■□□□□ 0.88
DDR1-229ENST00000396342 NBPF7P0C2Y1 421 aaPredicted RBP20.52■□□□□ 0.88
DDR1-229ENST00000396342 TM4SF4P48230 202 aa20.52■□□□□ 0.88
DDR1-229ENST00000396342 CERS5Q8N5B7 392 aa20.52■□□□□ 0.88
DDR1-229ENST00000396342 MRPL50Q8N5N7 158 aaKnown RBP20.52■□□□□ 0.88
DDR1-229ENST00000396342 ZBED3Q96IU2 234 aaPredicted RBP20.52■□□□□ 0.88
DDR1-229ENST00000396342 BICC1Q9H694 974 aaKnown RBP20.52■□□□□ 0.88
DDR1-229ENST00000396342 TMOD2Q9NZR1 351 aa20.52■□□□□ 0.88
DDR1-229ENST00000396342 FAM205AQ6ZU69 1335 aa20.52■□□□□ 0.87
DDR1-229ENST00000396342 TBC1D8O95759 1140 aa20.51■□□□□ 0.87
DDR1-229ENST00000396342 GYG1P46976 350 aa20.51■□□□□ 0.87
DDR1-229ENST00000396342 TDRD7Q8NHU6 1098 aaKnown RBP20.51■□□□□ 0.87
DDR1-229ENST00000396342 SMC4Q9NTJ3 1288 aa20.51■□□□□ 0.87
DDR1-229ENST00000396342 CACNA1FO60840 1977 aa20.5■□□□□ 0.87
DDR1-229ENST00000396342 WDHD1O75717 1129 aaPredicted RBP20.5■□□□□ 0.87
DDR1-229ENST00000396342 ZBTB48P10074 688 aaPredicted RBP20.5■□□□□ 0.87
DDR1-229ENST00000396342 ALDH1L2Q3SY69 923 aa20.5■□□□□ 0.87
DDR1-229ENST00000396342 SPRYD7Q5W111 196 aa20.5■□□□□ 0.87
DDR1-229ENST00000396342 HOOK2Q96ED9 719 aa20.5■□□□□ 0.87
DDR1-229ENST00000396342 UTYO14607 1347 aa20.5■□□□□ 0.87
DDR1-229ENST00000396342 CHAF1AQ13111 956 aaPredicted RBP20.49■□□□□ 0.87
DDR1-229ENST00000396342 LDLRAD1Q5T700 205 aa20.49■□□□□ 0.87
DDR1-229ENST00000396342 FAM84BQ96KN1 310 aaPredicted RBP20.49■□□□□ 0.87
DDR1-229ENST00000396342 PRMT6Q96LA8 375 aaPredicted RBP20.49■□□□□ 0.87
DDR1-229ENST00000396342 MAST3O60307 1309 aa20.49■□□□□ 0.87
DDR1-229ENST00000396342 FKTNO75072 461 aa20.48■□□□□ 0.87
DDR1-229ENST00000396342 RGS19P49795 217 aa20.48■□□□□ 0.87
DDR1-229ENST00000396342 RASA3Q14644 834 aa20.48■□□□□ 0.87
DDR1-229ENST00000396342 ANKRD13AQ8IZ07 590 aa20.48■□□□□ 0.87
DDR1-229ENST00000396342 PUS3Q9BZE2 481 aaKnown RBP20.48■□□□□ 0.87
DDR1-229ENST00000396342 RIPOR2Q9Y4F9 1068 aa20.48■□□□□ 0.87
DDR1-229ENST00000396342 IRS2Q9Y4H2 1338 aa20.48■□□□□ 0.87
DDR1-229ENST00000396342 SPEF2Q9C093 1822 aa20.48■□□□□ 0.87
DDR1-229ENST00000396342 GPR25O00155 361 aa20.47■□□□□ 0.87
DDR1-229ENST00000396342 PDE8BO95263 885 aa20.47■□□□□ 0.87
DDR1-229ENST00000396342 CT47B1P0C2W7 299 aaPredicted RBP20.47■□□□□ 0.87
DDR1-229ENST00000396342 PUM3Q15397 648 aaKnown RBP20.47■□□□□ 0.87
DDR1-229ENST00000396342 MAP3K11Q16584 847 aa20.47■□□□□ 0.87
DDR1-229ENST00000396342 RABL6Q3YEC7 729 aaPredicted RBP20.47■□□□□ 0.87
DDR1-229ENST00000396342 NOM1Q5C9Z4 860 aaKnown RBP20.47■□□□□ 0.87
DDR1-229ENST00000396342 ZNF296Q8WUU4 475 aaPredicted RBP20.47■□□□□ 0.87
DDR1-229ENST00000396342 SSH1Q8WYL5 1049 aa20.47■□□□□ 0.87
DDR1-229ENST00000396342 TEKT1Q969V4 418 aa20.47■□□□□ 0.87
DDR1-229ENST00000396342 PSME4Q14997 1843 aa20.47■□□□□ 0.87
DDR1-229ENST00000396342 ZNF521Q96K83 1311 aa20.47■□□□□ 0.87
DDR1-229ENST00000396342 UBTFL1P0CB47 393 aaPredicted RBP20.46■□□□□ 0.87
DDR1-229ENST00000396342 SLC5A1P13866 664 aa20.46■□□□□ 0.87
DDR1-229ENST00000396342 DZIP1LQ8IYY4 767 aaKnown RBP20.46■□□□□ 0.87
DDR1-229ENST00000396342 GNL3LQ9NVN8 582 aaKnown RBP20.46■□□□□ 0.87
DDR1-229ENST00000396342 ZNF70Q9UC06 446 aaPredicted RBP20.46■□□□□ 0.87
DDR1-229ENST00000396342 POLR2AP24928 1970 aaKnown RBP20.46■□□□□ 0.87
DDR1-229ENST00000396342 CRKP46108 304 aa20.45■□□□□ 0.86
DDR1-229ENST00000396342 HDLBPQ00341 1268 aaKnown RBP20.45■□□□□ 0.86
DDR1-229ENST00000396342 SLFN5Q08AF3 891 aa20.45■□□□□ 0.86
DDR1-229ENST00000396342 SPDYE2Q495Y8 402 aa20.45■□□□□ 0.86
DDR1-229ENST00000396342 TDRD3Q9H7E2 651 aaKnown RBP20.45■□□□□ 0.86
DDR1-229ENST00000396342 CSADQ9Y600 493 aa20.45■□□□□ 0.86
DDR1-229ENST00000396342 ARHGEF6Q15052 776 aa20.44■□□□□ 0.86
DDR1-229ENST00000396342 NBPF12Q5TAG4 269 aaPredicted RBP20.44■□□□□ 0.86
DDR1-229ENST00000396342 FBXO33Q7Z6M2 555 aa20.44■□□□□ 0.86
DDR1-229ENST00000396342 WNK4Q96J92 1243 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms