RNA–Protein interactions for RNA: ENST00000395813.5

CAST-207, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 4,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-207ENST00000395813 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.7□□□□□ -1.5
CAST-207ENST00000395813 VPS45Q9NRW7 570 aa5.7□□□□□ -1.5
CAST-207ENST00000395813 PDRG1Q9NUG6 133 aa5.7□□□□□ -1.5
CAST-207ENST00000395813 SEL1LQ9UBV2 794 aa5.7□□□□□ -1.5
CAST-207ENST00000395813 ANGPTL3Q9Y5C1 460 aa5.7□□□□□ -1.5
CAST-207ENST00000395813 RHOBTB3O94955 611 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 PLA2G4AP47712 749 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 SFSWAPQ12872 951 aaKnown RBP5.69□□□□□ -1.5
CAST-207ENST00000395813 CCDC30Q5VVM6 783 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 CDC37L1Q7L3B6 337 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 MTERF4Q7Z6M4 381 aaKnown RBP5.69□□□□□ -1.5
CAST-207ENST00000395813 HOMER1Q86YM7 354 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 NELL1Q92832 810 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 BHMTQ93088 406 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 BARD1Q99728 777 aaKnown RBP5.69□□□□□ -1.5
CAST-207ENST00000395813 TTLL13PA6NNM8 815 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 B3GALNT1O75752 331 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 SLC4A1P02730 911 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 G3BP1Q13283 466 aaKnown RBP eCLIP5.69□□□□□ -1.5
CAST-207ENST00000395813 NYAP1Q6ZVC0 841 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 OSCARQ8IYS5 282 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 GABPB2Q8TAK5 448 aaPredicted RBP5.69□□□□□ -1.5
CAST-207ENST00000395813 C17orf50Q8WW18 174 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 TEKT1Q969V4 418 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 FAM126AQ9BYI3 521 aaPredicted RBP5.69□□□□□ -1.5
CAST-207ENST00000395813 KCTD5Q9NXV2 234 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 FAM221BA6H8Z2 402 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 VPS72Q15906 364 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 ZC3H12AQ5D1E8 599 aaKnown RBP5.69□□□□□ -1.5
CAST-207ENST00000395813 ZC3H12BQ5HYM0 836 aaKnown RBP5.69□□□□□ -1.5
CAST-207ENST00000395813 C6orf118Q5T5N4 469 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 FAM180BQ6P0A1 224 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 ZBTB46Q86UZ6 589 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 DDX42Q86XP3 938 aaKnown RBP eCLIP5.69□□□□□ -1.5
CAST-207ENST00000395813 CCDC65Q8IXS2 484 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 GAS2L2Q8NHY3 880 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 TTC8Q8TAM2 541 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 ZNF496Q96IT1 587 aaPredicted RBP5.69□□□□□ -1.5
CAST-207ENST00000395813 TSPYL2Q9H2G4 693 aaPredicted RBP5.69□□□□□ -1.5
CAST-207ENST00000395813 SEPT11Q9NVA2 429 aaKnown RBP5.69□□□□□ -1.5
CAST-207ENST00000395813 CPSF2Q9P2I0 782 aaKnown RBP5.69□□□□□ -1.5
CAST-207ENST00000395813 KNSTRNQ9Y448 316 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 USP17L3A6NCW0 530 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 USP17L4A6NCW7 530 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 RASA4O43374 803 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 DESP17661 470 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 HSD17B7P56937 341 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 MAP3K9P80192 1104 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 ANKRD45Q5TZF3 282 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 USP17L2Q6R6M4 530 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 USP17L1Q7RTZ2 530 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 RIC3Q7Z5B4 369 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 GTF3C2Q8WUA4 911 aaPredicted RBP5.69□□□□□ -1.5
CAST-207ENST00000395813 SH3KBP1Q96B97 665 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 TMX1Q9H3N1 280 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 TSPY26PQ9H489 355 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 MKS1Q9NXB0 559 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 SNTG2Q9NY99 539 aa5.69□□□□□ -1.5
CAST-207ENST00000395813 RBM5P52756 815 aaKnown RBP eCLIP5.68□□□□□ -1.5
CAST-207ENST00000395813 PPP4R3AQ6IN85 833 aa5.68□□□□□ -1.5
CAST-207ENST00000395813 SVIPQ8NHG7 77 aa5.68□□□□□ -1.5
CAST-207ENST00000395813 CABLES1Q8TDN4 633 aa5.68□□□□□ -1.5
CAST-207ENST00000395813 HNRNPLLQ8WVV9 542 aaKnown RBP5.68□□□□□ -1.5
CAST-207ENST00000395813 RRN3Q9NYV6 651 aa5.68□□□□□ -1.5
CAST-207ENST00000395813 MCM8Q9UJA3 840 aa5.68□□□□□ -1.5
CAST-207ENST00000395813 ZNF180Q9UJW8 692 aa5.68□□□□□ -1.5
CAST-207ENST00000395813 DMTF1Q9Y222 760 aa5.68□□□□□ -1.5
CAST-207ENST00000395813 FERP16591 822 aa5.68□□□□□ -1.5
CAST-207ENST00000395813 ACBD5Q5T8D3 534 aaPredicted RBP5.68□□□□□ -1.5
CAST-207ENST00000395813 CFAP161Q6P656 301 aa5.68□□□□□ -1.5
CAST-207ENST00000395813 OTUD6AQ7L8S5 288 aa5.68□□□□□ -1.5
CAST-207ENST00000395813 MSANTD4Q8NCY6 345 aa5.68□□□□□ -1.5
CAST-207ENST00000395813 CTNNBL1Q8WYA6 563 aaPredicted RBP5.68□□□□□ -1.5
CAST-207ENST00000395813 DNAJC7Q99615 494 aa5.68□□□□□ -1.5
CAST-207ENST00000395813 TMOD4Q9NZQ9 345 aa5.68□□□□□ -1.5
CAST-207ENST00000395813 TTLL3Q9Y4R7 772 aa5.68□□□□□ -1.5
CAST-207ENST00000395813 F8W031 263 aaPredicted RBP5.68□□□□□ -1.5
CAST-207ENST00000395813 ATP9BO43861 1147 aa5.68□□□□□ -1.5
CAST-207ENST00000395813 GFPT2O94808 682 aa5.68□□□□□ -1.5
CAST-207ENST00000395813 SASH1O94885 1247 aa5.68□□□□□ -1.5
CAST-207ENST00000395813 VIMP08670 466 aaKnown RBP5.68□□□□□ -1.5
CAST-207ENST00000395813 MASP1P48740 699 aa5.68□□□□□ -1.5
CAST-207ENST00000395813 EXOSC10Q01780 885 aaKnown RBP5.68□□□□□ -1.5
CAST-207ENST00000395813 RASEFQ8IZ41 740 aa5.68□□□□□ -1.5
CAST-207ENST00000395813 POLR3CQ9BUI4 534 aaPredicted RBP5.68□□□□□ -1.5
CAST-207ENST00000395813 QTRT2Q9H974 415 aaKnown RBP5.68□□□□□ -1.5
CAST-207ENST00000395813 ACAD8Q9UKU7 415 aa5.68□□□□□ -1.5
CAST-207ENST00000395813 CEP131Q9UPN4 1083 aa5.68□□□□□ -1.5
CAST-207ENST00000395813 LIMCH1Q9UPQ0 1083 aa5.68□□□□□ -1.5
CAST-207ENST00000395813 RASGRP1O95267 797 aa5.67□□□□□ -1.5
CAST-207ENST00000395813 VCAM1P19320 739 aa5.67□□□□□ -1.5
CAST-207ENST00000395813 PDXDC1Q6P996 788 aa5.67□□□□□ -1.5
CAST-207ENST00000395813 RELTQ969Z4 430 aa5.67□□□□□ -1.5
CAST-207ENST00000395813 PGBD4Q96DM1 585 aa5.67□□□□□ -1.5
CAST-207ENST00000395813 CLMNQ96JQ2 1002 aa5.67□□□□□ -1.5
CAST-207ENST00000395813 RMDN2Q96LZ7 410 aa5.67□□□□□ -1.5
CAST-207ENST00000395813 SETDB2Q96T68 719 aa5.67□□□□□ -1.5
CAST-207ENST00000395813 CENPJQ9HC77 1338 aaPredicted RBP5.67□□□□□ -1.5
CAST-207ENST00000395813 RTCAO00442 366 aaKnown RBP5.67□□□□□ -1.5
CAST-207ENST00000395813 MYBP10242 640 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms